| Literature DB >> 35479277 |
Jun Liu1, Liangqiu Tang1, Qiqi Lu1, Yi Yu1,2, Qiu-Gui Xu2, Shanqiang Zhang1, Yun-Xian Chen1, Wen-Jie Dai1, Ji-Cheng Li1,2,3,4.
Abstract
This study was aimed to determine the association between potential plasma lipid biomarkers and early screening and prognosis of Acute myocardial infarction (AMI). In the present study, a total of 795 differentially expressed lipid metabolites were detected based on ultra-performance liquid chromatography tandem mass spectrometry (UPLC-MS/MS). Out of these metabolites, 25 lipid metabolites were identified which showed specifical expression in the AMI group compared with the healthy control (HC) group and unstable angina (UA) group. Then, we applied the least absolute shrinkage and selection operator (LASSO) and support vector machine-recursive feature elimination (SVM-RFE) methods to obtain three lipid molecules, including CarnitineC18:1-OH, CarnitineC18:2-OH and FFA (20:1). The three lipid metabolites and the diagnostic model exhibited well predictive ability in discriminating between AMI patients and UA patients in both the discovery and validation sets with an area under the curve (AUC) of 0.9. Univariate and multivariate logistic regression analyses indicated that the three lipid metabolites may serve as potential biomarkers for diagnosing AMI. A subsequent 1-year follow-up analysis indicated that the three lipid biomarkers also had prominent performance in predicting re-admission of patients with AMI due to cardiovascular events. In summary, we used quantitative lipid technology to delineate the characteristics of lipid metabolism in patients with AMI, and identified potential early diagnosis biomarkers of AMI via machine learning approach.Entities:
Keywords: AMI; UPLC-MS/MS; lipid metabolites; machine learning; quantitative lipid profile
Year: 2022 PMID: 35479277 PMCID: PMC9037999 DOI: 10.3389/fcvm.2022.848840
Source DB: PubMed Journal: Front Cardiovasc Med ISSN: 2297-055X
The clinical information of patients.
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| Sex | Male | 21 | 21 | 23 | 21 | 23 |
| Female | 9 | 9 | 7 | 9 | 7 | |
| Age | < =60 | 14 | 13 | 14 | 13 | 15 |
| >60 | 16 | 17 | 16 | 17 | 15 | |
| CKMB | 15.35 | 54.45 | 13.75 | 37.5 | ||
| (13.43, 18.48) | (23.77, 194.47) | (11.03, 17.88) | (24.6, 160.8) | |||
| TC | 4.88 ± 0.86 | 4.85 ± 1.05 | 4.57 ± 1.06 | 5.13 ± 1.25 | ||
| TG | 1.77 ± 1.31 | 1.34 ± 0.84 | 1.48 ± 0.66 | 1.57 ± 1.14 | ||
| HDL | 1.23 ± 0.29 | 1.27 ± 0.73 | 1.15 ± 0.21 | 1.13 ± 0.23 | ||
| LDL | 2.88 ± 0.79 | 2.94 ± 0.9 | 2.65 ± 0.81 | 3.1 ± 1.04 | ||
Figure 1The workflow of this study.
Figure 2Identification of lipid components and orthogonal partial least squares discriminant analysis (OPLS-DA). Circular diagram of lipid subclass composition in healthy control (HC) group (A), unstable angina (UA) group (B), and acute myocardial infarction (AMI) group (C,D). Total detected lipid subclasses and the number of lipid compounds contained in each subclass. OPLS-DA score plot in AMI vs. HC (E) and AMI vs. UA (F).
Figure 3Screening and enrichment analysis of differential lipid metabolites. (A) Volcano plot showing differential lipid metabolites between AMI and HC. (B) KEGG enrichment analysis for differential lipid metabolites between AMI and HC. (C) Volcano plot showing differential lipid metabolites between AMI and UA. (D) KEGG enrichment analysis for differential lipid metabolites between AMI and UA.
Figure 4Acquisition of common differential lipid metabolites. (A). Venn diagram shows the common differential lipid metabolites between the group. (B). The annotation results are classified according to the type of KEGG pathway. (C). KEGG pathway enrichment analysis for common differential lipid metabolites. (D). A cluster analysis of common differential lipid metabolites.
Figure 5Identification of lipid diagnostic biomarkers. (A) LASSO and (B) SVM-RFE algorithms in the discovery set. (C) Veen diagram shows the lipid biomarkers selected by the LASSO and SVM-RFE algorithms. (D) Correlation analysis between lipid biomarkers and routine clinical indexes. (E) The diagnostic performance of lipid biomarkers in distinguishing AMI from UA was evaluated by ROC analysis in discovery set. (F) The diagnostic performance of diagnostic model in distinguishing AMI from UA was evaluated by ROC analysis in discovery set.
Figure 6The diagnostic efficacy of lipid biomarkers in AMI. (A) The diagnostic performance of lipid biomarkers in distinguishing AMI from HC was evaluated by ROC analysis in discovery set. (B) The diagnostic performance of diagnostic model in distinguishing AMI from HC was evaluated by ROC analysis in discovery set. (C) The diagnostic performance of lipid biomarkers in distinguishing AMI from UA was evaluated by ROC analysis in validation set. (D) The diagnostic performance of diagnostic model in distinguishing AMI from UA was evaluated by ROC analysis in validation set. (E) The diagnostic performance of lipid biomarkers in distinguishing AMI from UA was evaluated by ROC analysis in whole set. (F) The diagnostic performance of diagnostic model in distinguishing AMI from UA was evaluated by ROC analysis in whole set.
Univariate and multivariate logistic regression in discovery set.
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| CK-MB | 1.132 (1.040–1.233) | 0.004 | NA | NA |
| TC | 0.970 (0.567–1.660) | 0.913 | NA | NA |
| TG | 0.677 (0.404–1.137) | 0.140 | NA | NA |
| TC/TG | 1.195 (0.944–1.513) | 0.139 | NA | NA |
| HDL-C | 1.156 (0.448–2.979) | 0.765 | NA | NA |
| LDL-C | 1.081 (0.589–1.986) | 0.801 | NA | NA |
| CarnitineC18:1-OH | 2.394 (1.468–3.905) | <0.001 | 2.106 (1.212–3.659) | 0.008 |
| CarnitineC18:2-OH | 7.502 (2.367–23.769) | <0.001 | 5.124 (1.415–18.557) | 0.013 |
| FFA (20:1) | 2.682 (1.614–4.456) | <0.001 | 2.163 (1.231–3.800) | 0.007 |
Univariate and multivariate logistic regression in validation set.
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| CK-MB | 1.145 (1.049–1.249) | 0.002 | 1.156 (1.034–1.292) | 0.011 |
| TC | 1.546 (0.959–2.490) | 0.074 | NA | NA |
| TG | 1.107 (0.632–1.939) | 0.723 | NA | NA |
| TC/TG | 1.298 (0.980–1.718) | 0.069 | NA | NA |
| HDL-C | 0.677 (0.064–7.146) | 0.746 | NA | NA |
| LDL-C | 1.724 (0.951–3.128) | 0.073 | NA | NA |
| CarnitineC18:1-OH | 1.838 (1.291–2.615) | <0.001 | 1.960 (1.084–3.546) | 0.026 |
| CarnitineC18:2-OH | 2.927 (1.459–5.870) | 0.002 | 4.839 (1.127–20.774) | 0.034 |
| FFA (20:1) | 2.157 (1.455–3.196) | <0.001 | 2.098 (1.274–3.454) | 0.004 |
Figure 7Prognostic evaluation of lipid biomarkers and expression in AMI patients. Expression level of lipid biomarkers in discovery set (A) and validation set (B). The prognostic evaluation of lipid biomarkers (C) and model (D) in whole set. ***P < 0.001.