Literature DB >> 35500229

Spiropyrimidinetrione DNA Gyrase Inhibitors with Potent and Selective Antituberculosis Activity.

Preshendren Govender1, Rudolf Müller1, Kawaljit Singh1, Virsinha Reddy1, Charles J Eyermann1, Stephen Fienberg1, Sandeep R Ghorpade1, Lizbé Koekemoer2, Alissa Myrick2, Dirk Schnappinger3, Curtis Engelhart3, Jaclynn Meshanni3, Jo Ann W Byl4, Neil Osheroff4,5,6, Vinayak Singh1,2, Kelly Chibale1,2, Gregory S Basarab1,7.   

Abstract

New antibiotics with either a novel mode of action or novel mode of inhibition are urgently needed to overcome the threat of drug-resistant tuberculosis (TB). The present study profiles new spiropyrimidinetriones (SPTs), DNA gyrase inhibitors having activity against drug-resistant Mycobacterium tuberculosis (Mtb), the causative agent of TB. While the clinical candidate zoliflodacin has progressed to phase 3 trials for the treatment of gonorrhea, compounds herein demonstrated higher inhibitory potency against Mtb DNA gyrase (e.g., compound 42 with IC50 = 2.0) and lower Mtb minimum inhibitor concentrations (0.49 μM for 42). Notably, 42 and analogues showed selective Mtb activity relative to representative Gram-positive and Gram-negative bacteria. DNA gyrase inhibition was shown to involve stabilization of double-cleaved DNA, while on-target activity was supported by hypersensitivity against a gyrA hypomorph. Finally, a docking model for SPTs with Mtb DNA gyrase was developed, and a structural hypothesis was built for structure-activity relationship expansion.

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Year:  2022        PMID: 35500229      PMCID: PMC9233935          DOI: 10.1021/acs.jmedchem.2c00266

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   8.039


  43 in total

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2.  Glide: a new approach for rapid, accurate docking and scoring. 1. Method and assessment of docking accuracy.

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Journal:  J Med Chem       Date:  2004-03-25       Impact factor: 7.446

3.  Drug interactions with Bacillus anthracis topoisomerase IV: biochemical basis for quinolone action and resistance.

Authors:  Katie J Aldred; Sylvia A McPherson; Pengfei Wang; Robert J Kerns; David E Graves; Charles L Turnbough; Neil Osheroff
Journal:  Biochemistry       Date:  2011-12-16       Impact factor: 3.162

4.  Synthesis of a tetrahydronaphthyridine spiropyrimidinetrione DNA gyrase inhibiting antibacterial agent--differential substitution at all five carbon atoms of pyridine.

Authors:  Gregory S Basarab; Vincent Galullo; Nancy DeGrace; Sheila Hauck; Camil Joubran; Steven S Wesolowski
Journal:  Org Lett       Date:  2014-12-02       Impact factor: 6.005

5.  Protein and ligand preparation: parameters, protocols, and influence on virtual screening enrichments.

Authors:  G Madhavi Sastry; Matvey Adzhigirey; Tyler Day; Ramakrishna Annabhimoju; Woody Sherman
Journal:  J Comput Aided Mol Des       Date:  2013-04-12       Impact factor: 3.686

6.  Identification and Profiling of a Novel Diazaspiro[3.4]octane Chemical Series Active against Multiple Stages of the Human Malaria Parasite Plasmodium falciparum and Optimization Efforts.

Authors:  Claire Le Manach; Jean Dam; John G Woodland; Gurminder Kaur; Lutete P Khonde; Christel Brunschwig; Mathew Njoroge; Kathryn J Wicht; André Horatscheck; Tanya Paquet; Grant A Boyle; Liezl Gibhard; Dale Taylor; Nina Lawrence; Tomas Yeo; Sachel Mok; Richard T Eastman; Dorjbal Dorjsuren; Daniel C Talley; Hui Guo; Anton Simeonov; Janette Reader; Mariëtte van der Watt; Erica Erlank; Nelius Venter; Jacek W Zawada; Ayesha Aswat; Luisa Nardini; Theresa L Coetzer; Sonja B Lauterbach; Belinda C Bezuidenhout; Anjo Theron; Dalu Mancama; Lizette L Koekemoer; Lyn-Marie Birkholtz; Sergio Wittlin; Michael Delves; Sabine Ottilie; Elizabeth A Winzeler; Thomas W von Geldern; Dennis Smith; David A Fidock; Leslie J Street; Gregory S Basarab; James Duffy; Kelly Chibale
Journal:  J Med Chem       Date:  2021-02-12       Impact factor: 7.446

7.  Responding to the challenge of untreatable gonorrhea: ETX0914, a first-in-class agent with a distinct mechanism-of-action against bacterial Type II topoisomerases.

Authors:  Gregory S Basarab; Gunther H Kern; John McNulty; John P Mueller; Kenneth Lawrence; Karthick Vishwanathan; Richard A Alm; Kevin Barvian; Peter Doig; Vincent Galullo; Humphrey Gardner; Madhusudhan Gowravaram; Michael Huband; Amy Kimzey; Marshall Morningstar; Amy Kutschke; Sushmita D Lahiri; Manos Perros; Renu Singh; Virna J A Schuck; Ruben Tommasi; Grant Walkup; Joseph V Newman
Journal:  Sci Rep       Date:  2015-07-14       Impact factor: 4.379

8.  A New-Class Antibacterial-Almost. Lessons in Drug Discovery and Development: A Critical Analysis of More than 50 Years of Effort toward ATPase Inhibitors of DNA Gyrase and Topoisomerase IV.

Authors:  Gregory S Bisacchi; John I Manchester
Journal:  ACS Infect Dis       Date:  2014-12-23       Impact factor: 5.084

9.  Mechanism of Action of Mycobacterium tuberculosis Gyrase Inhibitors: A Novel Class of Gyrase Poisons.

Authors:  Elizabeth G Gibson; Tim R Blower; Monica Cacho; Ben Bax; James M Berger; Neil Osheroff
Journal:  ACS Infect Dis       Date:  2018-05-17       Impact factor: 5.084

10.  Spiropyrimidinetriones: a Class of DNA Gyrase Inhibitors with Activity against Mycobacterium tuberculosis and without Cross-Resistance to Fluoroquinolones.

Authors:  Gregory S Basarab; Sandeep Ghorpade; Liezl Gibhard; Rudolf Mueller; Mathew Njoroge; Nashied Peton; Preshendren Govender; Lisa M Massoudi; Gregory Thomas Robertson; Anne J Lenaerts; Helena Ingrid Boshoff; Douglas Joerss; Tanya Parish; Thomas F Durand-Reville; Manos Perros; Vinayak Singh; Kelly Chibale
Journal:  Antimicrob Agents Chemother       Date:  2022-03-10       Impact factor: 5.938

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  1 in total

1.  On drug discovery against infectious diseases and academic medicinal chemistry contributions.

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