Literature DB >> 35490159

Revisiting the standard for modeling the spread of infectious diseases.

Michael Nikolaou1.   

Abstract

The COVID-19 epidemic brought to the forefront the value of mathematical modelling for infectious diseases as a guide to help manage a formidable challenge for human health. A standard dynamic model widely used for a spreading epidemic separates a population into compartments-each comprising individuals at a similar stage before, during, or after infection-and keeps track of the population fraction in each compartment over time, by balancing compartment loading, discharge, and accumulation rates. The standard model provides valuable insight into when an epidemic spreads or what fraction of a population will have been infected by the epidemic's end. A subtle issue, however, with that model, is that it may misrepresent the peak of the infectious fraction of a population, the time to reach that peak, or the rate at which an epidemic spreads. This may compromise the model's usability for tasks such as "Flattening the Curve" or other interventions for epidemic management. Here we develop an extension of the standard model's structure, which retains the simplicity and insights of the standard model while avoiding the misrepresentation issues mentioned above. The proposed model relies on replacing a module of the standard model by a module resulting from Padé approximation in the Laplace domain. The Padé-approximation module would also be suitable for incorporation in the wide array of standard model variants used in epidemiology. This warrants a re-examination of the subject and could potentially impact model-based management of epidemics, development of software tools for practicing epidemiologists, and related educational resources.
© 2022. The Author(s).

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Year:  2022        PMID: 35490159      PMCID: PMC9056532          DOI: 10.1038/s41598-022-10185-0

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.996


  27 in total

1.  A brief history of R0 and a recipe for its calculation.

Authors:  J A P Heesterbeek
Journal:  Acta Biotheor       Date:  2002       Impact factor: 1.774

2.  Community Mitigation Guidelines to Prevent Pandemic Influenza - United States, 2017.

Authors:  Noreen Qualls; Alexandra Levitt; Neha Kanade; Narue Wright-Jegede; Stephanie Dopson; Matthew Biggerstaff; Carrie Reed; Amra Uzicanin
Journal:  MMWR Recomm Rep       Date:  2017-04-21

3.  Special report: The simulations driving the world's response to COVID-19.

Authors:  David Adam
Journal:  Nature       Date:  2020-04       Impact factor: 49.962

Review 4.  The estimation of the basic reproduction number for infectious diseases.

Authors:  K Dietz
Journal:  Stat Methods Med Res       Date:  1993       Impact factor: 3.021

5.  The Lambert Function Should Be in the Engineering Mathematical Toolbox.

Authors:  Iordanis Kesisoglou; Garima Singh; Michael Nikolaou
Journal:  Comput Chem Eng       Date:  2021-02-17       Impact factor: 3.845

6.  Algorithmic discovery of dynamic models from infectious disease data.

Authors:  Jonathan Horrocks; Chris T Bauch
Journal:  Sci Rep       Date:  2020-04-27       Impact factor: 4.379

7.  Strategies for mitigating an influenza pandemic.

Authors:  Neil M Ferguson; Derek A T Cummings; Christophe Fraser; James C Cajka; Philip C Cooley; Donald S Burke
Journal:  Nature       Date:  2006-04-26       Impact factor: 49.962

8.  Ziegler and Nichols meet Kermack and McKendrick: Parsimony in dynamic models for epidemiology.

Authors:  Michael Nikolaou
Journal:  Comput Chem Eng       Date:  2021-12-01       Impact factor: 3.845

Review 9.  Inferred duration of infectious period of SARS-CoV-2: rapid scoping review and analysis of available evidence for asymptomatic and symptomatic COVID-19 cases.

Authors:  Andrew William Byrne; David McEvoy; Aine B Collins; Kevin Hunt; Miriam Casey; Ann Barber; Francis Butler; John Griffin; Elizabeth A Lane; Conor McAloon; Kirsty O'Brien; Patrick Wall; Kieran A Walsh; Simon J More
Journal:  BMJ Open       Date:  2020-08-05       Impact factor: 2.692

10.  Transparency assessment of COVID-19 models.

Authors:  Mohammad S Jalali; Catherine DiGennaro; Devi Sridhar
Journal:  Lancet Glob Health       Date:  2020-10-27       Impact factor: 26.763

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