Letizia Tavagnacco1, Emanuela Zaccarelli1, Ester Chiessi2. 1. CNR-ISC and Department of Physics, Sapienza University of Rome, Piazzale A, Moro 2, Rome 00185, Italy. 2. Department of Chemical Sciences and Technologies, University of Rome Tor Vergata, Via della Ricerca Scientifica I, Rome 00133, Italy.
Abstract
Water is known to play a fundamental role in determining the structure and functionality of macromolecules. The same crucial contribution is also found in the in silico description of polymer aqueous solutions. In this work, we exploit the widely investigated synthetic polymer poly(N-isopropylacrylamide) (PNIPAM) to understand the effect of the adopted water model on its solution behavior and to refine the computational setup. By means of atomistic molecular dynamics simulations, we perform a comparative study of PNIPAM aqueous solution using two advanced water models: TIP4P/2005 and TIP4P/Ice. The conformation and hydration features of an atactic 30-mer at infinite dilution are probed at a range of temperature and pressure suitable to detect the coil-to-globule transition and to map the P-T phase diagram. Although both water models can reproduce the temperature-induced coil-to-globule transition at atmospheric pressure and the polymer hydration enhancement that occurs with increasing pressure, the PNIPAM-TIP4P/Ice solution shows better agreement with experimental findings. This result can be attributed to a stronger interaction of TIP4P/Ice water with both hydrophilic and hydrophobic groups of PNIPAM, as well as to a less favorable contribution of the solvent entropy to the coil-to-globule transition.
Water is known to play a fundamental role in determining the structure and functionality of macromolecules. The same crucial contribution is also found in the in silico description of polymer aqueous solutions. In this work, we exploit the widely investigated synthetic polymer poly(N-isopropylacrylamide) (PNIPAM) to understand the effect of the adopted water model on its solution behavior and to refine the computational setup. By means of atomistic molecular dynamics simulations, we perform a comparative study of PNIPAM aqueous solution using two advanced water models: TIP4P/2005 and TIP4P/Ice. The conformation and hydration features of an atactic 30-mer at infinite dilution are probed at a range of temperature and pressure suitable to detect the coil-to-globule transition and to map the P-T phase diagram. Although both water models can reproduce the temperature-induced coil-to-globule transition at atmospheric pressure and the polymer hydration enhancement that occurs with increasing pressure, the PNIPAM-TIP4P/Ice solution shows better agreement with experimental findings. This result can be attributed to a stronger interaction of TIP4P/Ice water with both hydrophilic and hydrophobic groups of PNIPAM, as well as to a less favorable contribution of the solvent entropy to the coil-to-globule transition.
The
temperature- and pressure-induced coil-to-globule transition
of poly(N-isopropylacrylamide) (PNIPAM) in water
has attracted much interest in the scientific community, initially
because of its possible analogies with folding processes of natural
polypeptides[1,2] and later for its potential as
a mechanism of sophisticated molecular actions, including the mechanical
transduction of thermal pulses[3,4] or the selection of
reactants in stimuli-responsive nanodevices.[5−10] Experimental characterizations focused on mechanistic aspects of
the transition, such as the presence of intermediates and hysteresis,[11−14] highlighting the role of the polymer–water interactions.[15−20] In particular, the abrupt conformational change from an extended,
highly hydrated coil state to a collapsed, partially dehydrated one,
triggered by a temperature increase above the coil-to-globule transition
temperature (TC), inspired the idea of
a cooperative hydration pattern.[12,16,21−29] Consequently, access to the molecular details of the PNIPAM chain
and of its aqueous surrounding as a function of temperature and pressure,
which can be difficult using experimental methods, has gained growing
interest. Atomistic molecular dynamics (MD) simulation owes much of
its fortune to the successful investigation of biopolymers, as recognized
by the Nobel Prize in Chemistry assigned to M. Karplus, M. Levitt,
and A. Warshel in 2013.[30] However, after
the start in the biological world, it soon became clear that this
computational approach could also help characterize the behavior of
synthetic macromolecules,[31,32] including PNIPAM,[33,34] in water. In the last decade, several MD simulation studies have
been published on PNIPAM with different stereochemistries, degrees
of hydration, and slight chemical modifications.[35−62] These contributions mainly focused on the temperature dependence
of the polymer conformation in water and in aqueous mixtures and on
its correlation with surrounding solvent molecules.[35−42,44−46,48,49,51,53−58,60] PNIPAM networks and chain assemblies
with a low degree of hydration were also modeled to disclose molecular
rearrangements occurring at low temperature[50,52,59] or in permeation processes.[61]Some challenges are still open in the atomistic simulation
of PNIPAM,
concerning model effectiveness and sampling efficiency. In this regard,
efforts based on equilibrium MD simulations were coupled with sampling-assisted
methods, such as replica exchange molecular dynamics (REMD), metadynamics,
and potential of mean force calculations.[48,49,53,55] The issue
of equilibrating PNIPAM conformations with all-atom models has been
focused in ref,[54] where a syndiotactic
30-mer has been simulated at 295 K, by 15 independent 1000 ns trajectory
runs, and starting from three different initial configurations. With
the used force-field setup, the globule conformation of PNIPAM is
preferred at this state point, and the authors show that 1 μs
runs, with the equilibration time of the order of 600–700 ns
and the remaining time for the production run, are insufficient to
reproduce strictly consistent distributions of the radius of gyration.
In ref (55), the REMD-enhanced
sampling approach is applied to access the RG temperature dependence of an atactic PNIPAM 40-mer in water.
Moreover, the enthalpy of the coil-to-globule transition is successfully
estimated in water and in water/methanol mixtures by means of reproduction
and analysis of pools of coiled and globular conformations at 300
K from 200 independent simulations of 20 ns for each solution conditions.
This study shows the efficacy of atomistic simulations with assisted
sampling approaches, such as REMD, and the need for a wide number
of short trajectory replicas to quantitatively determine thermodynamic
state functions associated to PNIPAM thermoresponsivity.Irrespective
of the method, the success of the atomistic simulation
relies on a suitable choice of the polymer force field and of the
water model. As shown in Table , a careful literature review detects some heterogeneity in
the used PNIPAM force field, especially in older studies,[35,37−40] and often ad hoc adjustments of partial charges for polymer atoms[42,62] or of van der Waals polymer–water interactions[56] are applied to the original force field, in
order to reproduce the transition between soluble and insoluble states
at the expected temperature.[42,48,49,55,56,62] Recently, the OPLS-AA force field, with
some revisions aimed at increasing PNIPAM–water affinity, has
been the one more frequently adopted.[36,40−46,48−52,54,55,57−63] Interestingly, there is an even greater heterogeneity for the water
model selected to simulate this polymer in aqueous environments, including
SPC,[35] SPC/E,[43,45,48,49,53−55,61] PCFF,[38] TIP3P,[37,39,56] TIP4P,[46] TIP4P/2005,[36,40−42,44,57,58,62] and TIP4P/Ice[50−52,59,60,63] water models. With this background
and with the aim of extending atomistic simulation methods to other
PNIPAM-based systems, it would thus be valuable for the community
to identify the best protocol in terms of both PNIPAM and water parametrization.
Moreover, as summarized in Table , the complex behavior of PNIPAM has been addressed
with several different simulation frameworks aiming at understanding
distinct physical phenomena; thus, a direct comparison between the
available data is not straightforward.
Table 1
Overview
of Atomistic MD Simulation
Studies of PNIPAM since 2011
reference (year)
model system
PNIPAM force field
water force field
thermodynamic region
physical investigation focus
(35)(2011)
oligomer
GROMOS G45A3
SPC
C–G transition
stereoisomerism
(36)(2016)
single chain
OPLS-AAa
TIP4P/2005
C–G transition
tacticity
(37)(2012)
oligomers, single chain
OPLS
TIP3P
C–G transition
degree of polymerization
(38)(2012)
oligomers,
single chain
PCFF
PCFF
C–G transition
solvation
(39)(2010)
single chain
Amber 94a
TIP3P
C–G transition
effect of salt
(40)(2015)
oligomers, single
chain
OPLS-AAa
TIP4P/2005
C–G transition
PNIPAM hydrophobization
(41)(2017)
chains
OPLS-AAa
TIP4P/2005
C–G transition
tacticity
(42)(2016)
oligomer
OPLS-AAa
TIP4P/2005
300 K
pressure-induced aggregation
(43)(2016)
single chain, oligomers
OPLS-AA, Amber 94, PCFF
SPCE, TIP3P, PCFF
C–G transition
liquid–liquid phase equilibrium
(44)(2016)
single
chain
OPLS-AA
TIP4P/2005
C–G transition
structural changes
(45)(2017)
single chain, membrane
OPLS-AA, AMBER
SPCE
C–G transition
structural changes, effect of salt
(46)(2019)
single chain
OPLS-AA
TIP4P
C–G transition
cononsolvency
(47)(2017)
single chain
OPLS-AA
SPCE
C–G transition
solute adsorption
(48)(2018)
chains
OPLS-AA
SPCE
C–G transition
polymer aggregation
(49)(2018)
single chain
OPLS-AA OPLS-AAa
SPCE
C–G transition
thermodynamics, degree of polymerization
(50)(2018)
network
OPLS-AAa
TIP4P/ICE
supercooled
dynamical transition
(51)(2018)
single chain
OPLS-AAa
TIP4P/ICE
C–G transition
molecular mechanism
(52)(2019)
network
OPLS-AAa
TIP4P/ICE
supercooled
dynamical transition
(53)(2019)
single chain
OPLS-AA
SPCE
supercooled, C–G transition
thermodynamics
(54)(2021)
single chain
OPLS-AA
SPCE
295 K
equilibration in solution
(55)(2019)
single chain
OPLS-AA, OPLS-AAa
SPCE
300 K
thermodynamics,
cononsolvency
(56)(2020)
single chain
CHARMMa
TIP3P
C–G transition
N-substitution
(57)(2020)
chains, network
OPLS-AAa
TIP4P/2005
C–G transition
dynamics
(58)(2020)
single chain
OPLS-AAa
TIP4P/2005
C–G transition
cononsolvency
(59)(2021)
chains
OPLS-AAa
TIP4P/ICE
supercooled
dynamical transition
(60)(2021)
single chain
OPLS-AAa
TIP4P/ICE
C–G transition
cononsolvency
(61)(2020)
single chain, chains
OPLS-AAa
SPCE
C–G transition
permeability
(62)(2016)
monomer
OPLS-AAa
TIP4P/2005
C–G transition
thermodynamics
(63)(2021)
single chain
OPLS-AAa
TIP4P/ICE
C–G transition
effect of pressure
Parameters or charges
modified;
C–G transition refers to coil-to-globule transition.
Parameters or charges
modified;
C–G transition refers to coil-to-globule transition.Recent MD simulations provided insights
into the behavior of PNIPAM
systems in aqueous media,[36,40,41,51,57,58,60] extending
the range of temperatures and pressures to unexplored regions.[50,52,59,63] These studies have consistently used the same polymer force field,
namely, the OPLS-AA[64] with the modifications
of Siu et al.,[65] but they either employed
TIP4P/2005[66] or TIP4P/Ice[67] for water, depending on the physical conditions investigated.
Both water models, proposed by the Vega’s group in 2005, are
very effective in reproducing several water properties, each one with
its own peculiarities: on one hand, the TIP4P/2005 model captures
very well the dependence of the isothermal compressibility on pressure
at 298 K as well as the slope of the P–T coexistence line;
on the other hand, the TIP4P/Ice model allows for an excellent prediction
of melting temperature. The aim of the present study is to comparatively
test the performances of these two water models in conjunction with
the modified OPLS-AA force field for PNIPAM[65] and their ability to reproduce the pressure/temperature behavior
of PNIPAM in diluted solution. This comparison, unfeasible from previous
studies due to differences in systems and computing protocols, will
help define an optimal computing setup for MD simulations of PNIPAM-based
systems, as well as of other amphiphilic macromolecules, in aqueous
solution. Furthermore, the differences between the conformational
behavior of the polymer detected using the two water models in a wide
temperature–pressure interval are interpreted on the basis
of the different characteristics of these two solvents. This analysis
will make it possible to highlight the dominant factors in the hydration
pattern, which are needed for a proper molecular description of the
coil-to-globule transition of PNIPAM.
Methods
The pressure–temperature
phase diagram of a PNIPAM linear
chain in diluted aqueous solution is investigated by performing all-atom
MD simulations using two different computational water models, TIP4P/2005[66] and TIP4P/Ice.[67] The
parameters used to define these models are summarized in Table .
Table 2
Potential Parameters of the TIP4P/2005
and TIP4P/Ice Water Modelsa
water model
ϵ (K)
σ (Å)
qH (e)
dOM (Å)
μ (10–18 esu cm)
ρ (g cm–3)
TIP4P/2005
93.2
3.1589
0.5564
0.1546
2.305
0.9979
TIP4P/Ice
106.1
3.1668
0.5897
0.1577
2.426
0.993
ϵ and σ
are the strength
and the size of the Lennard–Jones interaction, respectively; qH is the hydrogen site charge; dOM is the distance between the oxygen and the M site; μ is the dipole moment; and ρ is the
density at 298 K and 0.1 MPa from refs (66) and (67).
ϵ and σ
are the strength
and the size of the Lennard–Jones interaction, respectively; qH is the hydrogen site charge; dOM is the distance between the oxygen and the M site; μ is the dipole moment; and ρ is the
density at 298 K and 0.1 MPa from refs (66) and (67).The polymer
chain consists of 30 repeating units, and it is described
using atactic stereochemistry, in accordance with the experimental
structure.[68,69] PNIPAM is modeled using a revised
version of the OPLS-AA force field,[64] which
incorporates the implementation by Siu et al.[65] In the simulation protocol, first, an energy-optimized chain[36] was centered in a cubic box of 8.5 nm side and
oriented along the box diagonal to maximize the distance between periodic
images. Then, about 22,000 TIP4P/2005 or TIP4P/Ice water molecules
were added, and another energy minimization with a tolerance of 1000
kJ mol–1 nm–1 was carried out.
This system was used as the starting configuration of each independent
simulation. Trajectories were acquired in the NPT ensemble at six
different pressure values, that is, 0.1, 30, 50, 100, 200, and 350
MPa, in a range of temperature between 278 and 308 K. The leapfrog
integration algorithm[70] with a time step
of 2 fs was used. Cubic periodic boundary conditions and minimum image
convention were applied. The length of bonds involving H atoms was
constrained using the LINCS procedure.[71] The velocity rescaling thermostat coupling algorithm with a time
constant of 0.1 ps was used to control temperature.[72] Pressure was maintained using the Berendsen barostat[73] using a time constant of 0.5 ps with a standard
error on pressure values lower than 10%. The cutoff of nonbonded interactions
was set to 1 nm, and electrostatic interactions were calculated using
the smooth particle-mesh Ewald method.[74] Trajectories were acquired for 0.3 μs for each point in the
P–T phase diagram using the GROMACS software package (version
2018),[75,76] and the last 100 ns was considered for analysis,
sampling one frame every 5 ps. Independent simulation replica, also
using different starting conformations of the polymer chain, were
performed at 0.1 MPa and for some critical P–T conditions (Figure S1A–F). Some results of the PNIPAM–TIP4P/Ice
simulations are presented in the previous study.[63]The polymer chain radius of gyration (RG) and the solvent accessible surface area (SASA) were
used to monitor
the occurrence of the coil-to-globule transition. RG was calculated through the equationwhere m is the mass of the ith atom and r is the position of the ith atom with respect to the center of mass of the polymer
chain.
The SASA was calculated as the van der Waals envelope of the solute
molecule extended by the radius of the solvent sphere about each solute
atom center.[77] We used a spherical probe
with a radius of 0.14 nm and the values of van der Waals radii of
the work of Bondi.[78,79] Averages were performed over
the last 100 ns of trajectory. The transition temperature values at
0.1 MPa were calculated as the average of the TC obtained from the sigmoidal fit of the temperature dependence
of RG and SASA. Globular states were assigned
to conformations with an average radius of gyration smaller than 1.2
nm. This cutoff value, already introduced in previous studies,[63] corresponds to the value of RG at the inflection point obtained by fitting using a
sigmoidal function the temperature evolution of the average radius
of gyration at atmospheric pressure (Figure A).
Figure 1
Temperature dependence of (A) PNIPAM radius
of gyration Rg; (B) SASA; and (C) total
number of PNIPAM–PNIPAM
hydrogen bonds, normalized to the number of repeating units, at a
pressure of 0.1 MPa for TIP4P/Ice (green squares) and TIP4P/2005 (violet
triangles). Data represent time-averaged values over the last 100
ns and their standard deviation. Solid lines are a sigmoidal fit to
the data. The transition temperature values, equal to 298.5 ±
1.5 and 288.5 ± 1.0 K for TIP4P/Ice and TIP4P/2005, respectively,
are identified by vertical bands including error bars. Data for TIP4P/Ice
are reproduced from ref (63).
Temperature dependence of (A) PNIPAM radius
of gyration Rg; (B) SASA; and (C) total
number of PNIPAM–PNIPAM
hydrogen bonds, normalized to the number of repeating units, at a
pressure of 0.1 MPa for TIP4P/Ice (green squares) and TIP4P/2005 (violet
triangles). Data represent time-averaged values over the last 100
ns and their standard deviation. Solid lines are a sigmoidal fit to
the data. The transition temperature values, equal to 298.5 ±
1.5 and 288.5 ± 1.0 K for TIP4P/Ice and TIP4P/2005, respectively,
are identified by vertical bands including error bars. Data for TIP4P/Ice
are reproduced from ref (63).To analyze the interactions occurring
between the polymer and water,
hydrogen bonds were evaluated by adopting the geometric criteria of
an acceptor–donor distance lower than 0.35 nm and a hydrogen-donor–acceptor
angle lower than 30°. Polymer hydration was also characterized
by defining water molecules in the first solvation shell as the molecules
having the water oxygen atom at a distance from PNIPAM nitrogen/oxygen
atoms lower than 0.35 nm (hydrophilic water molecules) or a distance
from methyl carbon atoms of PNIPAM lower than 0.55 nm (hydrophobic
water molecules). The fraction of hydration water molecules at the
interface with hydrophobic groups (F) was defined as the number of
water molecules in the first hydration shell of methyl groups divided
by the total number of water molecules in the PNIPAM first hydration
shell. Moreover, hydrogen bonds between water molecules of the first
solvation shell and in the bulk were also analyzed with the same geometric
criteria. Hydrated globular states were defined on the basis of a
cutoff value of 12.5 hydration water molecules per PNIPAM repeating
unit. In analogy with the definition of globular conformations, this
cutoff value corresponds to the number of hydration of water molecules
per PNIPAM residue at the inflection point obtained by fitting using
a sigmoidal function the temperature evolution of the average number
of hydration water molecules at 0.1 MPa.As far as the issue
of equilibrating PNIPAM conformations with
all-atom models is concerned, using the simulation protocol of the
present work, we adopt a compromise between a sustainable computing
cost and a full sampling of conformations. The main motivation of
this study is the comparison between two advanced water models, one
of them being largely used in simulations of polymers and biomacromolecules,
in terms of their ability to reproduce the temperature and pressure
dependence of PNIPAM conformations in aqueous solutions. In this respect,
we assume that a possible systematic error for sampling deficiency
would similarly affect the simulations in TIP4P/ICE and TIP4P/2005,
for the similarity of these models in water molecule representation,
thus preserving the comparative character of this contribution.
Results
and Discussion
To illustrate the comparison between the results
obtained with
the TIP4P/2005 and TIP4P/Ice models, we first analyze the conformational
behavior and solvation of PNIPAM as a function of temperature at atmospheric
pressure. Then, we discuss the temperature-dependent evolution of
the system at higher pressures up to 350 MPa, and finally, we summarize
the temperature–pressure influence on the conformation and
hydration of PNIPAM to draw an approximate phase diagram of the solution.
Coil-to-Globule
Transition at 0.1 MPa
Here, we focus
on the ability of the simulation setup to properly detect, at atmospheric
pressure, the temperature-induced coil-to-globule transition, that
is, the single chain process associated to the phase separation of
PNIPAM aqueous solution occurring at the lower critical solution temperature
(LCST).[11,12] As diagnostic observables, we monitor the
radius of gyration (RG) and the SASA of
the polymer chain, whose behavior in the temperature interval 278–308
K is displayed in Figure A,1B.By increasing temperature,
in both TIP4P/2005 and TIP4P/Ice solutions, we observe a regular evolution
toward conformational states with smaller size and water interface,
which is expected according to the experimental chain behavior.[11,12] This allows us to estimate using a sigmoidal fit the value of the
coil-to-globule transition temperature, equal to 288.5 ± 1.5
and 298.5 ± 1.5 K for the PNIPAM solutions with TIP4P/2005 and
TIP4P/Ice water models, respectively, as confirmed in an independent
simulation replica (see Figure S1A,B).
Considering the experimental TC value,
of about 305 K,[12] the TIP4P/Ice water model
provides a better description. Moreover, a clear difference between
the two models emerges from Figure A,B, which shows the inability of TIP4P/2005 water
simulations to sample very extended conformations of the PNIPAM chain,
even in the temperature range where coiled conformations should be
favored. This finding is further illustrated in Figures S2 and S3, where the time evolution and the distribution
of values of the polymer radius of gyration are reported. The underestimations
of both the TC value and of the chain
size are consistent with each other, demonstrating a lower water affinity
of PNIPAM in TIP4P/2005 solution than in the TIP4P/Ice one. Therefore,
the TIP4P/2005 water appears to be a less “good solvent”
for PNIPAM, with the consequence of a partial reduction of the structural
gap between coil and globule states. Accordingly, the simulations
using this water model cannot detect the variation of the intrachain
hydrogen bonding as a function of temperature, whereas this is observed
in simulations using the TIP4P/Ice water model (Figure C).We now turn our attention to the
properties of hydration water
molecules by analyzing those close to hydrophilic or hydrophobic PNIPAM
groups and by monitoring the formation of hydrogen bonding interactions,
as reported in Figure A–D. The temperature dependence of the number of hydration
water molecules is directly correlated to the conformational transition
of the polymer and follows the same trend as the radius of gyration.
The analysis of the polymer solvation confirms the previous conclusions
on the quality of the solvent. The number of hydration water molecules
found for the TIP4P/2005 model is lower than the one occurring in
the TIP4P/Ice model at all temperatures (Figure A), including the state point at 283 K, which
for both models corresponds to a stable coil state. In addition, the
correlation between RG and the number
of hydration water molecules at 283 K is displayed in Figure S4A, showing that the lower RG values sampled in the TIP4P/2005 water solution correspond
to a lower hydration degree of the polymer.
Figure 2
Temperature dependence
of (A) number of hydration water molecules;
(B) number of PNIPAM–water hydrogen bonds; (C) number of hydrophilic
water molecules; and (D) number of hydrophobic water molecules normalized
to the number of repeating units and averaged over the last 100 ns
of simulation. Data are calculated at 0.1 MPa for TIP4P/Ice (green
circles) and TIP4P/2005 (violet triangles). Data for TIP4P/Ice are
reproduced from ref (63).
Temperature dependence
of (A) number of hydration water molecules;
(B) number of PNIPAM–water hydrogen bonds; (C) number of hydrophilic
water molecules; and (D) number of hydrophobic water molecules normalized
to the number of repeating units and averaged over the last 100 ns
of simulation. Data are calculated at 0.1 MPa for TIP4P/Ice (green
circles) and TIP4P/2005 (violet triangles). Data for TIP4P/Ice are
reproduced from ref (63).Considering the parametrization
of the two water models and the
more polar character of the TIP4P/Ice molecule (Table ), the higher solubility of the polymer,
detected using this model, could be attributed to a stronger interaction
with polar groups of PNIPAM. Indeed, the water–polymer hydrogen
bonding is generally higher for TIP4P/Ice than for the TIP4P/2005
model (Figure B),
as well as the number of water molecules in the vicinity of amide
groups (Figure C).
However, the hydration of hydrophobic regions of PNIPAM is also larger
in the TIP4P/Ice solution, especially at the intermediate temperatures
(Figure D). The higher
affinity of this water model toward apolar groups is demonstrated
by the hydration free energy of methane calculated in TIP4P/Ice, which
is in excellent agreement with the experimental value and found to
be lower than the corresponding hydration free energy obtained in
TIP4P/2005 water.[80] Therefore, TIP4P/Ice
water is found to be a better solvent for both polar and apolar PNIPAM
components. Hydrophobic hydration has been proposed as having a direct[29] role and an indirect[81] role in the solution behavior of PNIPAM. The study of Ono and Shikata
hypothesized the formation of water-water hydrogen bond bridges between
adjacent isopropylamide groups, directly sustaining extended polymer
conformations below the LCST.[29] According
to Bischofberger et al.,[81] the solubility
of PNIPAM in an aqueous environment is influenced by the hydration/dehydration
of hydrophobic moieties because of the different chemical potential
of water in the polymer hydration shell and in the bulk of the solution.
In light of these experimental suggestions, we analyzed the weight
of the hydrophobic component in the polymer hydration, looking for
differences between TIP4P/Ice and TIP4P/2005 simulations.Figure A,B shows
the distribution of the values of the fraction of hydration water
molecules at the interface with hydrophobic groups (F) at atmospheric
pressure and compares them to those at 200 MPa (Figure C,D), at both 283 and 308 K, where coil and
globular states are stable, respectively. F values are greater than
0.8, indicating that hydration of hydrophobic groups is the major
component for PNIPAM. As a common feature of the two water models,
the distributions are larger for the globular states than for the
coil states, which is attributable to the higher thermal agitation.
However, the distribution maxima do not depend on temperature and
thus on chain conformation. This finding indicates that although in
the globular state, the aggregation of hydrophobic moieties occurs
with a consequent decrease of the total hydrophobic interface area
with respect to the coil state, a similar relative decrease involves
the hydrophilic interface area. The distributions obtained at 0.1
MPa in the TIP4P/Ice solution (Figure A,B) are slightly shifted to larger abscissa values,
that is, the weight of the hydrophobic hydration is higher for this
model than for TIP4P/2005. Significantly, this hydration mode characterizes
the water model with the better performance in reproducing PNIPAM
coil-to-globule transition at atmospheric pressure. Furthermore, we
comparatively analyzed the connectivity between water molecules composing
the first hydration shell of PNIPAM and in the bulk of the solution
at 283 and 308 K. The number of hydrogen bonds per water molecule
in these two domains is reported in Table , for both TIP4P/Ice and TIP4P/2005 simulations.
Irrespective of the domain and at the same conditions, the TIP4P/Ice
water molecules form more hydrogen bonds than TIP4P/2005 water molecules.
Considering the state at 283 K, the higher hydrogen bonding connectivity
of TIP4P/Ice water molecules in the PNIPAM hydration shell contributes
to the stabilization of extended conformations, as proposed in ref (29). Therefore, the increased
solubility of PNIPAM in TIP4P/Ice water is supported by both increased
dipolar and hydrogen bonding interactions between the polymer and
water and by a more connected and hydrophobic interfaced water shell.
Figure 3
Distribution
of values of the fraction of hydrophobic water molecules
(F) calculated over the last 100 ns of the simulation data at a pressure
of 0.1 MPa and temperature values of (A) 283 and (B) 308 K and at
a pressure of 200 MPa and temperature values of (C) 283 and (D) 308
K for TIP4P/Ice (green) and TIP4P/2005 (violet), respectively.
Table 3
Hydrogen Bonding of PNIPAM Hydration
and Bulk Water at 0.1 MPaa
bulk
water
hydration
water
T (K)
TIP4P/Ice
TIP4P/2005
TIP4P/Ice
TIP4P/2005
283
1.813 (±0.003)
1.773 (±0.002)
1.322 (±0.005)
1.279 (±0.009)
308
1.777 (±0.001)
1.726 (±0.002)
1.275 (±0.003)
1.221 (±0.010)
Average number of water–water
hydrogen bonds per water molecule, with standard deviation.
Distribution
of values of the fraction of hydrophobic water molecules
(F) calculated over the last 100 ns of the simulation data at a pressure
of 0.1 MPa and temperature values of (A) 283 and (B) 308 K and at
a pressure of 200 MPa and temperature values of (C) 283 and (D) 308
K for TIP4P/Ice (green) and TIP4P/2005 (violet), respectively.Average number of water–water
hydrogen bonds per water molecule, with standard deviation.On the basis of the features of
PNIPAM solvation in the two water
models, we now hypothesize an explanation for the large difference
of the TC value detected in TIP4P/Ice
and TIP4P/2005 solutions. Figure A clearly shows the occurrence of an abrupt dehydration
of PNIPAM in both solutions when temperature is increased, concerted
to the coil-to-globule transition (Figure ). However, in TIP4P/2005 water, this process
is anticipated by about 10 K. Although in absolute values, the hydration
degree of PNIPAM is greater in TIP4P/Ice than in TIP4P/2005 solution,
the variations of the hydration shell and of the PNIPAM–water
hydrogen bonding at the transition are similar in the two systems
(Figure ). In particular,
at TC, the same number of water molecules
is released from the hydration shell to the bulk, experiencing a change
in hydrogen bonding. In addition, according to the results reported
in Table , TIP4P/Ice
and TIP4P/2005 water molecules undergo the same increase of hydrogen
bonding, equal to 0.5 hydrogen bonds per water molecule, moving from
the polymer shell to the bulk region. Overall, these characteristics
suggest that the coil-to-globule transition enthalpy (ΔHc–g), which is positive and mainly determined
by changes in polymer–water and water–water interactions,
has a similar value in the two solutions. Therefore, the lower TC value for PNIPAM in TIP4P/2005 water should
be ascribed to a higher transition entropy (ΔSc–g), being TC = ΔHc–g/ΔSc–g. The main physical factor determining a positive ΔSc–g value in this kind of conformational
transition of amphiphilic macromolecules is the decrease of the excluded
volume to water, which leads to a concomitant increase of the translational
entropy of solvent molecules.[82] However,
this gain of translational entropy is related to the solvent density
and increases at higher density since a larger number of water molecules
acquires translational degrees of freedom.[83] By comparing the water density values of TIP4P/Ice and TIP4P/2005
at room temperature (Table ), we note that the latter model has a higher density, leading
to the conclusion that a higher coil-to-globule transition entropy
results in the lower value of TC for PNIPAM
in the TIP4P/2005 solution.
Solution Behavior above Atmospheric Pressure
In our
simulations, we scanned the phase diagram of PNIPAM aqueous solution
by changing the temperature under different isobaric conditions from
0.1 to 350 MPa, within a temperature interval suitable to cross the
transition temperature. In this pressure range, the experimental P–T
phase diagram of PNIPAM aqueous solution is characterized by a nonmonotonic
phase separation curve, where the transition temperature increases
for pressures from 0.1 to about 50–100 MPa and then decreases
at higher pressure.[84−87] Above about 200 MPa, phase separation takes place at lower temperatures
as compared to atmospheric pressure. However, a Fourier transform
infrared (FTIR) spectroscopy investigation[88] detected a general enhancement of amide group hydration in the high-pressure
regime. Moreover, a peculiar rehydration of PNIPAM microgels in the
collapsed state has been observed at pressures of 100 MPa and over,
using small-angle X-ray scattering and FTIR measurements.[89,90] Therefore, although both temperature and pressure can induce the
PNIPAM transition to a collapsed state in linear and crosslinked systems,[91,92] these variables act antagonistically, and pressure can only partially
compensate for the thermally induced transition.[89]The temperature behavior of RG at different pressures is shown in Figure A–H, comparing the results of TIP4P/Ice
and TIP4P/2005 solutions. For the discussion of these findings, we
apply the operative criterion of considering RG = 1.2 nm as the threshold to discriminate between coil and
globule states. In the PNIPAM–TIP4P/Ice system, RG shows a uniform decreasing trend with temperature at
all pressures, allowing us to distinguish the temperature stability
ranges of coil and globular states. Figure A–D highlights the initial increase
and subsequent decrease of the temperature where the threshold RG value is crossed, changing the pressure from
0.1 to 350 MPa, similarly to the experimental phase behavior. Differently,
the isobaric behavior of RG at 50, 200,
and 350 MPa as a function of temperature for the PNIPAM–TIP4P/2005
system (Figure F–H)
is more irregular, with oscillations between coil and globule states
with increasing temperature. In general, globular conformations are
sampled at lower temperatures, as compared to the corresponding isobaric
temperature scans in TIP4P/Ice water. At 350 MPa, the chain mainly
populates globular states except at 283 K, and extremely small RG values are observed at higher temperatures
(Figure H).
Figure 4
Temperature
dependence of PNIPAM radius of gyration at pressure
values of (A,E) 0.1, (B,F) 50, (C,G) 200, and (D,H) 350 MPa for TIP4P/Ice
(circles) and TIP4P/2005 (triangles). Data represent time-averaged
values over the last 100 ns and standard deviation. Solid lines are
the sigmoidal fit to the data. The dashed horizontal lines mark the
critical value used to define collapsed conformations. Some data for
TIP4P/Ice are reproduced from ref (63).
Temperature
dependence of PNIPAM radius of gyration at pressure
values of (A,E) 0.1, (B,F) 50, (C,G) 200, and (D,H) 350 MPa for TIP4P/Ice
(circles) and TIP4P/2005 (triangles). Data represent time-averaged
values over the last 100 ns and standard deviation. Solid lines are
the sigmoidal fit to the data. The dashed horizontal lines mark the
critical value used to define collapsed conformations. Some data for
TIP4P/Ice are reproduced from ref (63).We next consider the
hydration features of coil and globule states
in the high-pressure regime that can be used to monitor the conformational
changes of the polymer system. The correlation between RG and the number of hydration water molecules for PNIPAM
in TIP4P/Ice and TIP4P/2005 solutions at 200 MPa and 283 K, a condition
for which coiled states are sampled using both water models, is illustrated
in Figure S4B. A higher hydration degree
of the polymer chain, as compared to that at 0.1 MPa, can be observed
at 200 MPa at this temperature in the two systems, in agreement with
experimental findings.[89] As a further characteristic
of the solvation, we analyzed the fraction of hydrophobic hydration
water, whose distribution of values at 200 MPa is shown in Figure C,D at 283 and 308
K, respectively. Unlike what detected at 0.1 MPa (Figure A,B), no difference between
the two water models emerges for this property. However, the comparison
with the findings of Figure A,B highlights a change of the PNIPAM hydration pattern in
TIP4P/Ice water moving from 0.1 to 200 MPa, with a higher contribution
of hydration of hydrophilic groups at the higher pressure, as proposed
in ref (88). A similar
change is not observed for the TIP4P/2005 solution.The temperature
behavior of the number of hydration water molecules
at 50, 200, and 350 MPa is reported in Figure S5A–D of the Supporting Information. At 50 MPa, the hydration
degree of the polymer chain is quite similar to that observed at atmospheric
pressure and higher in TIP4P/Ice water. At higher pressures, PNIPAM
is surrounded by a larger number of hydration water molecules, as
compared to that at atmospheric pressure, in both polymer solutions
at all temperatures, as already pointed out for the condition at 200
MPa and 283 K. However, the water affinity of PNIPAM remains higher
in the TIP4P/Ice solution also at high pressures, with the number
of solvent molecules of the polymer hydration shell being in general
greater in TIP4P/Ice than in TIP4P/2005 (Figure S5C,D). We now focus on the polymer hydration at 350 MPa and
303 K: in the P–T phase diagram, this condition identifies
a phase-separated state,[86] corresponding
for the single chain to a globule state. Accordingly, globular conformations
are sampled by the simulation using both water models (Figure D–H). However, experimental
studies document an enhancement of polymer hydration at high pressure
above the transition temperature,[89] also
detected using the TIP4P/Ice water model.[63] By considering the results of Figure S5D, the TIP4P/2005 water model seems to be unable to fully reproduce
this feature since the number of hydration water molecules has a very
low value at 350 MPa and 303 K, and it further decreases at 308 K.To highlight the influence of pressure on the conformation and
hydration of PNIPAM, we show in Figure A,B the behavior of RG,
SASA, and the number of hydration water molecules as a function of
pressure for two isotherms: the first one is chosen at 283 K, which
in the experimental phase diagram corresponds to a region of stability
of the one-phase solution up to extremely high pressures, while the
second temperature is 303 K, close to the LCST and to the coil-to-globule
transition temperature.[11,12] In our simulations,
the TC value at 0.1 MPa is higher than
283 K for both solution models (Figure A), and at this temperature, coil states are preferred
at all investigated pressures, consistent with the experimental behavior.
At 303 K and 0.1 MPa, PNIPAM is in the globule state, again both in
TIP4P/Ice and in TIP4P/2005 water. However, at 303 K, the evolution
of the system with increasing pressure is different for the two solution
models. In TIP4P/Ice water, we detect a significant increase of chain
size and hydration up to 100 MPa with a subsequent decrease at higher
pressures, which qualitatively agrees with the re-entrant behavior
occurring for an isothermal increase of pressure at a temperature
slightly above the transition temperature at 0.1 MPa.[93] On the other hand, in the TIP4P/2005 solution at 303 K,
the observables monitored in Figure B display a more attenuated dependence on pressure,
with the globule state always remaining the preferred conformation.
The discrepancies between the conformational features and hydration
of PNIPAM in TIP4P/Ice and TIP4P/2005 water as a function of pressure
at 303 K are illustrated in Figure A–F. In the TIP4P/2005 solution, the redissolution
of the polymer chain at intermediate pressure and the formation of
a largely hydrated collapsed state at high pressure are not detected
within our simulations. In general, it appears that in TIP4P/2005
water, the pressure increase has a more limited effect on the conformation
and hydration of PNIPAM globular states, as compared to what is observed
in TIP4P/Ice water (Figure A,B).
Figure 5
Pressure dependence of the average radius of gyration
(circles);
the total number of hydration water molecules normalized to the number
of repeating units (squares); and the SASA (triangles) calculated
for (A) TIP4P/2005 and (B) TIP4P/Ice at T = 283 (blue)
and 303 (green) K. The dashed horizontal lines mark the critical value
used to define collapsed conformations.
Figure 6
Comparative
snapshots of a PNIPAM chain simulated at 303 K in TIP4P/Ice
at pressure values of (A) 0.1, (B) 50, and (C) 350 MPa and in TIP4P/2005
at pressure values of (D) 0.1, (E) 50, and (F) 350 MPa. PNIPAM backbone
carbon atoms are shown in yellow/green for the TIP4PICE/TIP4P2005
water models, respectively. Hydrogen, carbon, oxygen, and nitrogen
atoms are shown in gray, light blue, red, and blue, respectively.
Hydration water molecules are displayed in blue.
Pressure dependence of the average radius of gyration
(circles);
the total number of hydration water molecules normalized to the number
of repeating units (squares); and the SASA (triangles) calculated
for (A) TIP4P/2005 and (B) TIP4P/Ice at T = 283 (blue)
and 303 (green) K. The dashed horizontal lines mark the critical value
used to define collapsed conformations.Comparative
snapshots of a PNIPAM chain simulated at 303 K in TIP4P/Ice
at pressure values of (A) 0.1, (B) 50, and (C) 350 MPa and in TIP4P/2005
at pressure values of (D) 0.1, (E) 50, and (F) 350 MPa. PNIPAM backbone
carbon atoms are shown in yellow/green for the TIP4PICE/TIP4P2005
water models, respectively. Hydrogen, carbon, oxygen, and nitrogen
atoms are shown in gray, light blue, red, and blue, respectively.
Hydration water molecules are displayed in blue.To explain this difference, we examined the pressure dependence
of the solvent density, which is found to be similar for both water
models in the investigated temperature interval.[94,95] Hence, the reason for the discrepancy should be ascribed to a different
interaction with the polymer. A simulation study of the melting of
methane hydrate has highlighted a lower stability of the TIP4P/2005
water interaction with methane, as compared to that of TIP4P/Ice,
even above atmospheric pressure.[96] Therefore,
a weaker interaction of water with the apolar groups of PNIPAM, which
consequently results in the stabilization of intrachain hydrophobic
contacts, could be responsible for the attenuated hydration and conformation
response to pressure occurring in the TIP4P/2005 solution. It is noteworthy
that the destabilization of the interactions between hydrophobic groups
and their rehydration is considered to be a factor in the pressure-induced
denaturation of proteins,[97,98] a process analogous
to the pressure-induced globule-to-coil transition of PNIPAM.Overall, these findings suggest that using the TIP4P/2005 water
model, some features of the influence of temperature and pressure
on PNIPAM aqueous solution can be qualitatively reproduced: (i) the
thermally induced coil-to-globule transition at constant pressure
and (ii) the effect of pressure on the polymer hydration, especially
at low temperatures. However, the balance between temperature and
pressure effects is not adequately captured, leading to discrepancies
of the phase boundaries as compared to what is obtained using the
TIP4P/Ice model.[63] An approximate P–T
phase diagram for the PNIPAM–TIP4P/2005 solution is drawn in Figure A, including the
results of additional simulations at 30 and 100 MPa (discussed in Table S1). State points are associated to coil
and globule conformations on the basis of the average radius of gyration
of the polymer chain, using a cutoff value of 1.2 nm, as defined in
the Methods section. To directly compare the
simulations results with the experimental observation of rehydration
of PNIPAM microgels in the collapsed state at high pressure,[89,90] a further distinction between globular and hydrated globular states
is obtained using the criterion based on the number of hydration water
molecules, being higher than 12.5 for the latter (see the Methods section). Phase boundaries are estimated
on the overall trend of the defined state points and represent a guide
to the eye due to the finite number of examined conditions. In the
resulting phase diagrams reported in Figure A,B, we note that using the TIP4P/2005 water
model, the hydrated globule state is not detected for any of the explored
pressure/temperature parameters, in qualitative disagreement with
experiments. To test the arbitrariness of the chosen cutoff values,
we have additionally explored the changes observed in the phase diagram
when using a different cutoff value of RG = 1.1 nm to define globular states. Notwithstanding the use of a
different cutoff value, the overall position and shape of the phase
separation curve between coil and globule states in Figure A do not appreciably change,
supporting the validity of the adopted criteria.
Figure 7
PNIPAM phase diagram
in (A) TIP4P/2005 and (B) TIP4P/Ice water.
State points where coil and globule conformations are populated are
shown with asterisks and circles, respectively. The threshold of RG = 1.2 nm was used to distinguish coil and
globule states. Hydrated globules are characterized by a number of
hydration water molecules/residues equal to or greater than 12.5.
Colored areas and phase boundaries are guides to the eye. Some data
for TIP4P/Ice are reproduced from ref (63).
PNIPAM phase diagram
in (A) TIP4P/2005 and (B) TIP4P/Ice water.
State points where coil and globule conformations are populated are
shown with asterisks and circles, respectively. The threshold of RG = 1.2 nm was used to distinguish coil and
globule states. Hydrated globules are characterized by a number of
hydration water molecules/residues equal to or greater than 12.5.
Colored areas and phase boundaries are guides to the eye. Some data
for TIP4P/Ice are reproduced from ref (63).
Conclusions
The
single-chain behavior of PNIPAM in water is dictated by a delicate
balance between conformational constraints and polymer–water
and water–water interactions. To these factors, the topology
of the PNIPAM–solvent interface and its variations with the
polymer conformation add an entropic contribution related to the translational
motion of water molecules. In this work, we focused on the comparison
between two advanced water models, TIP4P/2005 and TIP4P/Ice, in reproducing
the main features of the PNIPAM coil-to-globule transition within
the same computational setup conditions and the same force field for
the polymer. Our results altogether show that the characteristics
of the TIP4P/2005 water model lead to an underestimation of the PNIPAM
water affinity, as compared to the TIP4P/Ice water model, thereby
reducing the thermodynamic stability domain of the coil state. In
particular, at atmospheric pressure, the transition to a globular
state is anticipated at a lower temperature, by roughly 10 K, and
the phase boundary in the P–T diagram has an approximately
flat behavior, lacking the details of the TC dependence on pressure. We thus postulate that the weaker interaction
of TIP4P/2005 water with polymer nonpolar groups, as compared to the
TIP4P/Ice model, contributes to the lower sensitivity to pressure
of PNIPAM globular conformations. The better agreement with experimental
results obtained for TIP4P/Ice water at 0.1 MPa can be explained with
a lower coil-to-globule transition entropy due to the lower density
of this water model. Based on this hypothesis, it is possible that
the efficiency of the TIP4P/2005 water model in describing the PNIPAM
solution behavior could improve in simulations using larger polymer
models and/or more concentrated solutions. In these systems, the variation
of the solvent-excluded volume per repeating unit at the transition
is smaller, as compared to a 30-mer at infinite dilution, and the
distinction between the results in TIP4P/2005 and TIP4P/Ice water
should then decrease. This aspect should thus be explored in future
studies. In summary, although the TIP4P/2005 model is often regarded
as the best available option close to room temperature, our work provides
evidence that in order to provide an adequate description of PNIPAM
affinity to water, it is preferable to work using the TIP4P/Ice model
across the whole investigated temperature range. This choice appears
to be even more crucial to appropriately model the pressure response
of the solution, particularly at high pressures, where the TIP4P/2005
model fails to reproduce the more hydrated globular state observed
for the TIP4P/Ice model and in experiments.
Authors: M Zanatta; L Tavagnacco; E Buratti; E Chiessi; F Natali; M Bertoldo; A Orecchini; E Zaccarelli Journal: J Chem Phys Date: 2020-05-29 Impact factor: 3.488