| Literature DB >> 35479020 |
Kun-Lin Liu1, Fei Teng1, Lu Xiong1, Xiao Li1, Chao Gao2, Luo-Ting Yu1.
Abstract
Tuberculosis (TB), an infectious disease caused by Mycobacterium tuberculosis (M. tuberculosis), is an important public health issue. Current first-line drugs administered to TB patients have been in use for over 40 years, whereas second-line drugs display strong side effects and poor compliance. Additionally, designing effective regimens to treat patients infected with multi- and extremely-drug-resistant (MDR and XDR) strains of TB is challenging. In this report, we screened our compound library and identified compound 1 with antituberculosis activity and a minimal inhibitory concentration (MIC) against M. tuberculosis of 20 μg mL-1. Structure optimization and the structure-activity relationship of 1 as the lead compound enabled the design and synthesis of a series of quinolone derivatives, 6a1-6a2, 6b1-6b36, 6c1, 6d1-6d14, 7a1-7a2, 7b1-7b2, 7c1, 8a1-8a5, 9a1-9a4 and 10a1-10a6. These compounds were evaluated in vitro for anti-tubercular activity against the M. tuberculosis H37Rv strain. Among them, compounds 6b6, 6b12 and 6b21 exhibited MIC values in the range of 1.2-3 μg mL-1 and showed excellent activity against the tested MDR-TB strain (MIC: 3, 2.9 and 0.9 μg mL-1, respectively). All three compounds were non-toxic toward A549 and Vero cells (>100 and >50 μg mL-1, respectively). In addition, an antibacterial spectrum test carried out using compound 6b21 showed that this compound specifically inhibits M. tuberculosis. These can serve as a new starting point for the development of anti-TB agents with therapeutic potential. This journal is © The Royal Society of Chemistry.Entities:
Year: 2021 PMID: 35479020 PMCID: PMC9036655 DOI: 10.1039/d0ra09250a
Source DB: PubMed Journal: RSC Adv ISSN: 2046-2069 Impact factor: 4.036
Scheme 1General synthesis of acetyl cyclohexanone and its analogues. Reagents and conditions: (i) toluene, morpholine, p-toluenesulfonic, reflux, overnight. (ii) DCM, triethylamine, −5 °C; C2H3ClO, rt, overnight.
Scheme 2
Scheme 3Reagents and conditions: (i) ethanol, 2-cyanoacetamide, triethylenediamine, 40 °C, 10 hours. (ii) methanol and ammonia (1 : 1), H2, RANEY®-nickel, 80 °C, 36 h. (iii) DCM, EDCI, HOBT, and 4-methylmorpholine, rt, 10 hours.
Scheme 4Reagents and conditions: (i) ammonium acetate, 120 °C, 8 hours. (ii) H2, RANEY®-nickel, 80 °C, overnight. (iii) DCM, EDCI, HOBT, and 4-methylmorpholine, rt, 10 hours. (iv) DIEA, 5b, −30 °C, 30 min; 4-(trifluoromethyl)benzyl bromide, −30 °C, over 4 hours. (v) DCM, 0 °C, 4-(trifluoromethyl)benzene-1-sulfonyl chloride slowly drops, triethylamine, 30 min. (vi) Methanol, NaOH, sealed tube, 120 °C, overnight. (vii) DCM, thionyl chloride, N,N-dimethylformamide, 0 °C, 3 hours. (viii) 4-(Trifluoromethyl)benzhydrazide, pyridine 4-dimethylaminopyridine, rt, 6 hours, getting intermediate. (ix) Dried DCM, trifluoromethanesulfonic anhydride, triphenylphosphine oxide, stirred for 5 min, intermediate was added, rt, 7 hours.
Fig. 1The design strategy for compound 1.
Effect of the side chain biphenyl on anti-TB activity. Antimycobacterial activities of the target compounds against M. tuberculosis H37Rv
|
| ||||
|---|---|---|---|---|
| Compound no. | R | % inhibition | MIC | ClogP |
| 6b1 |
| NA | NA | 4.26 |
| 6b2 |
| NA | NA | 4.05 |
| 6b3 |
| NA | NA | 4.28 |
| 6b4 |
| 98.3% | 25 | 4.05 |
| 6b5 |
| 43.6% | >25 | 4.05 |
| 6b6 |
| 99.8% | 3 | 4.11 |
| 6b7 |
| 54.7% | NA | 3.76 |
| 6b8 |
| 36.9% | NA | 5.16 |
| 6b9 |
| 93.7% | 7.2 | 4.55 |
| 6b10 |
| 93.1% | 15 | 4.26 |
| 6b11 |
| 64.3% | NA | 4.29 |
| Isoniazid | — | 98.9% | 0.25 | −0.67 |
The inhibition rate is the average of the three measurements.
MIC90 is the average value of three measurements.
ClogP is calculated by ChemBioDraw Ultra.
Effect of the side chain phenyl on anti-TB activity
|
| ||||
|---|---|---|---|---|
| Compound no. | R | % inhibition 25 μg mL−1 | MIC (μg mL−1) | ClogP |
| 6b12 |
| 99.3% | 2.5 | 3.42 |
| 6b13 |
| 33.3% | NA | 2.21 |
| 6b14 |
| 45.1% | NA | 3.42 |
| 6b15 |
| 64.2% | NA | 3.50 |
| 6b16 |
| 13.3% | NA | 2.39 |
| 6b17 |
| NA | NA | 2.53 |
| 6b18 |
| 26.9% | NA | 2.55 |
| 6b19 |
| 12.6% | NA | 2.36 |
| 6b20 |
| 34.5% | NA | 3.58 |
| Isoniazid | 98.9% | 0.25 | −0.67 | |
Effect of the side chain heterocycle on anti-TB activity
|
| |||||
|---|---|---|---|---|---|
| Compound no. | R | % inhibition 20 μg mL−1 | MIC (μg mL−1) | Solubility (μg mL−1) | ClogP |
| 6b21 |
| 100% | 1.2 | 132.4 | 2.77 |
| 6b22 |
| 22.3% | NA | 102.2 | 2.42 |
| 6b23 |
| 12.3% | NA | 145.6 | 1.57 |
| 6b24 |
| 98.3% | 4.9 | 213.4 | 2.23 |
| 6b25 |
| 98.9% | 3.2 | 239.0 | 2.37 |
| 6b26 |
| 94.1% | 1.6 | 113.5 | 1.66 |
| 6b27 |
| 98.6% | 1.3 | 184.0 | 1.93 |
| 6b28 |
| 98.9% | 2.3 | 144.2 | 1.32 |
| 6b29 |
| 100.0% | 2.8 | 203.5 | 1.34 |
| 6b30 |
| 78.2% | NA | 178.3 | 1.54 |
| 6b31 |
| 97.7% | 3.4 | 101.0 | 2.43 |
| 6b32 |
| 96.4% | 5.4 | 129.6 | 2.10 |
| 6b33 |
| 98.3% | 2.0 | 100.2 | 2.60 |
| 6b34 |
| NA | NA | 97.4 | 1.72 |
| 6b35 |
| 94.6% | 14 | 245.7 | 1.13 |
| 6b36 |
| 25.1% | — | 279.5 | 0.97 |
| Isoniazid | 98.9% | 0.25 | NA | −0.67 | |
Effect of the quinolone derivatives parent nucleus on Anti-TB Activity
|
| ||||
|---|---|---|---|---|
| Compound no. | R | % inhibition 50 μg mL−1 | MIC (μg mL−1) | ClogP |
| 6d1 |
| NA | >50 | 2.37 |
| 6d2 |
| NA | >50 | 1.97 |
| 6d3 |
| NA | >50 | 1.88 |
| 6d4 |
| NA | >25 | 4.06 |
| 6d5 |
| 100% | 5.5 | 2.05 |
| 6d6 |
| 100% | 24.1 | 2.37 |
| 6d7 |
| 99% | 26.3 | 2.28 |
| 6d8 |
| NA | >50 | 3.41 |
| 6d9 |
| 18% | >50 | 3.70 |
| 6d10 |
| NA | >50 | 3.23 |
| 6d11 |
| NA | >50 | 2.33 |
| 6d12 |
| NA | >50 | 1.61 |
| 6d13 |
| NA | >50 | 2.18 |
| 6d14 |
| NA | >50 | 1.49 |
| 9a1 |
| 2% | >50 | 2.18 |
| 9a2 |
| 15% | >50 | 3.87 |
| 9a3 |
| 13% | >50 | 3.51 |
| 9a4 |
| 3% | >50 | 4.79 |
| 6a1 |
| 53% | >50 | 1.54 |
| 6a2 |
| 14% | >50 | 1.09 |
| 6c1 |
| 33% | >50 | 2.93 |
| Isoniazid | 98.9% | 0.25 | −0.67 | |
Effect of the opening of parallel ring on anti-TB activity
|
| ||||||
|---|---|---|---|---|---|---|
| Compound no. | R | R1 | R2 | % inhibition 20 μg mL−1 | MIC (μg mL−1) | ClogP |
| 7a1 |
|
|
| 5% | >20 | 1.74 |
| 7a2 |
|
|
| 21% | >20 | 3.43 |
| 7b1 |
|
|
| NA | >12.5 | 2.90 |
| 7b2 |
|
|
| 33% | >20 | 4.58 |
| 7c1 |
|
|
| NA | >20 | 2.03 |
| 8a1 |
|
|
| 75.3% | NA | 0.41 |
| 8a2 |
|
|
| 98.2% | NA | 0.94 |
| 8a3 |
|
|
| 98.1% | 19.8 | 1.47 |
| 8a4 |
|
|
| 87.6% | NA | 2.30 |
| 8a5 |
|
|
| 94.4% | 6.7 | 2.36 |
| Isoniazid | 99.4% | 0.25 | −0.67 | |||
Effect of the linker moiety on the anti-TB activity
|
| ||||
|---|---|---|---|---|
| Compound no. | % inhibition 20 μg mL−1 | MIC (μg mL−1) | ClogP | |
| 10a1 |
| 65.7% | NA | 2.91 |
| 10a2 |
| 92.7% | 3.5 | 2.67 |
| 10a3 |
| NA | NA | 3.5 |
| 10a4 |
| 36.8% | NA | 3.69 |
| 10a5 |
| 99.3% | 20 | 2.96 |
| 10a6 |
| NA | >50 | 2.32 |
| Isoniazid | 99.4% | 0.25 | −0.67 | |
Activity of 6b6, 6b12, 6b21 against drug-resistant strains
| Compound no. | Structure | MDR–MTB |
|---|---|---|
| 6b6 |
| 3.0 |
| 6b12 |
| 2.9 |
| 6b21 |
| 0.9 |
MDR–MTB: resistant to INH and RIF.
Cytotoxic activity of quinolone derivatives against A459 and Vero cell line
| Compound no. | IC50 (μg mL−1) | Selectivity index | ||
|---|---|---|---|---|
| A549 | Vero | A549 | Vero | |
| 6b6 | >100 | >50 | >33 | >16 |
| 6b12 | >100 | >50 | >40 | >20 |
| 6b21 | >100 | >50 | >111 | >55 |
| 6b26 | >100 | >50 | >63 | >31 |
| 6b29 | >100 | >50 | >35 | >17 |
| 6b33 | >100 | >50 | >50 | >25 |
IC50(A549/Vero)/MIC M. tb.
Antibacterial spectrum test of compound 6b21
| Bacterial strains | MIC (μg mL−1) | Bacteria control+/− | |
|---|---|---|---|
| Compound 6b21 | Levofloxacin tablets | ||
|
| >128 | 16 | + |
|
| >128 | <0.008 | + |
|
| >128 | 0.03 | + |
|
| >128 | <0.008 | + |
|
| >128 | 0.25 | + |
|
| >128 | 16 | + |
|
| >128 | <0.008 | + |
|
| >128 | 64 | + |
|
| >128 | <0.008 | + |
Escherichia coli ATCC25922 was the standard strain, and the rest were clinical bacteria.
| Analysis time | Mobile phase A (%) | Mobile phase B (%) |
|---|---|---|
| 0.00 | 40 | 60 |
| 10.00 | 40 | 60 |