| Literature DB >> 35492268 |
Said Daoui1, Emine Berrin Çınar2, Necmi Dege2, Noureddine Benchat1, Eiad Saif3, Khalid Karrouchi4.
Abstract
In the title compound, C18H15ClN3O+·Cl-·2H2O, three intra-mol-ecular hydrogen bonds are observed, N-H⋯O, O-H⋯Cl and O-H⋯O. In the crystal, mol-ecules are connected by C-H⋯Cl and N-H⋯O hydrogen bonds. Strong C-H⋯Cl, N-H⋯O, O-H⋯Cl and O-H⋯O hydrogen-bonding inter-actions are implied by the Hirshfeld surface analysis, which indicate that H⋯H contacts make the largest contribution to the overall crystal packing at 33.0%. © Daoui et al. 2022.Entities:
Keywords: Hirshfeld surfaces; crystal structure; hydrogen bonding; pyridazine; pyridazinone derivative
Year: 2022 PMID: 35492268 PMCID: PMC8983968 DOI: 10.1107/S2056989022003346
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1Perspective view and atom labelling of the molecule. Displacement ellipsoids are drawn at the 50% probability level.
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C10—H10⋯Cl2i | 0.93 | 2.72 | 3.6387 (19) | 168 |
| C18—H18⋯Cl2ii | 0.93 | 2.94 | 3.622 (2) | 132 |
| N3—H3⋯O2iii | 0.80 (3) | 2.35 (3) | 2.965 (2) | 135 (2) |
| N3—H3⋯O1iii | 0.80 (3) | 2.25 (3) | 2.855 (2) | 133 (3) |
| N2—H2 | 0.86 (2) | 1.97 (2) | 2.801 (2) | 161 (2) |
| O2—H2 | 0.83 (2) | 2.35 (2) | 3.170 (2) | 175 (3) |
| O2—H2 | 0.84 (2) | 1.92 (2) | 2.739 (3) | 167 (3) |
Symmetry codes: (i) ; (ii) ; (iii) .
Figure 2(a)View along the b axis of the unit cell showing the molecular sheets. (b) π–π interactions.
Figure 3Intermolecular interactions with d norm surface.
Figure 4Graphical depictions of the molecular Hirshfeld surfaces; (a) d norm, (b)shape-index, (c) d i, (d) d e,(e) curvedness and (f) fragment-path.
Figure 5Fingerprint plots of the interactions involving the organic cation. (a) All contributions and decomposed into the main contributions: (b) H⋯H, (c) H⋯C/C⋯H, (d) H⋯Cl/Cl⋯H, (e) H⋯O/O⋯H, (f) C⋯C and (g) N⋯H/H⋯N interactions
Figure 6All interactions with percentage contributions.
Experimental details
| Crystal data | |
| Chemical formula | C18H15ClN3O+·Cl−·2H2O |
|
| 396.26 |
| Crystal system, space group | Monoclinic, |
| Temperature (K) | 296 |
|
| 19.6562 (14), 7.5587 (3), 26.4903 (16) |
| β (°) | 109.762 (5) |
|
| 3704.0 (4) |
|
| 8 |
| Radiation type | Mo |
| μ (mm−1) | 0.37 |
| Crystal size (mm) | 0.68 × 0.41 × 0.16 |
| Data collection | |
| Diffractometer | Stoe IPDS 2 |
| Absorption correction | Numerical ( |
|
| 0.818, 0.961 |
| No. of measured, independent and observed [ | 13762, 5273, 3083 |
|
| 0.064 |
| (sin θ/λ)max (Å−1) | 0.702 |
| Refinement | |
|
| 0.050, 0.142, 0.98 |
| No. of reflections | 5273 |
| No. of parameters | 265 |
| No. of restraints | 2 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
| Δρmax, Δρmin (e Å−3) | 0.26, −0.43 |
Computer programs: X-AREA and X-RED32 (Stoe & Cie, 2002 ▸), SHELXT2018/3 (Sheldrick, 2015a ▸), OLEX2 (Dolomanov et al., 2009 ▸) and Mercury (Macrae et al., 2020 ▸), WinGX (Farrugia, 2012 ▸), SHELXL2018/3 (Sheldrick, 2015b ▸), PLATON (Spek, 2020 ▸) and publCIF (Westrip, 2010 ▸).
| C18H15ClN3O+·Cl−·2H2O | |
| Monoclinic, | Mo |
| Cell parameters from 18653 reflections | |
| θ = 1.6–30.3° | |
| µ = 0.37 mm−1 | |
| β = 109.762 (5)° | |
| Prism, colorless | |
| 0.68 × 0.41 × 0.16 mm |
| Stoe IPDS 2 diffractometer | 5273 independent reflections |
| Radiation source: sealed X-ray tube, 12 x 0.4 mm long-fine focus | 3083 reflections with |
| Plane graphite monochromator | |
| Detector resolution: 6.67 pixels mm-1 | θmax = 29.9°, θmin = 1.6° |
| rotation method scans | |
| Absorption correction: numerical (X-RED32; Stoe & Cie, 2002) | |
| 13762 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: mixed | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 5273 reflections | (Δ/σ)max < 0.001 |
| 265 parameters | Δρmax = 0.26 e Å−3 |
| 2 restraints | Δρmin = −0.43 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Cl2 | 0.43892 (4) | 0.44826 (8) | 0.29544 (2) | 0.06204 (18) | |
| Cl1 | 0.16095 (4) | 0.93975 (11) | 0.67565 (3) | 0.0831 (2) | |
| O2 | 0.51631 (9) | 0.7860 (3) | 0.36086 (6) | 0.0569 (4) | |
| O1 | 0.63332 (8) | 0.6580 (2) | 0.47656 (6) | 0.0603 (4) | |
| N2 | 0.52423 (9) | 0.7727 (2) | 0.46837 (7) | 0.0440 (4) | |
| N1 | 0.46811 (9) | 0.8166 (2) | 0.48443 (6) | 0.0437 (4) | |
| O3 | 0.47043 (12) | 1.0366 (3) | 0.28189 (9) | 0.0724 (5) | |
| N3 | 0.83161 (10) | 0.6802 (3) | 0.61940 (8) | 0.0521 (4) | |
| C11 | 0.58620 (10) | 0.6148 (3) | 0.54755 (7) | 0.0414 (4) | |
| C9 | 0.47235 (10) | 0.7645 (3) | 0.53269 (7) | 0.0427 (4) | |
| C12 | 0.58492 (10) | 0.6822 (3) | 0.49587 (7) | 0.0434 (4) | |
| C15 | 0.71539 (10) | 0.5767 (3) | 0.61025 (7) | 0.0420 (4) | |
| C6 | 0.34431 (11) | 0.8182 (3) | 0.61458 (8) | 0.0470 (5) | |
| C10 | 0.53148 (11) | 0.6600 (3) | 0.56490 (7) | 0.0441 (4) | |
| H10 | 0.5323 | 0.6223 | 0.5985 | 0.053* | |
| C8 | 0.41189 (11) | 0.8140 (3) | 0.54971 (8) | 0.0477 (5) | |
| H8 | 0.3747 | 0.8785 | 0.5256 | 0.057* | |
| C7 | 0.40518 (11) | 0.7752 (3) | 0.59642 (8) | 0.0481 (5) | |
| H7 | 0.4434 | 0.7136 | 0.6206 | 0.058* | |
| C14 | 0.76951 (11) | 0.6075 (3) | 0.58944 (8) | 0.0479 (5) | |
| H14 | 0.7626 | 0.5772 | 0.5540 | 0.057* | |
| C13 | 0.64570 (11) | 0.4898 (3) | 0.57732 (8) | 0.0496 (5) | |
| H13A | 0.6554 | 0.4116 | 0.5515 | 0.060* | |
| H13B | 0.6288 | 0.4173 | 0.6009 | 0.060* | |
| C5 | 0.34973 (12) | 0.7804 (3) | 0.66698 (9) | 0.0540 (5) | |
| H5 | 0.3919 | 0.7288 | 0.6898 | 0.065* | |
| C16 | 0.72876 (12) | 0.6223 (3) | 0.66349 (8) | 0.0514 (5) | |
| H16 | 0.6936 | 0.6025 | 0.6792 | 0.062* | |
| C18 | 0.84516 (12) | 0.7257 (3) | 0.67006 (9) | 0.0577 (5) | |
| H18 | 0.8892 | 0.7768 | 0.6897 | 0.069* | |
| C3 | 0.23208 (13) | 0.8927 (3) | 0.65221 (9) | 0.0566 (6) | |
| C2 | 0.22442 (12) | 0.9330 (3) | 0.60014 (9) | 0.0583 (6) | |
| H2 | 0.1820 | 0.9840 | 0.5776 | 0.070* | |
| C1 | 0.28082 (12) | 0.8966 (3) | 0.58179 (9) | 0.0561 (5) | |
| H1 | 0.2762 | 0.9252 | 0.5466 | 0.067* | |
| C17 | 0.79392 (13) | 0.6969 (3) | 0.69313 (9) | 0.0593 (6) | |
| H17 | 0.8029 | 0.7274 | 0.7288 | 0.071* | |
| C4 | 0.29405 (13) | 0.8174 (3) | 0.68616 (9) | 0.0600 (6) | |
| H4 | 0.2986 | 0.7917 | 0.7215 | 0.072* | |
| H3 | 0.8616 (16) | 0.701 (4) | 0.6061 (11) | 0.070 (8)* | |
| H2C | 0.5201 (13) | 0.802 (3) | 0.4362 (10) | 0.053 (6)* | |
| H2A | 0.4937 (17) | 0.700 (3) | 0.3444 (12) | 0.094 (11)* | |
| H2B | 0.5030 (16) | 0.874 (3) | 0.3409 (10) | 0.079 (9)* | |
| H3A | 0.495 (3) | 1.018 (6) | 0.2630 (17) | 0.127 (16)* | |
| H3B | 0.466 (2) | 1.141 (6) | 0.2847 (14) | 0.095 (13)* |
| Cl2 | 0.0694 (4) | 0.0648 (4) | 0.0496 (3) | 0.0006 (3) | 0.0170 (2) | 0.0021 (2) |
| Cl1 | 0.0642 (4) | 0.1042 (6) | 0.0982 (5) | −0.0103 (4) | 0.0502 (4) | −0.0206 (4) |
| O2 | 0.0539 (9) | 0.0660 (12) | 0.0463 (8) | 0.0028 (9) | 0.0111 (7) | 0.0035 (8) |
| O1 | 0.0471 (8) | 0.0848 (12) | 0.0534 (8) | 0.0146 (8) | 0.0229 (7) | 0.0071 (8) |
| N2 | 0.0415 (8) | 0.0494 (10) | 0.0429 (8) | 0.0012 (8) | 0.0168 (7) | 0.0023 (7) |
| N1 | 0.0375 (8) | 0.0469 (10) | 0.0463 (8) | 0.0001 (7) | 0.0138 (7) | 0.0001 (7) |
| O3 | 0.0801 (14) | 0.0676 (14) | 0.0748 (12) | 0.0046 (11) | 0.0331 (10) | 0.0102 (10) |
| N3 | 0.0397 (9) | 0.0596 (12) | 0.0591 (10) | 0.0003 (9) | 0.0195 (8) | 0.0078 (8) |
| C11 | 0.0363 (9) | 0.0416 (10) | 0.0427 (9) | −0.0032 (8) | 0.0089 (7) | −0.0017 (7) |
| C9 | 0.0394 (9) | 0.0448 (11) | 0.0431 (9) | −0.0026 (9) | 0.0128 (7) | −0.0010 (8) |
| C12 | 0.0385 (9) | 0.0455 (11) | 0.0454 (9) | −0.0018 (8) | 0.0130 (8) | −0.0034 (8) |
| C15 | 0.0373 (9) | 0.0417 (11) | 0.0445 (9) | 0.0049 (8) | 0.0107 (7) | 0.0040 (7) |
| C6 | 0.0431 (10) | 0.0513 (12) | 0.0468 (10) | −0.0051 (9) | 0.0153 (8) | −0.0065 (8) |
| C10 | 0.0424 (10) | 0.0486 (12) | 0.0396 (9) | −0.0033 (9) | 0.0116 (8) | 0.0009 (8) |
| C8 | 0.0402 (10) | 0.0529 (12) | 0.0479 (10) | 0.0024 (9) | 0.0123 (8) | −0.0003 (8) |
| C7 | 0.0390 (10) | 0.0570 (13) | 0.0463 (10) | 0.0018 (9) | 0.0119 (8) | −0.0015 (8) |
| C14 | 0.0458 (11) | 0.0560 (12) | 0.0423 (9) | 0.0039 (10) | 0.0154 (8) | 0.0037 (8) |
| C13 | 0.0397 (10) | 0.0481 (12) | 0.0552 (10) | 0.0008 (9) | 0.0085 (9) | 0.0019 (9) |
| C5 | 0.0495 (11) | 0.0632 (14) | 0.0496 (11) | −0.0041 (11) | 0.0171 (9) | −0.0003 (9) |
| C16 | 0.0483 (11) | 0.0615 (13) | 0.0473 (10) | 0.0002 (10) | 0.0200 (9) | 0.0003 (9) |
| C18 | 0.0437 (11) | 0.0615 (14) | 0.0594 (12) | −0.0045 (10) | 0.0062 (9) | 0.0012 (10) |
| C3 | 0.0494 (11) | 0.0620 (14) | 0.0662 (13) | −0.0148 (11) | 0.0297 (10) | −0.0187 (10) |
| C2 | 0.0414 (11) | 0.0720 (16) | 0.0589 (12) | −0.0006 (11) | 0.0133 (9) | −0.0128 (11) |
| C1 | 0.0500 (11) | 0.0731 (15) | 0.0453 (10) | 0.0025 (11) | 0.0163 (9) | −0.0048 (10) |
| C17 | 0.0588 (13) | 0.0703 (16) | 0.0449 (10) | −0.0028 (12) | 0.0125 (10) | −0.0049 (10) |
| C4 | 0.0611 (14) | 0.0736 (16) | 0.0527 (12) | −0.0123 (12) | 0.0290 (11) | −0.0046 (10) |
| Cl1—C3 | 1.748 (2) | C6—C1 | 1.389 (3) |
| O2—H2A | 0.825 (18) | C6—C7 | 1.469 (3) |
| O2—H2B | 0.837 (18) | C10—H10 | 0.9300 |
| O1—C12 | 1.237 (2) | C8—C7 | 1.321 (3) |
| N2—N1 | 1.351 (2) | C8—H8 | 0.9300 |
| N2—C12 | 1.354 (3) | C7—H7 | 0.9300 |
| N2—H2C | 0.86 (2) | C14—H14 | 0.9300 |
| N1—C9 | 1.313 (2) | C13—H13A | 0.9700 |
| O3—H3A | 0.81 (5) | C13—H13B | 0.9700 |
| O3—H3B | 0.80 (4) | C5—C4 | 1.382 (3) |
| N3—C18 | 1.322 (3) | C5—H5 | 0.9300 |
| N3—C14 | 1.329 (3) | C16—C17 | 1.376 (3) |
| N3—H3 | 0.80 (3) | C16—H16 | 0.9300 |
| C11—C10 | 1.349 (3) | C18—C17 | 1.361 (3) |
| C11—C12 | 1.453 (3) | C18—H18 | 0.9300 |
| C11—C13 | 1.503 (3) | C3—C4 | 1.369 (4) |
| C9—C10 | 1.426 (3) | C3—C2 | 1.370 (3) |
| C9—C8 | 1.455 (3) | C2—C1 | 1.380 (3) |
| C15—C14 | 1.373 (3) | C2—H2 | 0.9300 |
| C15—C16 | 1.388 (3) | C1—H1 | 0.9300 |
| C15—C13 | 1.504 (3) | C17—H17 | 0.9300 |
| C6—C5 | 1.386 (3) | C4—H4 | 0.9300 |
| H2A—O2—H2B | 107 (3) | N3—C14—C15 | 120.65 (18) |
| N1—N2—C12 | 128.25 (16) | N3—C14—H14 | 119.7 |
| N1—N2—H2C | 116.0 (16) | C15—C14—H14 | 119.7 |
| C12—N2—H2C | 115.7 (16) | C11—C13—C15 | 115.12 (17) |
| C9—N1—N2 | 116.31 (16) | C11—C13—H13A | 108.5 |
| H3A—O3—H3B | 109 (4) | C15—C13—H13A | 108.5 |
| C18—N3—C14 | 122.87 (19) | C11—C13—H13B | 108.5 |
| C18—N3—H3 | 118 (2) | C15—C13—H13B | 108.5 |
| C14—N3—H3 | 119 (2) | H13A—C13—H13B | 107.5 |
| C10—C11—C12 | 118.06 (18) | C4—C5—C6 | 121.6 (2) |
| C10—C11—C13 | 123.32 (18) | C4—C5—H5 | 119.2 |
| C12—C11—C13 | 118.51 (17) | C6—C5—H5 | 119.2 |
| N1—C9—C10 | 121.28 (17) | C17—C16—C15 | 120.08 (19) |
| N1—C9—C8 | 115.79 (17) | C17—C16—H16 | 120.0 |
| C10—C9—C8 | 122.88 (17) | C15—C16—H16 | 120.0 |
| O1—C12—N2 | 120.86 (17) | N3—C18—C17 | 119.2 (2) |
| O1—C12—C11 | 124.57 (18) | N3—C18—H18 | 120.4 |
| N2—C12—C11 | 114.55 (16) | C17—C18—H18 | 120.4 |
| C14—C15—C16 | 117.37 (19) | C4—C3—C2 | 121.6 (2) |
| C14—C15—C13 | 121.23 (17) | C4—C3—Cl1 | 119.49 (17) |
| C16—C15—C13 | 121.36 (18) | C2—C3—Cl1 | 118.91 (19) |
| C5—C6—C1 | 117.58 (18) | C3—C2—C1 | 118.8 (2) |
| C5—C6—C7 | 119.16 (19) | C3—C2—H2 | 120.6 |
| C1—C6—C7 | 123.26 (18) | C1—C2—H2 | 120.6 |
| C11—C10—C9 | 121.28 (17) | C2—C1—C6 | 121.6 (2) |
| C11—C10—H10 | 119.4 | C2—C1—H1 | 119.2 |
| C9—C10—H10 | 119.4 | C6—C1—H1 | 119.2 |
| C7—C8—C9 | 125.74 (19) | C18—C17—C16 | 119.8 (2) |
| C7—C8—H8 | 117.1 | C18—C17—H17 | 120.1 |
| C9—C8—H8 | 117.1 | C16—C17—H17 | 120.1 |
| C8—C7—C6 | 127.5 (2) | C3—C4—C5 | 118.8 (2) |
| C8—C7—H7 | 116.3 | C3—C4—H4 | 120.6 |
| C6—C7—H7 | 116.3 | C5—C4—H4 | 120.6 |
| C12—N2—N1—C9 | −0.4 (3) | C13—C15—C14—N3 | −178.22 (19) |
| N2—N1—C9—C10 | −3.0 (3) | C10—C11—C13—C15 | −100.2 (2) |
| N2—N1—C9—C8 | 179.47 (17) | C12—C11—C13—C15 | 83.7 (2) |
| N1—N2—C12—O1 | −177.03 (19) | C14—C15—C13—C11 | −92.5 (2) |
| N1—N2—C12—C11 | 4.6 (3) | C16—C15—C13—C11 | 90.2 (2) |
| C10—C11—C12—O1 | 176.3 (2) | C1—C6—C5—C4 | 0.5 (3) |
| C13—C11—C12—O1 | −7.4 (3) | C7—C6—C5—C4 | −179.8 (2) |
| C10—C11—C12—N2 | −5.4 (3) | C14—C15—C16—C17 | 0.6 (3) |
| C13—C11—C12—N2 | 170.88 (18) | C13—C15—C16—C17 | 178.0 (2) |
| C12—C11—C10—C9 | 2.6 (3) | C14—N3—C18—C17 | 0.3 (4) |
| C13—C11—C10—C9 | −173.49 (19) | C4—C3—C2—C1 | 0.0 (4) |
| N1—C9—C10—C11 | 1.8 (3) | Cl1—C3—C2—C1 | 179.66 (18) |
| C8—C9—C10—C11 | 179.15 (19) | C3—C2—C1—C6 | 0.9 (4) |
| N1—C9—C8—C7 | 179.9 (2) | C5—C6—C1—C2 | −1.1 (3) |
| C10—C9—C8—C7 | 2.5 (3) | C7—C6—C1—C2 | 179.2 (2) |
| C9—C8—C7—C6 | −178.2 (2) | N3—C18—C17—C16 | −0.5 (4) |
| C5—C6—C7—C8 | −174.2 (2) | C15—C16—C17—C18 | 0.0 (4) |
| C1—C6—C7—C8 | 5.4 (4) | C2—C3—C4—C5 | −0.5 (4) |
| C18—N3—C14—C15 | 0.3 (3) | Cl1—C3—C4—C5 | 179.77 (19) |
| C16—C15—C14—N3 | −0.8 (3) | C6—C5—C4—C3 | 0.3 (4) |
| H··· | ||||
| C10—H10···Cl2i | 0.93 | 2.72 | 3.6387 (19) | 168 |
| C18—H18···Cl2ii | 0.93 | 2.94 | 3.622 (2) | 132 |
| N3—H3···O2iii | 0.80 (3) | 2.35 (3) | 2.965 (2) | 135 (2) |
| N3—H3···O1iii | 0.80 (3) | 2.25 (3) | 2.855 (2) | 133 (3) |
| N2—H2 | 0.86 (2) | 1.97 (2) | 2.801 (2) | 161 (2) |
| O2—H2 | 0.83 (2) | 2.35 (2) | 3.170 (2) | 175 (3) |
| O2—H2 | 0.84 (2) | 1.92 (2) | 2.739 (3) | 167 (3) |