| Literature DB >> 35516465 |
Ahmad Seif1,2, Luis R Domingo2, Ehsan Zahedi3, Temer S Ahmadi4, Elham Mazarei2.
Abstract
The kinetic and electron density flows are studied theoretically for the gas phase pyrolysis of cubane via its cage opening to reach bicyclooctatriene and then thermal rearrangement of bicyclooctatriene to produce [8]annulene which is the experimentally observed major product. The observed kinetic data at the MN15-L/maug-cc-pVTZ level of theory were in good agreement with the experimental results as compared to the CBS-QB3 method. The cage opening and the thermal rearrangement steps at the experimentally employed temperature of 520 K were exergonic and exothermic. The atmospheric rate constants calculated by means of the RRKM theory show that the cage opening is the rate-determining step. The temperature dependence of the rate constant for the cage opening step at the MN15-L level can be expressed as log(k/s-1)1bar MN15-L = (15.63) - (48.99 kcal mol-1)/RT ln 10. The molecular mechanism of the reactions has been investigated by means of the bonding evolution theory (BET) at the B3LYP/6-311G (d,p) level of theory. The cage opening course is described topologically by cleaving of C1-C2, C4-C8, and C5-C6 single bonds and electron saturation of the C1-C4, C2-C6, and C5-C8 bonds, while the rearrangement of bicyclooctatriene is described by C3-C7 bond rupture, depopulation of C1-C4 and C5-C8 double bonds, and electron saturation of C1-C5, C3-C4, and C7-C8 bonds. Electron density rearrangement along the two successive steps are asynchronous and the sequence of catastrophes can be represented as: η-1-13-C†C†FFFC†C†FFFC†C†-2-6-[C]2C†[F]2[C†]2C†-0. This journal is © The Royal Society of Chemistry.Entities:
Year: 2020 PMID: 35516465 PMCID: PMC9056628 DOI: 10.1039/d0ra05371f
Source DB: PubMed Journal: RSC Adv ISSN: 2046-2069 Impact factor: 4.036
Scheme 1Details of calculation.
Fig. 1The relative gas-phase enthalpies of the stationary points on the PES for the formation of [8]annulene from the gas phase decomposition of cubane calculated at the MN15-L/maug-cc-pVTZ (blue) and CBS-QB3 (red) level of theories.
Thermodynamic parameters of the reaction including equilibrium constant, K, Gibbs free energy, ΔG0, enthalpy, ΔH0, and entropy, ΔS0, for the gas phase pyrolysis of cubane to [8]annulene calculated at 1 bar and 520 Ka
| Method | Reaction |
| Δ | Δ | Δ |
|---|---|---|---|---|---|
| MN15-L | A → B | 1.06 × 1026 | −259.09 | −225.66 | 64.29 |
| CBS-QB3 | 4.20 × 1030 | −304.87 | −272.83 | 61.66 | |
| MN15-L | B → C | 230 | −23.52 | −23.66 | −0.28 |
| CBS-QB3 | 1520 | −31.67 | −31.67 | −0.24 |
For the ease of notations, cubane, bicyclooctatriene, and [8]annulene are denoted as A, B, and C, respectively.
Fig. 2MN15-L/maug-cc-pVTZ geometries of TS1 (left) and TS2 (right). Imaginary frequencies of saddle points are computed at the MN15-L/maug-cc-pVTZ (blue) and B3LYP/CBSB7 (red), level of theories.
Fig. 3Fall-off curves as a function of pressure for the studied reactions calculated at 520 K.
Wigner tunneling correction (κ), high pressure limit of the rate constant (k∞), unimolecular rate constant at 1 bar (k1bar), low pressure limit of the rate constant (ko), and Lennard-Jones collision frequency (ZLJ) for the gas phase pyrolysis of cubane to [8]annulene calculated at 520 Ka
| Method | Reaction |
|
|
|
|
|
|---|---|---|---|---|---|---|
| MN15-L | A → B | 1.06 | 1.09 × 10−5 | 1.09 × 10−5 | 1.78 × 10−18 | 5.36 × 10−10 |
| CBS-QB3 | 1.18 | 6.56 × 10−10 | 6.56 × 10−10 | 2.94 × 10−21 | ||
| MN15-L | B → C | 1.10 | 6.70 × 104 | 6.31 × 104 | 2.26 × 10−12 | 5.56 × 10−10 |
| CBS-QB3 | 1.10 | 1.84 × 105 | 1.69 × 105 | 3.34 × 10−12 |
For the ease of notations, cubane, bicyclooctatriene, and [8]annulene are denoted as A, B, and C, respectively.
The fitted Arrhenius parameters (A: pre-exponential factor; Ea: activation energy) for the calculated unimolecular rate constant at 1 bar over the temperature range 500–530 K at 5 K intervals. Activation Gibbs free energy, ΔG‡, activation enthalpy, ΔH‡, and activation entropy, ΔS‡, are calculated at 520 Ka
| Method | Reaction | Log |
| Δ | Δ | Δ |
|---|---|---|---|---|---|---|
| MN15-L | A → B | 15.63 | 48.99 | 193.28 | 201.12 | 15.07 |
| CBS-QB3 | 16.09 | 60.14 | 235.77 | 247.32 | 22.22 | |
| MN15-L | B → C | 13.32 | 20.30 | 82.26 | 82.53 | 0.51 |
| CBS-QB3 | 13.13 | 18.82 | 77.91 | 76.79 | −2.14 |
For the ease of notations, cubane, bicyclooctatriene, and [8]annulene are denoted as A, B, and C, respectively.
Fig. 4The IRC profile for the cage opening step calculated at the B3LYP/6-311G(d,p) level of theory with marked turning points and classical representation of the reaction mechanism.
Fig. 5Snapshot of ELF-localization domains (η = 0.80) for cubane, bicyclooctatriene, and turning points associated with the bond breaking in the cage opening step.
Population of the ELF-localization basins associated with the cage opening step calculated at the B3LYP/6-311G(d,p) level
| A | TP1 | TP2 | TP3 | TP4 | TP5 | TP6 | TP7 | TP8 | TP9 | TP10 | TP11 | TP12 | B | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| V(C1,C2) | 1.85 | 1.76 | 1.71 | 1.68 | 1.67 | 1.64 | 1.42 | — | — | — | — | — | — | — |
| V1(C1,C4) | 1.85 | 1.88 | 1.87 | 1.87 | 1.88 | 1.90 | 2.16 | 2.37 | 2.75 | 2.80 | 3.12 | 3.08 | 1.74 | 1.75 |
| V2(C1,C4) | — | — | — | — | — | — | — | — | — | — | — | — | 1.57 | 1.65 |
| V(C1,C5) | 1.85 | 1.95 | 1.98 | 1.99 | 2.00 | 2.00 | 2.02 | 2.03 | 2.04 | 2.09 | 2.15 | 2.21 | 2.29 | 2.22 |
| V(C2,C3) | 1.85 | 1.80 | 1.81 | 1.82 | 1.82 | 1.83 | 1.81 | 1.82 | 1.83 | 1.85 | 1.86 | 1.88 | 1.92 | 1.95 |
| V1(C2,C6) | 1.85 | 1.96 | 2.04 | 2.10 | 2.11 | 2.46 | 2.72 | 2.94 | 3.03 | 3.35 | 3.42 | 1.89 | 1.73 | 1.74 |
| V2(C2,C6) | — | — | — | — | — | — | — | — | — | — | — | 1.63 | 1.71 | 1.70 |
| V(C3,C4) | 1.85 | 1.90 | 1.89 | 1.89 | 1.89 | 1.90 | 2.00 | 2.09 | 2.12 | 2.14 | 2.13 | 2.13 | 2.07 | 2.04 |
| V(C3,C7) | 1.85 | 1.88 | 1.87 | 1.86 | 1.85 | 1.84 | 1.79 | 1.77 | 1.76 | 1.75 | 1.74 | 1.73 | 1.75 | 1.80 |
| V(C4,C8) | 1.85 | — | — | — | — | — | — | — | — | — | — | — | — | — |
| V(C5,C6) | 1.85 | 1.46 | — | — | — | — | — | — | — | — | — | — | — | — |
| V1(C5,C8) | 1.85 | 2.07 | 2.29 | 2.91 | 3.23 | 3.27 | 1.72 | 1.76 | 1.76 | 1.77 | 1.77 | 1.76 | 1.75 | 1.75 |
| V2(C5,C8) | — | — | — | — | — | — | 1.60 | 1.66 | 1.69 | 1.71 | 1.72 | 1.71 | 1.57 | 1.65 |
| V(C6,C7) | 1.85 | 1.83 | 1.89 | 1.93 | 1.93 | 1.96 | 2.01 | 1.96 | 1.96 | 1.95 | 1.94 | 1.93 | 1.93 | 1.95 |
| V(C7,C8) | 1.85 | 1.94 | 1.96 | 1.97 | 1.98 | 1.99 | 1.99 | 1.99 | 1.99 | 2.00 | 2.01 | 2.02 | 2.07 | 2.04 |
| V(C1) | — | — | — | — | — | — | — | 0.61 | 0.52 | 0.39 | — | — | — | — |
| V(C2) | — | — | — | — | — | — | — | 0.59 | 0.52 | — | — | — | — | — |
| V(C4) | — | 1.15 | 1.24 | 1.29 | 1.30 | 1.30 | 0.77 | 0.39 | — | — | — | — | — | — |
| V(C5) | — | — | 0.58 | 0.38 | — | — | — | — | — | — | — | — | — | — |
| V(C6) | — | — | 0.49 | 0.38 | 0.34 | — | — | — | — | — | — | — | — | — |
| V(C8) | — | 0.58 | 0.53 | — | — | — | — | — | — | — | — | — | — | — |
Fig. 6The IRC profile for the thermal rearrangement step calculated at the B3LYP/6-311G(d,p) level of theory with marked turning points and classical representation of the reaction mechanism.
Fig. 7Snapshot of ELF-localization domains (η = 0.80) for [8]annulene and TP2 associated with the C3–C7 bond rupture in the thermal rearrangement step.
Population of the ELF-localization basins associated with the thermal rearrangement step calculated at the B3LYP/6-311G(d,p) level
| B | TP1 | TP2 | TP3 | TP4 | TP5 | C | |
|---|---|---|---|---|---|---|---|
| V1(C1,C4) | 1.75 | 3.30 | 3.18 | 2.75 | 2.30 | 2.20 | 2.16 |
| V2(C1,C4) | 1.65 | — | — | — | — | — | — |
| V1(C1,C5) | 2.22 | 2.31 | 2.43 | 2.84 | 3.25 | 1.89 | 1.86 |
| V2(C1,C5) | — | — | — | — | — | 1.47 | 1.57 |
| V(C2,C3) | 1.95 | 1.97 | 2.00 | 2.06 | 2.10 | 2.12 | 2.16 |
| V1(C2,C6) | 1.74 | 1.74 | 1.74 | 1.76 | 1.77 | 1.81 | 1.86 |
| V2(C2,C6) | 1.70 | 1.72 | 1.73 | 1.73 | 1.72 | 1.65 | 1.57 |
| V1(C3,C4) | 2.04 | 2.14 | 2.28 | 3.10 | 1.81 | 1.84 | 1.86 |
| V2(C3,C4) | — | — | — | — | 1.55 | 1.57 | 1.57 |
| V(C3,C7) | 1.80 | 1.56 | — | — | — | — | — |
| V1(C5,C8) | 1.75 | 3.30 | 3.18 | 2.75 | 2.30 | 2.20 | 2.16 |
| V2(C5,C8) | 1.65 | — | — | — | — | — | — |
| V(C6,C7) | 1.95 | 1.97 | 2.00 | 2.06 | 2.10 | 2.12 | 2.16 |
| V1(C7,C8) | 2.04 | 2.14 | 2.28 | 3.10 | 1.81 | 1.84 | 1.86 |
| V2(C7,C8) | — | — | — | — | 1.55 | 1.57 | 1.57 |
| V(C3) | — | — | 0.66 | — | — | — | — |
| V(C7) | — | — | 0.66 | — | — | — | — |
Scheme 2