| Literature DB >> 35496782 |
Alicia Lane1, Avanti Gokhale1, Erica Werner1, Anne Roberts2, Amanda Freeman1,3, Blaine Roberts2, Victor Faundez1.
Abstract
This protocol describes how inductively coupled plasma mass spectrometry (ICP-MS) can quantify metals, sulfur, and phosphorus present in biological specimens. The high sensitivity of ICP-MS enables detection of these elements at very low concentrations, and absolute quantification is achieved with standard curves. Sulfur or phosphorus standardization reduces variability that arises because of slight differences in sample composition. This protocol bypasses challenges because of limited sample amounts and facilitates studies examining the biological roles of metals in health and disease. For complete details on the use and execution of this protocol, please refer to Hartwig et al. (2020).Entities:
Keywords: Cell culture; Chemistry; Mass Spectrometry
Mesh:
Substances:
Year: 2022 PMID: 35496782 PMCID: PMC9047006 DOI: 10.1016/j.xpro.2022.101334
Source DB: PubMed Journal: STAR Protoc ISSN: 2666-1667
Figure 1Metal quantification in SH-SY5Y cells and D. melanogaster larvae using ICP-MS
(A–E) Metal content in WT SH-SY5Y cells (colors indicate biological replicates). (A and B) 32S correlation with cell number using a linear model. The 2 replicates with samples for all cell numbers quantified were included in this analysis. (B) Plot of predicted vs. actual of 32S content using a linear model (r2 values = 0.969 and 0.964). Predicted model considers a straight line using as least squares regression fitting with an origin at 0. (C–E) 63Cu, 66Zn, 55Mn, 56Fe, and 56Co versus 32S content. (C and E) Plot of metal content vs. sulfur content. (D) 63Cu normalized to 32S content in five distinct single cell clonal lines of WT SH-SY5Y cells treated with 300 μM copper for 24 h (two tailed Mann-Whitney test p < 0.001).
(F and G) Metal content in WT and ATP7-OE larvae (yellow and pink, respectively). (F) 32S content versus larva number. (G) 63Cu, 66Zn, 55Mn, 56Fe, and 56Co vs. 32S content. Abbreviations: sulfur (32S), copper (63Cu), zinc (66Zn), manganese (55Mn), iron (56Fe), cobalt (56Co). In all graphs, r2 values depicted as a range represent the lowest and highest value in each biological replicate.
Figure 2Comparison of sulfur and phosphorus standardized metal quantification in HAP1 cells using ICP-MS
(A) Metal content in increasing numbers of WT HAP1 cells control (gray symbols) or incubated in the presence of either copper chloride (400 μM, blue symbols) or BCS (400 μM, white symbols) for 24 h. r2 for sulfur correlations = 0.8924, 0.8787, and 0.8619 for control, copper chloride-, and BCS-treated cells. r2 for phosphorus correlations = 0.8610, 0.7429, and 0.8317 for control, copper chloride-, and BCS-treated cells.
(B) 32S and 31P correlation with copper content in control, copper chloride-, and BCS-treated cells. r2 for sulfur correlations = 0.9014, 0.9464, and 0.6233 for control-, copper chloride-, and BCS-treated cells. r2 for phosphorus correlations = 0.9012, 0.9082, and 0.6174 for control, copper chloride-, and BCS-treated cells. In (A and B), best fit correlation and 95% confidence interval are depicted.
(C) 63Cu, 66Zn, 55Mn, 56Fe, and 56Co normalized to 32S and 31P content. Symbols colored as in (A). Two-tailed Anova with Bonferroni multiple corrections reveal p<0.001 for copper measurements using both sulfur and phosphorus normalization. All other metal determinations were not significantly different. (Note: Cells were prepared according to this protocol with the following changes: steps 3–7: Cells were collected in 2 mL PBS-trypsin, neutralized with 1 mL media, and diluted with 7 mL PBS. Step 9: Cells were microcentrifuged at 3,000 g for 2 min).
Nitric acid dilutions used in this study
| Sample type | Number cells or larvae | Volume nitric acid used (μL) |
|---|---|---|
| SH-SY5Y Cells | 250,000 | 20 |
| SH-SY5Y Cells | 500,000 | 20 |
| SH-SY5Y Cells | 1 million | 50 |
| SH-SY5Y Cells | 2 million | 50 |
| SH-SY5Y Cells | 3 million | 50 |
| SH-SY5Y Cells, treated with vehicle or copper ( | Between 1–2 million | 50 |
| HAP1 Cells, treated with vehicle, copper, or BCS ( | Between 0.5–3 million | 50 |
| 1 | 20 | |
| 2 | 40 | |
| 4 | 80 | |
| 8 | 80 | |
| Blank | – | 20 |
Typical operational ICP-MS parameters for Thermo iCAP-TQ-ICP-MS
| Parameter | Value |
|---|---|
| RF power | 1,550 W |
| Sample depth | 5.0 mm |
| Nebulizer flow | 1.12 L∗min−1 |
| Auxiliary Flow | 0.8 L min−1 |
| Spray chamber temperature | 3°C |
| Extraction lens 1, 2 | −195, −215 V |
| Reaction gas | O2, 0.3 mL min−1 |
Thermo iCAP-TQ-ICP-MS acquisition parameters
| Element | Q3 analyte | Internal standard | Dwell time (s) | Q1 resolution |
|---|---|---|---|---|
| 31P.16O | 45Sc.16O | 0.05 | High | |
| 32S.16O | 45Sc.16O | 0.1 | High | |
| 45Sc.16O | – | 0.02 | Normal | |
| 55Mn | 45Sc.16O | 0.05 | Normal | |
| 56Fe.16O | 45Sc.16O | 0.1 | Normal | |
| 59Co | 45Sc.16O | 0.05 | Normal | |
| 63Cu | 45Sc.16O | 0.05 | Normal | |
| 66Zn | 45Sc.16O | 0.05 | Normal | |
| 80Se.16O | 89Y.16O | 0.1 | Normal | |
| 89Y.16O | – | 0.02 | Normal |
Q3 resolution was set to normal for all of the elements. The list can be expanded to include other elements of interest. Each element was measured 4 times.
Coefficient of variation in metal content in SH-SY5Y cells1 normalized to cell number or sulfur content
| Copper | Zinc | Manganese | Iron | Cobalt | |
|---|---|---|---|---|---|
| Normalized to cell number | 42% | 61% | 75% | 61% | 106% |
| Normalized to sulfur | 23% | 41% | 51% | 42% | 81% |
Data in this table correspond to Figure 1.
Average metal content per cell in SH-SY5Y cells1 plus or minus SD
| Sulfur | Copper | Zinc | Manganese | Iron | Cobalt | |
|---|---|---|---|---|---|---|
| Metal content (g) | 8.7E-12 | 4.7E-15 | 1.4E-13 | 2.6E-15 | 4.5E-14 | 4.2E-17 |
| SD (g) | 4.5E-12 | 1.8E-15 | 7.3E-14 | 1.4E-15 | 1.6E-14 | 2.7E-17 |
| Metal content (fg) | 8700 | 4.7 | 140 | 2.6 | 45 | 0.042 |
| SD (fg) | 4500 | 1.8 | 73 | 1.4 | 16 | 0.027 |
Data in this table correspond to Figure 1.
| REAGENT or RESOURCE | SOURCE | IDENTIFIER |
|---|---|---|
| ICP Internal Standard | AccuStandard | Cat#AG-INT2-ASL-5 |
| Multi-element Calibration Standard #2A | AccuStandard | Cat#AG-MECAL2A-ASL-5 |
| Sulfur Standard | Inorganic Ventures | Cat#AAS1 |
| Phosphorus ICP Standard | AccuStandard | #ICP-41W-1, CAS: 7723-14-0 |
| ICP-MS iCAP TQ Tune Solution | Thermo Fisher Scientific | Cat#S55611.AP |
| Trace Elements Serum L-2 | Seronorm | Cat#203113 |
| Trace Elements Serum L-1 | Seronorm | Cat#201413 |
| ∼Ultra-high purity oxygen (99.999%) | Select Gases | Cat#UN1072 |
| ˆ∗∼Copper(II) chloride | Sigma-Aldrich | Cat#203149; CAS: 7447-39-4 |
| ˆ∗∼Bathocuproinedisulfonic acid (BCS) | Sigma-Aldrich | Cat#B1125; CAS: 52698-84-7 |
| ∼Phosphate Buffered Saline (PBS) | Corning | 21-040-CV |
| ∗∼Trypsin Ethylenediaminetetraacetic Acid (EDTA) 0.25% | Corning | 25-053-CI |
| ∗∼Ethylenediaminetetraacetic Acid (EDTA) Disodium Salt Solution | Sigma-Aldrich | E7889-100mL |
| ∗∼DMEM [+] 4.5 g/L glucose, L-glutamine, sodium pyruvate media | Corning | 10-013-CV |
| Human: SH-SY5Y Cells (Passage 20) | ATCC | Cat#CRL-2266; RRID: CVCL_0019 |
| Human: HAP1 Cells (Passage 20) | Horizon Discovery | Cat#C631; RRID: CVCL_Y019 |
| Bloomington Drosophila Stock Center (NIH P40OD018537) | Cat#5905; RRID: BDSC_5905 | |
| Bloomington Drosophila Stock Center (NIH P40OD018537) | Cat#42713; RRID: BDSC_42713 | |
| Richard Burke, Monash University, Australia | N/A | |
| Qtegra | Thermo Fisher Scientific | Cat#IQLAAEGABSFAOVMBCZ |
| ∗∼Biosafety Cabinet | NuAire | NU-425-400, Option A-0 |
| ∗∼CO2 Incubator | Thermo Fisher Scientific | 3110 |
| ∗∼Refrigerated Microcentrifuge | Eppendorf | 5425 R |
| ∗∼Refrigerated Centrifuge | Eppendorf | 5810 R |
| ˆ∗∼ Automated Cell Counter | Bio-Rad | 1450102 |
| ˆ∗∼ Automated Cell Counter slides | Bio-Rad | 1450011 |
| #∼ Drosophila units | SHEL LAB | SRI20P |
| #∼ Drosophila Incubator, IB-15G | Lab Companion | AAH21176U |
| #∼ Drosophila Vials | Genesee Scientific | 32-110 |
| #∼ Dissecting Microscope | Zeiss | Stemi 2000 |
| #∼ Analytical Balance | OHAUS | PA114 |
| #∼ Dumont #2 Laminectomy Forceps | Fine Science Tools | 11223-20 |
| #∼ Petri dishes (35 × 10 mm) | Genesee | 32-103 |
| #ˆ∼ SYLGARD™ 184 Silicone Elastomer Kit | Dow | 2646340 |
| Chemical Fume Hood | N/A | N/A |
| ∼Microcentrifuge | Eppendorf | 5430 |
| ∼Dry Bath Heater | Corning | 6895-FB |
| ∼iCAP TQ ICP-MS | Thermo Fisher Scientific | 731546 |
| ˆ∼2DX prepFAST M5 | Elemental Scientific | 2DXF-73A |
| ∼MASTERBLOCK 96-Well Storage Plate, Polypropylene, 1.2 mL, Chimney Style, Round Bottom, Clear | VWR | 780201 |
| ∼X-Pierce Sealing Films for Robotics & High-Throughput Processing | Southern Labware | XP-100 |
| Milli-Q® ultrapure water | N/A | N/A |
| ˆ∼Adjustable Tip Spacing Multichannel Pipette 125 μL | Integra Biosciences | 4722 |
| ˆ∼125 μL Tips for Adjustable Tip Spacing Multichannel Pipette | Integra Biosciences | 4422 |
| ˆ∼Repeater Pipette | Eppendorf | 4982000322 |
| ˆ∼0.5 mL tips for Repeater Pipette | Eppendorf | 0030089456 |
| ˆ∼5 mL tips for Repeater Pipette | Eppendorf | 0030089421 |
| Microcentrifuge tubes | Sarstedt | 72.607 |
| Microcentrifuge tube screw caps | Sarstedt | 65.716.999 |
| 15 mL tubes | VWR 352097 | N/A |
| Kimwipes | Kimberly-Clark Professional | 34155 |
| Dry ice | N/A | N/A |
Note: Symbols indicate the following: ∼ this item or an equivalent; ∗ only necessary for cell culture experiments; # only necessary for D. melanogaster experiments; ˆ optional but recommended or experiment-specific.
PBS-Trypsin
| Reagent | Final concentration | Volume to 44 mL |
|---|---|---|
| Trypsin EDTA 0.25% | 10:1 v/v (0.02%) | 4 mL |
| PBS | 40 mL |
Store at 4°C. Use within 1 month.
PBS-EDTA
| Reagent | Final concentration | Stock concentration | Volume to 50 mL |
|---|---|---|---|
| EDTA | 10 mM | 0.5 M | 1 mL |
| PBS | 49 mL |
Store at 4°C. Use within 1 month.
Media with copper(II) chloride for SH-SY5Y cells (300 μM)
| Reagent | Final concentration | Stock concentration | Volume to 50 mL |
|---|---|---|---|
| Copper(II) chloride | 300 μM | 30 mM | 500 μL |
| DMEM or media of choice | 49.5 mL |
Store at 4°C. Prepare same day.
Media with copper(II) chloride for HAP1 cells (400 μM)
| Reagent | Final concentration | Stock concentration | Volume to 50 mL |
|---|---|---|---|
| Copper(II) chloride | 400 μM | 30 mM | 667 μL |
| IMDM or media of choice | 49.4 mL |
Store at 4°C. Prepare same day.
Media with BCS for HAP1 cells (400 μM)
| Reagent | Final concentration | Stock concentration | Volume to 50 mL |
|---|---|---|---|
| BCS | 400 μM | 400 mM | 50 μL |
| IMDM or media of choice | 50 mL |
Store at 4°C. Prepare same day.
Standard fly flood
| Reagent | Final concentration | Volume to 1 L | Mass |
|---|---|---|---|
| active dry yeast | 4.8% (w/v) | 48 g | |
| cornmeal | 12% (w/v) | 120 g | |
| agar | 9% (w/v) | 9 g | |
| molasses | 12% (w/v) | 120 g | |
| tegosept | 0.24% (w/v) | 2.4 g | |
| propionic acid | 0.9% (w/v) | 9 mL | |
| Milli-Q water | 900 mL |
Store at 4°C. Use within 3 weeks. (See Hartwig et al. (2020) and Gokhale et al. (2016) for more information).
Nitric acid (2%)
| Reagent | Final concentration | Stock concentration | Volume to 1 L |
|---|---|---|---|
| Nitric acid | 2% | 70% | 28.6 mL |
| Milli-Q water | 971.4 mL |
Store at room temperature. Use within 2 months.
Internal Standard for ICP-MS
| Reagent | Final concentration | Stock concentration | Volume to 2 L |
|---|---|---|---|
| ICP Internal Standard | 10 μg∗L-1 | 100 mg∗L-1 | 200 μL |
| 2% Nitric Acid | 2% | 2% | 2 L (volumetric flask) |
Store at room temperature. Use within 2 months.
Sulfur Calibration Standard for ICP-MS
| Reagent | Final concentration | Stock concentration | Mass to 50 g∗ |
|---|---|---|---|
| Sulfur Standard | 100 mg∗L-1 | 1,000 mg∗L-1 | 5.0 g |
| 2% Nitric Acid | 45.0 g |
Store at room temperature. Use within 2 months. (∗See note at end of this section).
Multielement Calibration Standard for ICP-MS (1,000 ppb/1,000 μg∗L-1)
| Reagent | Final concentration | Stock concentration | Mass to 50 g∗ |
|---|---|---|---|
| Multi-element Calibration Standard #2A | 1,000 μg∗L-1 | 10,000 μg∗L-1 | 5.0 g |
| 2% Nitric Acid | 45.0 g |
Store at room temperature. Use within 2 months. (∗See note at end of this section).
Multielement Calibration Standard for ICP-MS (100 ppb/100 μg∗L-1)
| Reagent | Final concentration | Stock concentration | Mass to 50 g∗ |
|---|---|---|---|
| Multi-element Calibration Standard #2A | 100 μg∗L-1 | 10,000 μg∗L-1 | 0.5 g |
| 2% Nitric Acid | 45.0 g |
Store at room temperature. Use within 2 months. (∗See note at end of this section).