Literature DB >> 35486246

Comprehensive and Comparative Structural Glycome Analysis in Mouse Epiblast-like Cells.

Federico Pecori1, Hisatoshi Hanamatsu2, Jun-Ichi Furukawa3, Shoko Nishihara4,5.   

Abstract

Glycosylation is one of the most abundant posttranslational modifications and is involved in a wide range of cellular processes. Glycome diversity in mammals is generated by the action of over 200 distinct glycosyltransferases and related enzymes. Nevertheless, glycosylation dynamics are tightly coordinated to allow proper organismal development. Here, using mouse embryonic stem cells (mESCs) and mouse epiblast-like cells (mEpiLCs) as model systems, we describe a robust protocol that allows comprehensive and comparative structural analysis of the glycome.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Embryonic stem cells; Epiblast-like cells; Free oligosaccharides; Glycosaminoglycans; Glycosphingolipids; Glycosylation; N-Glycans; O-Glycans; Pluripotent stem cells

Mesh：

Year:  2022        PMID： 35486246     DOI： 10.1007/978-1-0716-2281-0_13

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN： 1064-3745


  10 in total

Review 1.  On the frequency of protein glycosylation, as deduced from analysis of the SWISS-PROT database.

Authors:  R Apweiler; H Hermjakob; N Sharon
Journal:  Biochim Biophys Acta       Date:  1999-12-06

2.  High throughput quantitative glycomics and glycoform-focused proteomics of murine dermis and epidermis.

Authors:  Rie Uematsu; Jun-ichi Furukawa; Hiroaki Nakagawa; Yasuro Shinohara; Kisaburo Deguchi; Kenji Monde; Shin-Ichiro Nishimura
Journal:  Mol Cell Proteomics       Date:  2005-09-16       Impact factor: 5.911

Review 3.  Control of mucin-type O-glycosylation: a classification of the polypeptide GalNAc-transferase gene family.

Authors:  Eric P Bennett; Ulla Mandel; Henrik Clausen; Thomas A Gerken; Timothy A Fritz; Lawrence A Tabak
Journal:  Glycobiology       Date:  2011-12-18       Impact factor: 4.313

Review 4.  Glycans in stem cell regulation: from Drosophila tissue stem cells to mammalian pluripotent stem cells.

Authors:  Shoko Nishihara
Journal:  FEBS Lett       Date:  2018-07-03       Impact factor: 4.124

5.  Simultaneous analysis of heparan sulfate, chondroitin/dermatan sulfates, and hyaluronan disaccharides by glycoblotting-assisted sample preparation followed by single-step zwitter-ionic-hydrophilic interaction chromatography.

Authors:  Yasuhiro Takegawa; Kayo Araki; Naoki Fujitani; Jun-ichi Furukawa; Hiroaki Sugiyama; Hideaki Sakai; Yasuro Shinohara
Journal:  Anal Chem       Date:  2011-11-16       Impact factor: 6.986

6.  Free oligosaccharides to monitor glycoprotein endoplasmic reticulum-associated degradation in Saccharomyces cerevisiae.

Authors:  Hiroto Hirayama; Junichi Seino; Toshihiko Kitajima; Yoshifumi Jigami; Tadashi Suzuki
Journal:  J Biol Chem       Date:  2010-02-11       Impact factor: 5.157

7.  A versatile method for analysis of serine/threonine posttranslational modifications by β-elimination in the presence of pyrazolone analogues.

Authors:  Jun-ichi Furukawa; Naoki Fujitani; Kayo Araki; Yasuhiro Takegawa; Kota Kodama; Yasuro Shinohara
Journal:  Anal Chem       Date:  2011-11-01       Impact factor: 6.986

8.  Sialic Acid Linkage Specific Derivatization of Glycosphingolipid Glycans by Ring-Opening Aminolysis of Lactones.

Authors:  Hisatoshi Hanamatsu; Takashi Nishikaze; Nobuaki Miura; Jinhua Piao; Kazue Okada; Sadanori Sekiya; Shinichi Iwamoto; Naoya Sakamoto; Koichi Tanaka; Jun-Ichi Furukawa
Journal:  Anal Chem       Date:  2018-10-29       Impact factor: 6.986

Review 9.  Biological roles of glycans.

Authors:  Ajit Varki
Journal:  Glycobiology       Date:  2016-08-24       Impact factor: 4.313

10.  A defined glycosylation regulatory network modulates total glycome dynamics during pluripotency state transition.

Authors:  Federico Pecori; Ikuko Yokota; Hisatoshi Hanamatsu; Taichi Miura; Chika Ogura; Hayato Ota; Jun-Ichi Furukawa; Shinya Oki; Kazuo Yamamoto; Osamu Yoshie; Shoko Nishihara
Journal:  Sci Rep       Date:  2021-01-14       Impact factor: 4.379
  10 in total

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