Literature DB >> 35482104

Mechanisms of gene regulation by histone degradation in adaptation of yeast: an overview of recent advances.

Safir Ullah Khan1, Munir Ullah Khan2, Fadia Kalsoom3, Muhammad Imran Khan4,5,6, Shuang Gao7, Ahsanullah Unar7, Muhammad Zubair7,8, Muhammad Bilal9.   

Abstract

Histones are important component of eukaryotic cells chromatin and consist of arginine and lysine residues. Histones play an important role in the protection of DNA. Their contents significantly affect high-level chromatin structure formation, gene expression, DNA replication, and other important life activities. Protein degradation is an important regulatory mechanism of histone content. Recent studies have revealed that modification of amino acid sequence is directly related to histone breakdown. In addition, histone degradation is closely related to covalent modifications, such as ubiquitination and acetylation, which are considered to be driving factors in gene regulation. Gene regulation is an important mechanism in adaptation to the environment and survival of species. With the introduction of highly efficient technology, various mutations in histones have been identified in yeast. In the field of epigenetics and the transmission of chromatin states, two widely used model organisms are the budding yeast Saccharomyces cerevisiae and Schizosaccharomyces pombe. Higher eukaryotes can use their silent loci to maintain their epigenetic states and providing the base to investigate mechanisms underlying development. Therfore, both species have contributed a plethora of information on these mechanisms in both yeast and higher eukaryotes. This study focuses on the role of histone modifications in controlling telomeric silencing in Saccharomyces cerevisiae and centromeric silencing in S. pombe as examples of genetic loci that demonstrate epigenetic inheritance. In view of recent advances, this review focuses on the post-translational modification of histone amino acid residues and reviews the relationship between histone degradation and amino acid residue modification.
© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  Biological significance; Environmental factors; Histone; Post-translational modifications; Survival and apoptosis

Mesh:

Substances:

Year:  2022        PMID: 35482104     DOI: 10.1007/s00203-022-02897-8

Source DB:  PubMed          Journal:  Arch Microbiol        ISSN: 0302-8933            Impact factor:   2.552


  101 in total

Review 1.  Emerging roles for chromatin as a signal integration and storage platform.

Authors:  Aimee I Badeaux; Yang Shi
Journal:  Nat Rev Mol Cell Biol       Date:  2013-04       Impact factor: 94.444

Review 2.  Regulation of chromatin by histone modifications.

Authors:  Andrew J Bannister; Tony Kouzarides
Journal:  Cell Res       Date:  2011-02-15       Impact factor: 25.617

3.  Histone H2B deacetylation at lysine 11 is required for yeast apoptosis induced by phosphorylation of H2B at serine 10.

Authors:  Sung-Hee Ahn; Robert L Diaz; Michael Grunstein; C David Allis
Journal:  Mol Cell       Date:  2006-10-20       Impact factor: 17.970

4.  H2B (Ser10) phosphorylation is induced during apoptosis and meiosis in S. cerevisiae.

Authors:  Sung-Hee Ahn; Kiersten A Henderson; Scott Keeney; C David Allis
Journal:  Cell Cycle       Date:  2005-06-14       Impact factor: 4.534

Review 5.  Constructing and decoding unconventional ubiquitin chains.

Authors:  Christian Behrends; J Wade Harper
Journal:  Nat Struct Mol Biol       Date:  2011-05       Impact factor: 15.369

Review 6.  Cell-cycle involvement in autophagy and apoptosis in yeast.

Authors:  Maria Azzopardi; Gianluca Farrugia; Rena Balzan
Journal:  Mech Ageing Dev       Date:  2016-07-19       Impact factor: 5.432

7.  Stress-activated genomic expression changes serve a preparative role for impending stress in yeast.

Authors:  David B Berry; Audrey P Gasch
Journal:  Mol Biol Cell       Date:  2008-08-27       Impact factor: 4.138

8.  The histone deacetylase Rpd3p is required for transient changes in genomic expression in response to stress.

Authors:  Adriana L Alejandro-Osorio; Dana J Huebert; Dominic T Porcaro; Megan E Sonntag; Songdet Nillasithanukroh; Jessica L Will; Audrey P Gasch
Journal:  Genome Biol       Date:  2009-05-26       Impact factor: 13.583

Review 9.  The molecular hallmarks of epigenetic control.

Authors:  C David Allis; Thomas Jenuwein
Journal:  Nat Rev Genet       Date:  2016-06-27       Impact factor: 53.242

10.  Replication stress inhibits synthesis of histone mRNAs in yeast by removing Spt10p and Spt21p from the histone promoters.

Authors:  Madhura Bhagwat; Shreya Nagar; Pritpal Kaur; Riddhi Mehta; Ivana Vancurova; Ales Vancura
Journal:  J Biol Chem       Date:  2021-09-25       Impact factor: 5.157

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