Literature DB >> 35503477

Monogenic causes of pigmentary mosaicism.

Ken Saida1, Pin Fee Chong2, Asuka Yamaguchi3, Naka Saito4, Hajime Ikehara5, Eriko Koshimizu1, Rie Miyata3, Akira Ishiko6, Kazuyuki Nakamura7, Hidenori Ohnishi8, Kei Fujioka9, Takafumi Sakakibara10, Hideo Asada11, Kohei Ogawa11, Kyoko Kudo12, Eri Ohashi13, Michiko Kawai13, Yuichi Abe13, Naomi Tsuchida1,14, Yuri Uchiyama1,14, Kohei Hamanaka1, Atsushi Fujita1, Takeshi Mizuguchi1, Satoko Miyatake1,15, Noriko Miyake1,16, Mitsuhiro Kato17, Ryutaro Kira2, Naomichi Matsumoto18.   

Abstract

Pigmentary mosaicism of the Ito type, also known as hypomelanosis of Ito, is a neurocutaneous syndrome considered to be predominantly caused by somatic chromosomal mosaicism. However, a few monogenic causes of pigmentary mosaicism have been recently reported. Eleven unrelated individuals with pigmentary mosaicism (mostly hypopigmented skin) were recruited for this study. Skin punch biopsies of the probands and trio-based blood samples (from probands and both biological parents) were collected, and genomic DNA was extracted and analyzed by exome sequencing. In all patients, plausible monogenic causes were detected with somatic and germline variants identified in five and six patients, respectively. Among the somatic variants, four patients had MTOR variant (36%) and another had an RHOA variant. De novo germline variants in USP9X, TFE3, and KCNQ5 were detected in two, one, and one patients, respectively. A maternally inherited PHF6 variant was detected in one patient with hyperpigmented skin. Compound heterozygous GTF3C5 variants were highlighted as strong candidates in the remaining patient. Exome sequencing, using patients' blood and skin samples is highly recommended as the first choice for detecting causative genetic variants of pigmentary mosaicism.
© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

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Year:  2022        PMID: 35503477     DOI: 10.1007/s00439-022-02437-w

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   5.881


  44 in total

1.  Identification of Hypomelanosis of Ito in Pediatric Primary Care.

Authors:  Paula Barbel; Stephanie Brown; Kathleen Peterson
Journal:  J Pediatr Health Care       Date:  2015-02-16       Impact factor: 1.812

2.  Grandparental genotyping enhances exome variant interpretation.

Authors:  Hagit Daum; Hagar Mor-Shaked; Asaf Ta-Shma; Avraham Shaag; Shira Silverstein; Mordechai Shohat; Orly Elpeleg; Vardiella Meiner; Tamar Harel
Journal:  Am J Med Genet A       Date:  2020-02-06       Impact factor: 2.802

3.  Mammalian target of rapamycin pathway mutations cause hemimegalencephaly and focal cortical dysplasia.

Authors:  Alissa M D'Gama; Ying Geng; Javier A Couto; Beth Martin; Evan A Boyle; Christopher M LaCoursiere; Amer Hossain; Nicole E Hatem; Brenda J Barry; David J Kwiatkowski; Harry V Vinters; A James Barkovich; Jay Shendure; Gary W Mathern; Christopher A Walsh; Annapurna Poduri
Journal:  Ann Neurol       Date:  2015-02-26       Impact factor: 10.422

4.  Ubiquitin-specific peptidase 9, X-linked (USP9X) modulates activity of mammalian target of rapamycin (mTOR).

Authors:  Pooja Agrawal; Yu-Ting Chen; Birgit Schilling; Bradford W Gibson; Robert E Hughes
Journal:  J Biol Chem       Date:  2012-04-27       Impact factor: 5.157

5.  mTOR mutations in Smith-Kingsmore syndrome: Four additional patients and a review.

Authors:  G Gordo; J Tenorio; P Arias; F Santos-Simarro; S García-Miñaur; J C Moreno; J Nevado; E Vallespin; L Rodriguez-Laguna; R de Mena; I Dapia; M Palomares-Bralo; Á Del Pozo; K Ibañez; J C Silla; E Barroso; V L Ruiz-Pérez; V Martinez-Glez; P Lapunzina
Journal:  Clin Genet       Date:  2018-02-13       Impact factor: 4.438

6.  Somatic Mutations Activating the mTOR Pathway in Dorsal Telencephalic Progenitors Cause a Continuum of Cortical Dysplasias.

Authors:  Alissa M D'Gama; Mollie B Woodworth; Amer A Hossain; Sara Bizzotto; Nicole E Hatem; Christopher M LaCoursiere; Imad Najm; Zhong Ying; Edward Yang; A James Barkovich; David J Kwiatkowski; Harry V Vinters; Joseph R Madsen; Gary W Mathern; Ingmar Blümcke; Annapurna Poduri; Christopher A Walsh
Journal:  Cell Rep       Date:  2017-12-26       Impact factor: 9.423

7.  Correction to: Clinical spectrum of MTOR-related hypomelanosis of Ito with neurodevelopmental abnormalities.

Authors:  Virginie Carmignac; Cyril Mignot; Emmanuelle Blanchard; Paul Kuentz; Marie-Hélène Aubriot-Lorton; Victoria E R Parker; Arthur Sorlin; Sylvie Fraitag; Jean-Benoît Courcet; Yannis Duffourd; Diana Rodriguez; Rachel G Knox; Satyamaanasa Polubothu; Anne Boland; Robert Olaso; Marc Delepine; Véronique Darmency; Melissa Riachi; Chloé Quelin; Paul Rollier; Louise Goujon; Sarah Grotto; Yline Capri; Marie-Line Jacquemont; Sylvie Odent; Daniel Amram; Martin Chevarin; Catherine Vincent-Delorme; Benoît Catteau; Laurent Guibaud; Alexis Arzimanoglou; Malika Keddar; Catherine Sarret; Patrick Callier; Didier Bessis; David Geneviève; Jean-François Deleuze; Christel Thauvin; Robert K Semple; Christophe Philippe; Jean-Baptiste Rivière; Veronica A Kinsler; Laurence Faivre; Pierre Vabres
Journal:  Genet Med       Date:  2021-08       Impact factor: 8.822

Review 8.  Mouse large-scale phenotyping initiatives: overview of the European Mouse Disease Clinic (EUMODIC) and of the Wellcome Trust Sanger Institute Mouse Genetics Project.

Authors:  Abdel Ayadi; Marie-Christine Birling; Joanna Bottomley; James Bussell; Helmut Fuchs; Martin Fray; Valérie Gailus-Durner; Simon Greenaway; Richard Houghton; Natasha Karp; Sophie Leblanc; Christoph Lengger; Holger Maier; Ann-Marie Mallon; Susan Marschall; David Melvin; Hugh Morgan; Guillaume Pavlovic; Ed Ryder; William C Skarnes; Mohammed Selloum; Ramiro Ramirez-Solis; Tania Sorg; Lydia Teboul; Laurent Vasseur; Alison Walling; Tom Weaver; Sara Wells; Jacqui K White; Allan Bradley; David J Adams; Karen P Steel; Martin Hrabě de Angelis; Steve D Brown; Yann Herault
Journal:  Mamm Genome       Date:  2012-09-09       Impact factor: 2.957

9.  Binding of TFIIIC to sine elements controls the relocation of activity-dependent neuronal genes to transcription factories.

Authors:  Luca Crepaldi; Cristina Policarpi; Alessandro Coatti; William T Sherlock; Bart C Jongbloets; Thomas A Down; Antonella Riccio
Journal:  PLoS Genet       Date:  2013-08-15       Impact factor: 5.917

10.  Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples.

Authors:  Kristian Cibulskis; Michael S Lawrence; Scott L Carter; Andrey Sivachenko; David Jaffe; Carrie Sougnez; Stacey Gabriel; Matthew Meyerson; Eric S Lander; Gad Getz
Journal:  Nat Biotechnol       Date:  2013-02-10       Impact factor: 54.908

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