Literature DB >> 35524125

RNA Interference (RNAi ) as a Tool for High-Resolution Phenotypic Screening of the Pathogenic Yeast Candida glabrata.

Andreas Tsouris1, Joseph Schacherer1,2, Olena P Ishchuk3.   

Abstract

After its discovery RNA interference (RNAi) has become a powerful tool to study gene functions in different organisms. RNAi has been applied at genome-wide scale and can be nowadays performed using high-throughput automated systems (robotics). The simplest RNAi process requires the expression of two genes (Dicer and Argonaute) to function. To initiate the silencing, constructs generating either double-strand RNA or antisense RNA are required. Recently, RNAi was reconstituted by expressing Saccharomyces castellii genes in the human pathogenic yeast Candida glabrata and was used to identify new genes related to the virulence of this pathogen.In this chapter, we describe a method to make the C. glabrata pathogenic yeast competent for RNAi and to use RNA silencing as a tool for low- or high-resolution phenotypic screening in this species.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Candida glabrata; Functional genomics; Pathogenic yeast; RNAi; Yeast

Mesh:

Substances:

Year:  2022        PMID: 35524125     DOI: 10.1007/978-1-0716-2257-5_18

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  59 in total

1.  Cellular RNA-dependent RNA polymerase involved in posttranscriptional gene silencing has two distinct activity modes.

Authors:  Eugene V Makeyev; Dennis H Bamford
Journal:  Mol Cell       Date:  2002-12       Impact factor: 17.970

Review 2.  RNase III enzymes and the initiation of gene silencing.

Authors:  Michelle A Carmell; Gregory J Hannon
Journal:  Nat Struct Mol Biol       Date:  2004-03       Impact factor: 15.369

Review 3.  Dicing and slicing: the core machinery of the RNA interference pathway.

Authors:  Scott M Hammond
Journal:  FEBS Lett       Date:  2005-09-27       Impact factor: 4.124

4.  Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.

Authors:  A Fire; S Xu; M K Montgomery; S A Kostas; S E Driver; C C Mello
Journal:  Nature       Date:  1998-02-19       Impact factor: 49.962

5.  On the role of RNA amplification in dsRNA-triggered gene silencing.

Authors:  T Sijen; J Fleenor; F Simmer; K L Thijssen; S Parrish; L Timmons; R H Plasterk; A Fire
Journal:  Cell       Date:  2001-11-16       Impact factor: 41.582

6.  Molecular characterization of a mouse cDNA encoding Dicer, a ribonuclease III ortholog involved in RNA interference.

Authors:  Rhonda H Nicholson; Allen W Nicholson
Journal:  Mamm Genome       Date:  2002-02       Impact factor: 2.957

7.  Role for a bidentate ribonuclease in the initiation step of RNA interference.

Authors:  E Bernstein; A A Caudy; S M Hammond; G J Hannon
Journal:  Nature       Date:  2001-01-18       Impact factor: 49.962

8.  Gene silencing in Neurospora crassa requires a protein homologous to RNA-dependent RNA polymerase.

Authors:  C Cogoni; G Macino
Journal:  Nature       Date:  1999-05-13       Impact factor: 49.962

Review 9.  The many faces of Dicer: the complexity of the mechanisms regulating Dicer gene expression and enzyme activities.

Authors:  Anna Kurzynska-Kokorniak; Natalia Koralewska; Maria Pokornowska; Anna Urbanowicz; Aleksander Tworak; Agnieszka Mickiewicz; Marek Figlerowicz
Journal:  Nucleic Acids Res       Date:  2015-04-16       Impact factor: 16.971

Review 10.  Molecular mechanisms of Dicer: endonuclease and enzymatic activity.

Authors:  Min-Sun Song; John J Rossi
Journal:  Biochem J       Date:  2017-05-04       Impact factor: 3.857

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.