| Literature DB >> 35516020 |
Yasir Altaf1, Muhammad Yar2, Muhammad Ali Hashmi3.
Abstract
Density functional theory calculations using the PBE0-D3BJ hybrid functional have been employed to investigate the complexation of main-group metal-cations with [2.2.2]paracyclophane and deltaphane. Geometry optimization under symmetry constraints was performed to observe the mode of coordination that a metal-cation adopts when it resides inside the cyclophane cavity. Thermodynamic properties were investigated to note the trends of stability along a group of metals. To further investigate the bonding properties, Morokuma-Ziegler energy decomposition analysis, natural bond orbital analysis and Bader's analysis were employed. It was observed that most of the main-group metal complexes with cyclophanes prefer an η6η6η6 coordination mode where the metal-cation sits in the centre of the cyclophane cavity. There is an increased thermodynamic stability in [2.2.2]paracyclophane complexes compared to their deltaphane analogues while the reverse is true regarding the strength of coordination based on interaction energy. This journal is © The Royal Society of Chemistry.Entities:
Year: 2020 PMID: 35516020 PMCID: PMC9056411 DOI: 10.1039/d0ra05303a
Source DB: PubMed Journal: RSC Adv ISSN: 2046-2069 Impact factor: 3.361
Fig. 1Cyclophane ligands of interest in the current study.
Key structural features of pCp–M and Dp–M. Exp. shows experimentally reported pCp–Ga+, pCp–In+, pCp–Ge2+, pCp–Sn2+ and pCp–As3+. The computational results for pCp–In+ and pCp–Sn2+ reported earlier given in parentheses. Avg. C–M, Cent–M and CC–M denote average metal–carbon distances, distance of metal cation from the center of the cavity, and average distance between CC of phenyl rings (upper and lower in pCp–M and sideways in Dp–M) from metal ion, respectively
| Avg. C–M | Cent–M | Internal Radius | C | ||
|---|---|---|---|---|---|
|
|
| 2.993 | 0.466 | 2.603 | 2.896 |
|
| 2.972 | 0.000 | 2.625 | 2.895 | |
| Exp.[ | 2.985 | 0.417 | 2.628 | 2.910 | |
|
|
| 3.130 (3.170) | 1.192 (1.698) | 2.644 | 3.052 (3.091) |
|
| 3.029 (3.101) | 0.000 (0.000) | 2.689 (2.765) | 2.963 (3.042) | |
|
|
| 3.144 | 1.351 | 2.640 | 3.066 |
|
| 3.040 | 0.000 | 2.701 | 2.976 | |
|
|
| 2.843 | 0.000 | 2.476 | 2.746 |
| Exp.[ | 3.062 | 0.994 | 2.449 | 3.017 | |
|
|
| 2.952 (2.975) | 0.000 (0.000) | 2.599 (2.595) | 2.872 (2.877) |
| Exp.[ | 2.958 | 0.382 | 2.581 | 2.877 | |
|
|
| 2.957 | 0.000 | 2.605 | 2.879 |
|
|
| 2.851 | 0.266 | 2.498 | 2.742 |
|
| 2.829 | 0.000 | 2.418 | 2.685 | |
| Exp.[ | 3.458 | 2.799 | 2.578 | 3.390 | |
|
|
| 2.866 | 0.000 | 2.498 | 2.769 |
|
|
| 2.900 | 0.000 | 2.537 | 2.810 |
| Dp–Ga+ |
| 2.637 | 2.354 | 2.365 | 2.744 |
|
| 2.836 | 0.000 | 2.467 | ||
| Dp–In+ |
| 2.863 | 2.788 | 2.374 | 2.779 |
|
| 2.877 | 0.000 | 2.512 | ||
| Dp–Tl+ |
| 2.863 | 2.788 | 2.374 | 2.779 |
|
| 2.877 | 0.000 | 2.512 | ||
| Dp–Ge2+ |
| 2.910 | 2.866 | 2.377 | 2.792 |
|
| 2.891 | 0.000 | 2.528 | ||
| Dp–Sn2+ |
| 2.526 | 2.219 | 2.345 | 2.732 |
|
| 2.823 | 0.000 | 2.449 | ||
| Dp–Pb2+ |
| 2.590 | 2.286 | 2.360 | 2.750 |
|
| 2.843 | 0.000 | 2.472 | ||
| Dp–As3+ |
| 2.206 | 2.060 | 2.230 | 2.658 |
|
| 2.724 | 0.000 | 2.343 | ||
| Dp–Sb3+ |
| 2.378 | 2.190 | 2.311 | 2.670 |
|
| 2.784 | 0.000 | 2.400 | ||
| Dp–Bi3+ |
| 2.460 | 2.253 | 2.331 | 2.715 |
|
| 2.803 | 0.000 | 2.421 | ||
Gas-phase enthalpies (kcal mol−1) of formation of metal complexes pCp–M and Dp–M
|
| Dp |
| Dp |
| Dp | |||
|---|---|---|---|---|---|---|---|---|
| Ga+ | −110.1 | −66.7 | Ge2+ | −304.0 | −284.1 | As3+ | −683.7 | −682.8 |
| In+ | −95.7 | −37.8 | Sn2+ | −259.7 | −227.8 | Sb3+ | −566.7 | −559.0 |
| Tl+ | −92.5 | −30.3 | Pb2+ | −243.9 | −207.5 | Bi3+ | −524.8 | −511.7 |
Ionic radii (reported here from literature[40–42]) of metal cations of interest in the current study. All the values are in Å
| Ga+ | 0.81 ( | Ge2+ | 0.73 ( | As3+ | 0.53 ( |
| In+ | 1.04 ( | Sn2+ | 0.93 ( | Sb3+ | 0.76 ( |
| Tl+ | 1.15 ( | Pb2+ | 0.98 ( | Bi3+ | 0.93 ( |
Fig. 2Molecular graphs of C3 symmetric pCp–In+ (representing all the complexes with C3 symmetry) and D3 symmetric pCp–Ge2+ and Dp–As3+ (representing all the D3 symmetric complexes) calculated at PBE0-B3BJ/def2TZVP. BCPs are shown as orange-coloured dots.
Electron density (ρ) and its Laplacian (L), ratio of kinetic energy to electron density (G/ρ) and local energy density (H) calculated through Bader's analysis of the complexes of interest. These QTAIM parameters may be used as criteria to characterize the type of interaction in the current metal–cyclophane complexes based on Table 8.1 from ref. 44 see discussion in the text. The group 13 pCp–M+ and pCp–As3+ are C3 symmetric while all others have D3 symmetric minima. All values in a.u.
|
| Dp | |||||||
|---|---|---|---|---|---|---|---|---|
|
| L |
|
|
| L |
|
| |
| Ga+ | 0.017 | 0.036 | 0.572 | −4.0 × 10−4 | 0.024 | 0.046 | 0.574 | −2.1 × 10−3 |
| In+ | 0.016 | 0.032 | 0.545 | −2.0 × 10−4 | 0.023 | 0.057 | 0.634 | −1.6 × 10−3 |
| Tl+ | 0.018 | 0.042 | 0.618 | 3.0 × 10−4 | 0.027 | 0.073 | 0.716 | −1.0 × 10−3 |
| Ge2+ | 0.025 | 0.046 | 0.532 | −1.7 × 10−3 | 0.029 | 0.050 | 0.540 | −2.9 × 10−3 |
| Sn2+ | 0.023 | 0.046 | 0.565 | −1.4 × 10−3 | 0.029 | 0.058 | 0.598 | −2.8 × 10−3 |
| Pb2+ | 0.024 | 0.059 | 0.651 | −7.0 × 10−4 | 0.030 | 0.074 | 0.681 | −1.9 × 10−3 |
| As3+ | 0.055 | 0.045 | 0.428 | −1.2 × 10−2 | 0.034 | 0.056 | 0.519 | −3.6 × 10−3 |
| Sb3+ | 0.030 | 0.050 | 0.524 | −2.8 × 10−3 | 0.034 | 0.057 | 0.542 | −4.2 × 10−3 |
| Bi3+ | 0.028 | 0.060 | 0.588 | −1.9 × 10−3 | 0.034 | 0.072 | 0.625 | −3.4 × 10−3 |
NBO data for metal-cations in selected cyclophane–metal complexes. NC shows NBO charges of metal-cations, NEC denotes natural electronic configuration while LMCT is for ligand to metal charge transfer
|
| Dp | ||
|---|---|---|---|
| Ga+ | NC | 0.61 | 0.57 |
| NEC | 4s1.984p0.39 | 4s1.984p0.43 | |
| LMCT | 0.39 | 0.43 | |
| In+ | NC | 0.80 | 0.63 |
| NEC | 5s1.995p0.19 | 5s1.975p0.37 | |
| LMCT | 0.20 | 0.37 | |
| Tl+ | NC | 0.78 | 0.64 |
| NEC | 6s1.986p0.24 | 6s1.986p0.36 | |
| LMCT | 0.22 | 0.36 | |
| Ge2+ | NC | 0.96 | 0.97 |
| NEC | 4s1.994p1.03 | 4s1.984p1.02 | |
| LMCT | 1.04 | 1.03 | |
| Sn2+ | NC | 1.16 | 1.37 |
| NEC | 5s1.995p0.85 | 5s1.985p0.58 | |
| LMCT | 0.84 | 0.63 | |
| Pb2+ | NC | 1.26 | 1.40 |
| NEC | 6s1.996p0.73 | 6s1.986p0.55 | |
| LMCT | 0.74 | 0.60 | |
| As3+ | NC | 0.97 | 0.92 |
| NEC | 4s1.994p2.06 | 4s1.984p2.07 | |
| LMCT | 2.03 | 2.08 | |
| Sb3+ | NC | 1.29 | 1.66 |
| NEC | 5s1.995p1.71 | 5s1.985p1.28 | |
| LMCT | 1.71 | 1.34 | |
| Bi3+ | NC | 1.37 | 1.78 |
| NEC | 6s1.996p1.62 | 6s1.986p1.16 | |
| LMCT | 1.63 | 1.22 | |
| Ga | In | Tl | ||||
|---|---|---|---|---|---|---|
| Δ | −3.32 | (−3.09) | 34.55 [10.00] | (−6.80 [4.50]) | 33.72 | (−6.87) |
| Δ | 66.40 | (61.73) | 89.40 [73.20] | (49.24 [39.10]) | 88.67 | (44.47) |
| Δ | −59.47 | (−56.98) | −70.74 [−49.10] | (−49.34 [−31.00]) | −68.25 | (−45.62) |
| 46.1% | (45.8%) | 52.00% [40.80%] | (48.97% [36.90%]) | 52.50% | (50.10%) | |
| Δ | −69.46 | (−67.40) | −65.44 [−71.20] | (−51.42 [−53.10]) | −61.79 | (−45.43) |
| 53.9% | (54.2%) | 48.00% [59.20%] | (51.03% [63.10%]) | 47.5% | (49.9%) | |
| Δ | −62.53 | (−62.66) | −46.78 [−58.50] | (−51.51 [−62.00]) | −41.37 | (−46.57) |
| Ge | Sn | Pb | |
|---|---|---|---|
| Δ | −2.66 | −3.77 [2.1] | −3.96 |
| Δ | 75.88 | 88.57 [86.0] | 96.88 |
| Δ | −88.12 | −93.57–66.5 | −96.56 |
| 26.7% | 32.3% [22.4%] | 34.2% | |
| Δ | −242.16 | −205.31 [−229.9] | −193.83 |
| 73.3% | 68.7% [77.6%] | 66.8% | |
| Δ | −254.41 | −210.30 [−217.10] | −193.50 |
| As | Sb | Bi | ||
|---|---|---|---|---|
| Δ | −10.29 | (−7.20) | −4.80 | −4.91 |
| Δ | 78.98 | (130.07) | 103.33 | 106.87 |
| Δ | −118.37 | (−132.27) | −127.73 | −129.40 |
| 16.7% | (17.2%) | 20.7% | 22.4% | |
| Δ | −589.09 | (−634.78) | −488.72 | −447.91 |
| 83.3% | (82.8%) | 79.3% | 77.6% | |
| Δ | −628.51 | (−636.98) | −512.72 | −470.42 |
| Ga | In | Tl | ||||
|---|---|---|---|---|---|---|
| Δ | −3.76 | (−6.20) | −4.81 | (−11.67) | −4.78 | (−14.01) |
| Δ | 105.14 | (72.51) | 149.89 | (57.30) | 149.34 | (51.92) |
| Δ | −80.18 | (−48.98) | −102.52 | (−39.82) | −99.57 | (−36.36) |
| 48.4% | (39.3%) | 55.4% | (40.3%) | 55.9% | (41.3%) | |
| Δ | −85.48 | (−75.66) | −82.92 | (−58.98) | −78.54 | (−51.59) |
| 51.6% | (60.7%) | 44.6% | (59.7%) | 44.1% | (58.7%) | |
| Δ | −60.52 | (−52.13) | −35.52 | (−41.50) | −28.78 | (−36.03) |
| Ge | Sn | Pb | ||||
|---|---|---|---|---|---|---|
| Δ | −2.10 | (−11.11) | −5.80 | (−9.57) | −8.16 | (−8.98) |
| Δ | 100.36 | (126.50) | 140.15 | (130.24) | 146.76 | (120.82) |
| Δ | −102.48 | (−90.84) | −119.12 | (−94.34) | −121.11 | (−90.38) |
| 27.6% | (24.2%) | 33.4% | (28.6%) | 35.17% | (30.0%) | |
| Δ | −268.68 | (−283.79) | −237.98 | (−235.22) | −223.23 | (−210.59) |
| 72.4% | (75.8%) | 66.6% | (71.4%) | 64.83% | (70.0%) | |
| Δ | −270.81 | (−248.13) | −216.92 | (−199.32) | −197.60 | (−180.15) |
| As | Sb | Bi | ||||
|---|---|---|---|---|---|---|
| Δ | −4.48 | (−41.84) | −5.16 | (−28.21) | −6.11 | (−23.29) |
| Δ | 100.30 | (201.07) | 140.55 | (186.07) | 154.08 | (168.78) |
| Δ | −132.95 | (−142.09) | −147.66 | (−140.83) | −152.61 | (−134.77) |
| 17.4% | (16.2%) | 21.6% | (19.7%) | 23.5% | (21.8%) | |
| Δ | −633.37 | (−734.81) | −535.01 | (−575.48) | −496.03 | (−510.29) |
| 82.6% | (83.8%) | 78.4% | (80.3%) | 76.5% | (78.2%) | |
| Δ | −666.07 | (−675.84) | −542.09 | (−530.24) | −494.61 | (−476.28) |