Literature DB >> 35486347

Cortical Representation of Touch in Silico.

Chao Huang1, Fleur Zeldenrust2, Tansu Celikel3,4.   

Abstract

With its six layers and ~ 12,000 neurons, a cortical column is a complex network whose function is plausibly greater than the sum of its constituents'. Functional characterization of its network components will require going beyond the brute-force modulation of the neural activity of a small group of neurons. Here we introduce an open-source, biologically inspired, computationally efficient network model of the somatosensory cortex's granular and supragranular layers after reconstructing the barrel cortex in soma resolution. Comparisons of the network activity to empirical observations showed that the in silico network replicates the known properties of touch representations and whisker deprivation-induced changes in synaptic strength induced in vivo. Simulations show that the history of the membrane potential acts as a spatial filter that determines the presynaptic population of neurons contributing to a post-synaptic action potential; this spatial filtering might be critical for synaptic integration of top-down and bottom-up information.
© 2022. The Author(s).

Entities:  

Keywords:  Adaptation; Large-scale biophysical simulations; Plasticity; Somatosensory (barrel) cortex; Touch representation

Year:  2022        PMID: 35486347     DOI: 10.1007/s12021-022-09576-5

Source DB:  PubMed          Journal:  Neuroinformatics        ISSN: 1539-2791


  119 in total

1.  Synaptic basis for whisker deprivation-induced synaptic depression in rat somatosensory cortex.

Authors:  Kevin J Bender; Cara B Allen; Vanessa A Bender; Daniel E Feldman
Journal:  J Neurosci       Date:  2006-04-19       Impact factor: 6.167

2.  Two dynamically distinct inhibitory networks in layer 4 of the neocortex.

Authors:  Michael Beierlein; Jay R Gibson; Barry W Connors
Journal:  J Neurophysiol       Date:  2003-06-18       Impact factor: 2.714

3.  Spatiotemporal gating of sensory inputs in thalamus during quiescent and activated states.

Authors:  Juan R Aguilar; Manuel A Castro-Alamancos
Journal:  J Neurosci       Date:  2005-11-23       Impact factor: 6.167

4.  Visual physiology of the layer 4 cortical circuit in silico.

Authors:  Anton Arkhipov; Nathan W Gouwens; Yazan N Billeh; Sergey Gratiy; Ramakrishnan Iyer; Ziqiang Wei; Zihao Xu; Reza Abbasi-Asl; Jim Berg; Michael Buice; Nicholas Cain; Nuno da Costa; Saskia de Vries; Daniel Denman; Severine Durand; David Feng; Tim Jarsky; Jérôme Lecoq; Brian Lee; Lu Li; Stefan Mihalas; Gabriel K Ocker; Shawn R Olsen; R Clay Reid; Gilberto Soler-Llavina; Staci A Sorensen; Quanxin Wang; Jack Waters; Massimo Scanziani; Christof Koch
Journal:  PLoS Comput Biol       Date:  2018-11-12       Impact factor: 4.475

5.  Thalamocortical arbors extend beyond single cortical barrels: an in vivo intracellular tracing study in rat.

Authors:  P B Arnold; C X Li; R S Waters
Journal:  Exp Brain Res       Date:  2001-01       Impact factor: 1.972

6.  A network model of the barrel cortex combined with a differentiator detector reproduces features of the behavioral response to single-neuron stimulation.

Authors:  Davide Bernardi; Guy Doron; Michael Brecht; Benjamin Lindner
Journal:  PLoS Comput Biol       Date:  2021-02-08       Impact factor: 4.475

7.  Long-term depression induced by sensory deprivation during cortical map plasticity in vivo.

Authors:  Cara B Allen; Tansu Celikel; Daniel E Feldman
Journal:  Nat Neurosci       Date:  2003-03       Impact factor: 24.884

8.  Flow of excitation within rat barrel cortex on striking a single vibrissa.

Authors:  M Armstrong-James; K Fox; A Das-Gupta
Journal:  J Neurophysiol       Date:  1992-10       Impact factor: 2.714

Review 9.  Small-world brain networks.

Authors:  Danielle Smith Bassett; Ed Bullmore
Journal:  Neuroscientist       Date:  2006-12       Impact factor: 7.519

10.  Distinct mechanisms of spike timing-dependent LTD at vertical and horizontal inputs onto L2/3 pyramidal neurons in mouse barrel cortex.

Authors:  Abhishek Banerjee; Ana González-Rueda; Cassandra Sampaio-Baptista; Ole Paulsen; Antonio Rodríguez-Moreno
Journal:  Physiol Rep       Date:  2014-03-27
View more
  1 in total

1.  Large-scale biophysically detailed model of somatosensory thalamocortical circuits in NetPyNE.

Authors:  Fernando S Borges; Joao V S Moreira; Lavinia M Takarabe; William W Lytton; Salvador Dura-Bernal
Journal:  Front Neuroinform       Date:  2022-09-22       Impact factor: 3.739

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.