| Literature DB >> 35517045 |
Sara Redenšek1, Tilen Kristanc1, Tanja Blagus1, Maja Trošt2, Vita Dolžan1.
Abstract
Vitamin D is a lipid-soluble molecule and an important transcriptional regulator in many tissues and organs, including the brain. Its role has been demonstrated also in Parkinson's disease (PD) pathogenesis. Vitamin D receptor (VDR) is responsible for the initiation of vitamin D signaling cascade. The aim of this study was to assess the associations of VDR genetic variability with PD risk and different PD-related phenotypes. We genotyped 231 well characterized PD patients and 161 healthy blood donors for six VDR single nucleotide polymorphisms, namely rs739837, rs4516035, rs11568820, rs731236, rs2228570, and rs1544410. We observed that VDR rs2228570 is associated with PD risk (p < 0.001). Additionally, we observed associations of specific VDR genotypes with adverse events of dopaminergic treatment. VDR rs1544410 (GG vs. GA + AA: p = 0.005; GG vs. GA: p = 0.009) was associated with the occurrence of visual hallucinations and VDR rs739837 (TT vs. GG: p = 0.036), rs731236 (TT vs. TC + CC: p = 0.011; TT vs. TC: p = 0.028; TT vs. CC: p = 0.035), and rs1544410 (GG vs. GA: p = 0.014) with the occurrence of orthostatic hypotension. We believe that the reported study may support personalized approach to PD treatment, especially in terms of monitoring vitamin D level and vitamin D supplementation in patients with high risk VDR genotypes.Entities:
Keywords: Parkinson’s disease; adverse events; biomarker; polymorphism; risk; susceptibility; vitamin D; vitamin D receptor
Year: 2022 PMID: 35517045 PMCID: PMC9063754 DOI: 10.3389/fnagi.2022.853277
Source DB: PubMed Journal: Front Aging Neurosci ISSN: 1663-4365 Impact factor: 5.702
Genotype frequencies and characteristics of the genetic variants studied in our PD cohort.
| Gene | Polymorphism | Synonym | Location in gene | MAF (%) | Predicted SNP function | Genotype | HWE equilibrium | ||
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| rs739837 c.*308C>A | 3′UTR | 44.63 | Affects miRNA binding | TT | 66(28.6) | 43(26.7) | 0.819 | |
| TG | 112(48.5) | 79(49.1) | |||||||
| GG | 53(22.9) | 39(24.2) | |||||||
| rs4516035 c.-1413A>G | A-1012G | 5′UTR | 42.25 | Affects transcription factor binding | TT | 63(27.3) | 40(24.8) | 0.169 | |
| CT | 117(50.6) | 89(31.7) | |||||||
| CC | 51(22.1) | 32(19.9) | |||||||
| rs11568820 g.1270G>A | Cdx2 | 5′UTR | 22.76 | Affects transcription factor binding | GG | 159(68.8) | 108(67.1) | 0.133 | |
| GA | 64(27.7) | 51(31.7) | |||||||
| AA | 8(3.5) | 2(1.2) | |||||||
| rs731236 p.Ile352= | Coding region | 39.96 | Affects splicing | TT | 84(36.4) | 60(37.3) | 0.367 | ||
| TC | 113(48.9) | 72(44.7) | |||||||
| CC | 34(14.7) | 29(18.0) | |||||||
| rs2228570 p.Met51Thr | Coding region | 37.77 | Non-synonymous Affects splicing | CC | 88(38.1) | 60(37.3) | 0.117 | ||
| TC | 102(44.2) | 84(52.2) | |||||||
| TT | 41(17.7) | 17(10.6) | |||||||
| rs1544410 | Intron | 40.36 | Alters mRNA stability | GG | 78(33.8) | 58(36.0) | 0.365 | ||
| GA | 119(51.5) | 72(44.7) | |||||||
| AA | 34(14.7) | 30(18.6) |
*SNP function predicted by the tool (
Patient and control cohort characteristics.
| Characteristic | Patient cohort ( | Control cohort ( | |
| Gender | Male (%) | 132 (57.1) | 125 (77.6) |
| Female (%) | 99 (42.9) | 36 (22.4) | |
| Tremor-predominant PD | No (%) | 46 (19.9) | |
| Yes (%) | 185 (81.1) | ||
| Age at enrollment | Median (25–75%), years | 72.5 (65.7–78.0) | 55 (52–58.5) |
| Age at diagnosis | Median (25–75%), years | 62.1 (54.8–71.7) | |
| Disease duration | Median (25–75%), years | 7.6 (3.8–13.6) | |
| LED at enrollment*, | Median (25–75%), mg/day | 975 (600–1,363.5) | |
*LED calculated according to
Associations between VDR genotypes and the risk for Parkinson’s disease.
| Gene | Polymorphism | Genotype | Parkinson’s disease | Parkinson’s disease | ||||
| OR | 95% CI | OR | 95% CI | |||||
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| rs739837 | TT | Ref. | |||||
| TG | 0.92 | 0.57–1.49 | 0.746 | 0.95 | 0.56–1.59 | 0.836 | ||
| GG | 0.89 | 0.50–1.56 | 0.672 | 0.86 | 0.46–1.59 | 0.626 | ||
| TG + GG | 0.91 | 0.58–1.43 | 0.685 | 0.92 | 0.56–1.50 | 0.732 | ||
| rs4516035 | TT | Ref. | ||||||
| CT | 0.84 | 0.52–1.35 | 0.463 | 0.98 | 0.58–1.66 | 0.947 | ||
| CC | 1.01 | 0.56–1.83 | 0.969 | 1.17 | 0.62–2.23 | 0.627 | ||
| CT + CC | 0.88 | 0.56–1.40 | 0.591 | 1.03 | 0.63–1.70 | 0.900 | ||
| rs11568820 | GG | Ref. | ||||||
| GA | 0.85 | 0.55–1.33 | 0.478 | 0.80 | 0.50–1.29 | 0.363 | ||
| AA | 2.72 | 0.57–13.04 | 0.212 | 2.19 | 0.42–11.49 | 0.356 | ||
| GA + AA | 0.92 | 0.60–1.42 | 0.715 | 0.86 | 0.54–1.36 | 0.512 | ||
| rs731236 | TT | Ref. | ||||||
| TC | 1.12 | 0.72–1.75 | 0.614 | 1.16 | 0.72–1.87 | 0.544 | ||
| CC | 0.84 | 0.46–1.52 | 0.560 | 0.97 | 0.51–1.85 | 0.916 | ||
| TC + CC | 1.04 | 0.69–1.58 | 0.855 | 1.11 | 0.71–1.74 | 0.658 | ||
| rs2228570 | CC | Ref. | ||||||
| TC | 0.83 | 0.53–1.28 | 0.397 | 0.92 | 0.58–1.48 | 0.740 | ||
| TT | 1.64 | 0.86–3.16 | 0.136 | 1.63 | 0.81–3.29 | 0.169 | ||
| TC + TT |
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| rs1544410 | GG | Ref. | ||||||
| GA | 1.23 | 0.79–1.92 | 0.368 | 1.25 | 0.77–2.03 | 0.360 | ||
| AA | 0.84 | 0.46–1.53 | 0.574 | 0.94 | 0.49–1.79 | 0.841 | ||
| GA + AA | 1.12 | 0.73–1.70 | 0.612 | 1.16 | 0.74–1.84 | 0.516 | ||
*Adjusted for gender and age. Statistically significant results are printed in bold text.
Significant associations from the univariate analysis adjusted for significant clinical parameters.
| SNP | Adverse event | Adjusted for | Genotype | OR adj. | 95% CI | |
| Visual hallucinations | Age at diagnosis | GG | Ref. | |||
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| AA | 0.51 | 0.20–1.31 | 0.159 | |||
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| Orthostatic hypotension | Age at diagnosis | TT | Ref. | |||
| TG | 1.17 | 0.61–2.23 | 0.645 | |||
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| TG + GG | 1.45 | 0.79–2.65 | 0.232 | |||
| Orthostatic hypotension | Age at diagnosis | TT | Ref. | |||
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| Orthostatic hypotension | Age at diagnosis | GG | Ref. | |||
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| AA | 0.43 | 0.18–1.02 | 0.054 | |||
| GA + AA | 1.01 | 0.99–1.03 | 0.407 | |||
| Peripheral edema |
| TT | Ref. | |||
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| Motor fluctuations | Side of disease initiation Tremor-predominant PD Ever being treated with DAs Age at diagnosis | CC | Ref. | |||
| TC | 1.41 | 0.69–2.92 | 0.348 | |||
| TT | 0.57 | 0.23–1.39 | 0.217 | |||
| TC + TT | 2.12 | 0.94–4.76 | 0.070 |
*OR values from univariate analysis adjusted for clinical parameters from the third column. Statistically significant results are printed in bold text.