Literature DB >> 35524686

Protist feeding patterns and growth rate are related to their predatory impacts on soil bacterial communities.

Nathalie Amacker1, Zhilei Gao1, Jie Hu1,2, Alexandre L C Jousset1, George A Kowalchuk1, Stefan Geisen3.   

Abstract

Predatory protists are major consumers of soil micro-organisms. By selectively feeding on their prey, they can shape soil microbiome composition and functions. While different protists are known to show diverging impacts, it remains impossible to predict a priori the effect of a given species. Various protist traits including phylogenetic distance, growth rate and volume have been previously linked to the predatory impact of protists. Closely related protists, however, also showed distinct prey choices which could mirror specificity in their dietary niche. We, therefore, aimed to estimate the dietary niche breadth and overlap of eight protist isolates on 20 bacterial species in plate assays. To assess the informative value of previously suggested and newly proposed (feeding-related) protist traits, we related them to the impacts of predation of each protist on a protist-free soil bacterial community in a soil microcosm via 16S rRNA gene amplicon sequencing. We could demonstrate that each protist showed a distinct feeding pattern in vitro. Further, the assayed protist feeding patterns and growth rates correlated well with the observed predatory impacts on the structure of soil bacterial communities. We thus conclude that in vitro screening has the potential to inform on the specific predatory impact of selected protists.
© The Author(s) 2022. Published by Oxford University Press on behalf of FEMS.

Entities:  

Keywords:  zzm321990 in vitro assay; dietary niche; microbes; microcosm; predation; soil

Mesh:

Substances:

Year:  2022        PMID: 35524686      PMCID: PMC9126823          DOI: 10.1093/femsec/fiac057

Source DB:  PubMed          Journal:  FEMS Microbiol Ecol        ISSN: 0168-6496            Impact factor:   4.519


  40 in total

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8.  Predators promote defence of rhizosphere bacterial populations by selective feeding on non-toxic cheaters.

Authors:  Alexandre Jousset; Laurène Rochat; Maria Péchy-Tarr; Christoph Keel; Stefan Scheu; Michael Bonkowski
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9.  Biocontrol Traits Correlate With Resistance to Predation by Protists in Soil Pseudomonads.

Authors:  Nathalie Amacker; Zhilei Gao; Betina C Agaras; Ellen Latz; George A Kowalchuk; Claudio F Valverde; Alexandre Jousset; Simone Weidner
Journal:  Front Microbiol       Date:  2020-12-15       Impact factor: 5.640

10.  The global-scale distributions of soil protists and their contributions to belowground systems.

Authors:  Angela M Oliverio; Stefan Geisen; Manuel Delgado-Baquerizo; Fernando T Maestre; Benjamin L Turner; Noah Fierer
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