Literature DB >> 35524050

Inducing Global Expression of Actinobacterial Biosynthetic Gene Clusters.

Meghan A Pepler1, Xiafei Zhang1, Marie A Elliot2.   

Abstract

Bacteria produce an impressive array of bioactive specialized metabolites, with Streptomyces (and the actinobacteria more generally) being unusually diverse and prolific producers. However, the biosynthetic potential of these organisms has yet to be fully explored, as many of the biosynthetic gene clusters that direct the synthesis of these natural products are transcriptionally silent under laboratory growth conditions. Here, we describe strategies that can be employed to broadly stimulate the expression of biosynthetic gene clusters in Streptomyces and their relatives, follow the transcription of these genes, and assess the antimicrobial activity of the resulting molecules.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Antibiotic; Bioassay; Biosynthetic gene cluster; Gene expression; Genetic engineering; Streptomyces; Transcription regulator

Mesh:

Substances:

Year:  2022        PMID: 35524050     DOI: 10.1007/978-1-0716-2273-5_9

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  20 in total

Review 1.  Myxobacterial secondary metabolites: bioactivities and modes-of-action.

Authors:  Kira J Weissman; Rolf Müller
Journal:  Nat Prod Rep       Date:  2010-06-03       Impact factor: 13.423

Review 2.  Unlocking the trove of metabolic treasures: activating silent biosynthetic gene clusters in bacteria and fungi.

Authors:  Xiafei Zhang; Marie A Elliot
Journal:  Curr Opin Microbiol       Date:  2019-04-15       Impact factor: 7.934

3.  An Engineered Allele of afsQ1 Facilitates the Discovery and Investigation of Cryptic Natural Products.

Authors:  Martin Daniel-Ivad; Nabeela Hameed; Stephanie Tan; Rachna Dhanjal; Daniel Socko; Patricia Pak; Tomas Gverzdys; Marie A Elliot; Justin R Nodwell
Journal:  ACS Chem Biol       Date:  2017-01-19       Impact factor: 5.100

4.  Bioactivity-HiTES Unveils Cryptic Antibiotics Encoded in Actinomycete Bacteria.

Authors:  Kyuho Moon; Fei Xu; Chen Zhang; Mohammad R Seyedsayamdost
Journal:  ACS Chem Biol       Date:  2019-03-19       Impact factor: 5.100

5.  Chemical perturbation of secondary metabolism demonstrates important links to primary metabolism.

Authors:  Arryn Craney; Cory Ozimok; Sheila Marie Pimentel-Elardo; Alfredo Capretta; Justin R Nodwell
Journal:  Chem Biol       Date:  2012-08-24

Review 6.  Antibiotics from myxobacteria.

Authors:  Till F Schäberle; Friederike Lohr; Alexander Schmitz; Gabriele M König
Journal:  Nat Prod Rep       Date:  2014-05-19       Impact factor: 13.423

7.  The Novel Transcriptional Regulator LmbU Promotes Lincomycin Biosynthesis through Regulating Expression of Its Target Genes in Streptomyces lincolnensis.

Authors:  Bingbing Hou; Yanwei Lin; Haizhen Wu; Meijin Guo; Hrvoje Petkovic; Liyuan Tao; Xiaoyu Zhu; Jiang Ye; Huizhan Zhang
Journal:  J Bacteriol       Date:  2017-12-20       Impact factor: 3.490

Review 8.  Antibiotics as signal molecules.

Authors:  Diego Romero; Matthew F Traxler; Daniel López; Roberto Kolter
Journal:  Chem Rev       Date:  2011-07-25       Impact factor: 60.622

9.  Silencing cryptic specialized metabolism in Streptomyces by the nucleoid-associated protein Lsr2.

Authors:  Emma J Gehrke; Xiafei Zhang; Sheila M Pimentel-Elardo; Andrew R Johnson; Christiaan A Rees; Stephanie E Jones; Sebastian S Gehrke; Sonya Turvey; Suzanne Boursalie; Jane E Hill; Erin E Carlson; Justin R Nodwell; Marie A Elliot
Journal:  Elife       Date:  2019-06-19       Impact factor: 8.140

10.  Crp is a global regulator of antibiotic production in streptomyces.

Authors:  Chan Gao; David Mulder; Charles Yin; Marie A Elliot
Journal:  mBio       Date:  2012-12-11       Impact factor: 7.867

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