Xiuling Wen1, Peiquan Lu1, Yong Shen1, Haojie Peng1, Zhuofeng Ke2, Cunyuan Zhao1. 1. MOE Key Laboratory of Bioinorganic and Synthetic Chemistry, School of Chemistry, Sun Yat-sen University, Guangzhou 510275, P. R. China. 2. MOE Key Laboratory of Bioinorganic and Synthetic Chemistry, School of Chemistry, School of Materials Science and Engineering, Sun Yat-sen University, Guangzhou 510275, P. R. China.
Abstract
Metal-free boron Lewis acids, tris(pentafluorophenyl)borane B(C6F5)3, have the advantages of low toxicity and low cost and are a promising catalyst. A density functional theory (DFT) calculation was used to clarify the mechanism and the origin of the diastereoselective cyclopropanation of aryldiazodiacetate and styrene derivatives catalyzed by B(C6F5)3. Four pathways were calculated: B(C6F5)3-catalyzed N-, C-, and O-bound boron-activated aryldiazodiacetate and without B(C6F5)3 catalysis. By calculating and comparing the energy barriers, the most possible reaction mechanism was proposed, that is, first, B(C6F5)3 catalyzed O-bound boron to activate aryldiazodiacetate, followed by the removal of a N2 molecule, and finally, styrene nucleophilic attack occurred to produce [2+1] cyclopropane products. N2 removal is the rate-limiting step, and this step determines the preference of a given mechanism. The calculated results are in agreement with experimental observations. The origin of diastereoselectivity is further explained on the basis of the favorable mechanism. The steric hindrance interference between the styrene aryl group and the large tri(pentafluorophenyl)borane B(C6F5)3 and the favorable π-π stacking interaction between the benzene rings combined to cause the high diastereoselectivity, which resulted in lower energy of the transition state (TS) corresponding to the reaction mechanism. The calculated results not only provide a more detailed explanation of the mechanism for the experimental study but also have certain reference and guiding significance for other catalytic cyclopropanation reactions.
Metal-free boron Lewis acids, tris(pentafluorophenyl)borane B(C6F5)3, have the advantages of low toxicity and low cost and are a promising catalyst. A density functional theory (DFT) calculation was used to clarify the mechanism and the origin of the diastereoselective cyclopropanation of aryldiazodiacetate and styrene derivatives catalyzed by B(C6F5)3. Four pathways were calculated: B(C6F5)3-catalyzed N-, C-, and O-bound boron-activated aryldiazodiacetate and without B(C6F5)3 catalysis. By calculating and comparing the energy barriers, the most possible reaction mechanism was proposed, that is, first, B(C6F5)3 catalyzed O-bound boron to activate aryldiazodiacetate, followed by the removal of a N2 molecule, and finally, styrene nucleophilic attack occurred to produce [2+1] cyclopropane products. N2 removal is the rate-limiting step, and this step determines the preference of a given mechanism. The calculated results are in agreement with experimental observations. The origin of diastereoselectivity is further explained on the basis of the favorable mechanism. The steric hindrance interference between the styrene aryl group and the large tri(pentafluorophenyl)borane B(C6F5)3 and the favorable π-π stacking interaction between the benzene rings combined to cause the high diastereoselectivity, which resulted in lower energy of the transition state (TS) corresponding to the reaction mechanism. The calculated results not only provide a more detailed explanation of the mechanism for the experimental study but also have certain reference and guiding significance for other catalytic cyclopropanation reactions.
Cyclopropane,
a widely used discordant carbocyclic ring, is usually
synthesized by [2+1] cycloaddition.[1−6] Methods for synthesizing cyclopropane are crucial in the fields
of drug discovery, chemical biology, and total synthesis. Some of
the most effective cyclopropane synthesis methods depend on the activation
of carbene precursors, such as diazoacetic acid, and transient metal
carbene species have been generated using transition-metal catalysts.[7] Despite the success of transition-metal catalysts,
more sustainable and environmentally friendly systems for cyclopropanation/functionalization
have attracted increasing attention. Compared with transition-metal
catalysts, metal-free boron Lewis acids, such as tris(pentafluorophenyl)borane
B(C6F5)3 and B(C6F5)H, have the advantages of low toxicities and low costs.[8,9] Moreover, reactions catalyzed by such metal-free boron Lewis acids
exhibit different characteristics compared to mature transition-metal
catalytic reactions.[10]In recent
years, Lewis acid and Brønsted acid (containing
H bonds) catalytically activated diazocarbonyl compounds have attracted
significant attention. However, these transformations are mainly confined
to X–H insertion (X = N, O, and C).[11] Boron Lewis acids have proven to be effective metal-free catalysts
for highly selective reactions of donor and acceptor diazo compounds
with a series of substrates. In 2014, Mattson and co-workers[12] reported the N–H insertion reaction between
aniline and α-nitrodiazide activated by a thiourea catalyst.
In 2016, Yu et al.[13] reported the B(C6F5)3-activated ortho-selective C–H insertion reaction of aryldiazoacetate and
phenol, and Zhang et al.[14] subsequently
clarified the root of chemical selectivity and regioselectivity through
theoretical calculations. In 2017, Tang et al.[15] conducted research on the 1,1-hydroboration reaction of
Ph2CN2 with HB(C6F5)2. However, using inactivated alkenes to produce cyclopropane
with boron Lewis acids has rarely been reported.In 2020, Melen
et al.[16] first reported
the regioselective and diastereoselective C–H insertion, cyclopropanation,
and ring-opening reactions of aryldiazodiacetate with a series of
substrates (including indole, benzofuran, indene, pyrrole, styrene,
and furan) under mild conditions. They also reported the mechanism
of these reactions using comprehensive density functional theory (DFT)
research to fully understand the regioselectivity and diastereoselectivity
they observed. Almost at the same time, Mancinelli and Wilkerson-Hill[17] reported the diastereoselective cyclopropanation
of aryldiazodiacetate and styrene derivatives catalyzed by B(C6F5)3 (Scheme a). Based on the available experimental and
computational background,[14,18] Mancinelli and Wilkerson-Hill[17] proposed a possible reaction mechanism of aryldiazodiacetate
O-bound boron activated by B(C6F5)3 (pathway C, Scheme b). In 2021, Yang et al.[19] calculated
and studied the boron–O binding mechanism of cyclopropanation
of styrene and aryldiazodiacetate catalyzed by B(C6F5)3 using density functional theory (DFT) and explained
the origin of diastereoselectivity, in which the steric hindrance
interference between the styrene aryl group and the bulky tri(pentafluorophenyl)borane
catalyst played an important role in determining diasteroselectivity.
However, there are many active sites on aryldiazodiacetate, and the
competition between aryldiazodiacetate N-, C-, and O-bound boron activated
by B(C6F5)3 complicates the reaction
mechanism. In this study, to probe the reaction mechanism in detail
and clarify the origin of diastereoselectivity, various pathways were
investigated using DFT calculations, including B(C6F5)3-catalyzed N-bound boron activation (pathway
A), C-bound boron activation (pathway B), and O-bound boron activation
(pathway C, Scheme b) as well as without B(C6F5)3 catalysis
(pathway D). The most plausible reaction mechanism was proposed by
comparing these pathways. The calculated results are in agreement
with experimental observations.[17] Based
on the most favorable mechanism, combined with frontier orbital analysis
and distortion/interaction analysis, the origin of diastereoselectivity
was explained, in which the favorable π–π stacking
between aryldiazodiacetate and styrene aryl plays an important role
in determining diastereoselectivity. The calculated results not only
verified the experimental findings but also provided a more reliable
mechanistic explanation for this reaction, which can provide guidance
for other catalytic cyclopropanation reactions.
Scheme 1
(a) Cyclopropanation
of Styrene and Aryldiazodiacetate Catalyzed
by B(C6F5)3 and (b) Proposed Mechanisms
Computational Details
According to the experimental work, p-phenyldiazonium
bromide and styrene were selected as the model substrates in this
study. The reaction temperature is 323.15 K, and 1,2-dichloroethane
(1,2-DCE) is used as the solvent for the reaction.[17] All of the calculations in this paper are carried out in
the Gaussian 09[20] software package. All
reactants and transition states are optimized in the solvent phase,
and the B3LYP-D3[21] calculation method is
adopted, in which nonmetallic atoms such as C, H, N, O, B, F, and
Br are carried out at the 6-31G* basis group level. The single-point
energy is calculated using the SMD solvation model, and the calculation
method is B3LYP-D3, where the basis set used for nonmetallic atoms
such as C, H, N, O, B, F, and Br is 6-311++G**. The internal coordinate
of the reaction (IRC) is calculated,[22] the
selected key transition state structure relative to the corresponding
reactants and products is determined, and the analytical resonance
frequency indicates the transition state (one virtual frequency) and
stable structure (no virtual frequency) at the same theoretical level.
An optimized 3D structure image is made using CYLview[23] software, and LUMO frontier orbits are made using GaussView
5.0[20] software. Noncovalent interaction
analysis is performed with Multiwfn[24] software.
Results and Discussion
Mechanism of the Cyclopropanation
of Styrene
and Aryldiazodiacetate Catalyzed by Tris(pentafluorophenyl)borane
Mechanism A of Activating N-Bound Boron
The mechanism
for N-bound boron activation in the aryldiazodiacetate
substrate was considered to involve styrene nucleophilic attack +
N2 removal (pathway A1, red lines, Figure ). The nucleophilic attack of styrene on IN1A proceeds through the transition state TS1A, which has a Gibbs free energy of 28.0 kcal/mol, resulting in a
N-containing five-membered cyclic compound (IN2A) as
an intermediate. Subsequently, the ternary carbocyclic ring is constructed
through the transition state TS2A (Gibbs free energy
of 41.0 kcal/mol). Finally, N2 and B(C6F5)3 are removed to produce 3a. We ruled
out this process because of its high energy barrier (41.0 kcal/mol).
Meanwhile, we also considered the N-bound boron activation mechanism
involving N2 removal + styrene nucleophilic attack (pathway
A2, green lines, Figure ). As the free energy of the transition state TS1A-N is 36.9 kcal/mol, we also excluded this
process. In conclusion, for aryldiazodiacetate 1a, the
N-bound boron activation mechanisms are not feasible.
Figure 1
N/C-bound boron activation
mechanisms for the aryldiazodiacetate
substrate (pathways A/B). Free energies (kcal/mol) are relative to 1a.
N/C-bound boron activation
mechanisms for the aryldiazodiacetate
substrate (pathways A/B). Free energies (kcal/mol) are relative to 1a.
Mechanism
B of Activating C-Bound Boron
Unlike pathway A, in pathway
B with C-bound boron activation, the
removal of N2 is assisted by B(C6F5)3 (blue lines, Figure ). In this process, the carbene intermediate IN1B is formed via the transition state TS1B-N (Gibbs free energy of 32.7 kcal/mol), and
then nucleophilic attack by styrene proceeds through the transition
state TS2B (Gibbs free energy of 8.8 kcal/mol) to produce
the ternary cyclic compound 3a. As this process has a
high energy barrier of 32.7 kcal/mol, it was also excluded.
Mechanism C of Activating O-Bound Boron
For O-bound
boron activation in the aryldiazodiacetate substrate,
we considered a mechanism involving styrene nucleophilic attack +
N2 removal (pathway C1, yellow lines, Figure ). The first step in pathway
C1 is similar to that in pathway A1. Substrate aryldiazodiacetate 1a reacts with the catalyst, B(C6F5)3, to form complex IN1C. Subsequently, styrene
nucleophilically attacks to form a five-membered cyclic intermediate IN2C via the transition state TS1C (Gibbs free
energy of 33.6 kcal/mol). As this intermediate is unstable, a N2 molecule is easily removed to form the ternary cyclic cyclopropane
product 3a. Because this process has a high energy barrier
(33.6 kcal/mol), it was also excluded. On the other hand, we also
considered an O-bound boron activation mechanism involving N2 removal + styrene nucleophilic attack (pathway C2, black and purple
lines, Figure ). Initially,
aryldiazodiacetate 1a and the catalyst, B(C6F5)3, form intermediate -IN1C. Thereafter, a N2 molecule
leaves via the transition state -TS3C (Gibbs free energy of 24.5 kcal/mol) to form a carbene
intermediate, -IN3C, which
cyclizes with styrene to form the ternary cyclic product 3a (purple lines, Figure ). Aryldiazodiacetate 1a and the catalyst can also form
intermediate -IN1C, which
is relatively stable with a free energy of 0.3 kcal/mol. Subsequently,
a molecule of N2 leaves via the transition state -TS3C (Gibbs free energy of 22.1
kcal/mol) to form -IN3C, a more stable carbene intermediate with a free energy of 0.2 kcal
(black lines, Figure ). The “Z” and “E” refer to the stereochemistry
of the oxygen coordination to boron. The energy of the black pathway
is 2.4 kcal/mol lower than that of the purple pathway (22.1 kcal/mol
vs 24.5 kcal/mol). Moreover, this black reaction pathway has the smallest
energy barrier at present.
Figure 2
O-bound boron activation mechanisms for the
aryldiazodiacetate
substrate (pathway C). Free energies (kcal/mol) are relative to 1a.
O-bound boron activation mechanisms for the
aryldiazodiacetate
substrate (pathway C). Free energies (kcal/mol) are relative to 1a.
Mechanism
D of Catalyst Activation without
B(C6F5)3
We also calculated
the diastereoselective cyclopropanation reaction mechanism of aryldiazodiacetate 1a and styrene 2a without B(C6F5)3 catalysis, as shown in Figure . The reaction mechanisms without B(C6F5)3 catalysis, whether N2 removal or the styrene nucleophilic attack transition state, have
a higher Gibbs free energy, which are 28.3, 28.8, and 41.7 kcal/mol,
respectively. Therefore, the reaction mechanism without B(C6F5)3 as a catalyst is not feasible.
Figure 3
Mechanism D
of catalyst activation without B(C6F5)3. Free energies (kcal/mol) are relative to 1a.
Mechanism D
of catalyst activation without B(C6F5)3. Free energies (kcal/mol) are relative to 1a.
Analysis and Comparison
of Key Transition
States for the Four Mechanisms
The key transition state for
each mechanism was analyzed to further clarify the reaction mechanism.
Compared with pathways A and B with B(C6F5)3-catalyzed N- and C-bound boron activation and pathway D without
B(C6F5)3 catalysis, pathway C with
B(C6F5)3-catalyzed O-bound boron
activation has a lower reaction energy barrier of 22.1 kcal/mol (Figure ). There are two
types of mechanisms, the styrene nucleophilic attack occurring after
N2 removal. N2 removal is the rate-limiting
step and this step determines the preference of a given mechanism.
In previous studies,[17] it has been suggested
that the interaction of boron yields a carbene form that facilitates
N2 removal, and our calculation results also support this
hypothesis. In addition, under B(C6F5)3 activation, the carbonyl O atom is more likely to provide an unshared
electron pair and π–π stacking is possible between
the two benzene rings in the transition state -TS3C. These factors would reduce the Gibbs
free energy of the reaction, resulting in easier N2 removal
and the formation of a more stable carbene intermediate. In contrast,
for N and C atoms activated by B(C6F5)3, as there are fewer outer electrons, it is difficult to obtain a
lone electron pair. Furthermore, steric hindrance in the transition
state makes N2 removal difficult and increases the Gibbs
free energy of the reaction.
Figure 4
Comparison of key transition states for the
four mechanisms. Free
energies (kcal/mol) are relative to 1a.
Comparison of key transition states for the
four mechanisms. Free
energies (kcal/mol) are relative to 1a.
Origin of Diastereoselectivity
The
origin of diastereoselectivity can be explained by the transition
state of the most favorable mechanism. As shown in Figure , the π–π
stacking interaction in -TS4C is obviously stronger than that in -TS4C-iso (the distance between the two benzene ring
centers is 3.51 Å vs 3.85 Å, and the included angle between
the benzene ring planes is 40.1° vs 54.6°). In addition,
In -TS4C-iso, there is
steric hindrance between the styrene aryl group and the large B(C6F5)3 catalyst. Furthermore, the analysis
and comparison of LUMO frontier orbits of the two transition states
can also prove this point of view. To rationalize the nonpair selectivity,
we also compared -TS4C and -TS4C-iso with an
energy difference of 3.9 kcal/mol (7.2 kcal/mol vs 11.1 kcal/mol).
This energy difference is consistent with the observed diastereoselectivity.[17] As shown in Figure , we also the adopted distortion/interaction
analysis. The distortion energies of -TS4C and -TS4C-iso are 2.6 and 4.6 kcal/mol, respectively. The calculated interaction
energies of -TS4C and -TS4C-iso are −10.7 and
−13.6 kcal/mol, respectively. It is pointed out that diastereoselectivity
is the main cause of interaction and distortion energy. To stimulate
the effect of interaction energy, -TS4C and -TS4C-iso were also analyzed by noncovalent interactions. Therefore, for -TS4C, two strong π–π
contacts, namely, the interaction between the aryl group of the diazo
compound and the huge tri(pentafluorophenyl) group of B(C6F5)3 or the styrene aryl group, are the main
factors determining the noncovalent interaction with different diastereoselective
transition states. The noncovalent interactions of -TS4C-iso only involve the π–π-superposition
between aryl functional groups of diazo compounds and styrene aryl
groups. This difference in noncovalent interactions may be the reason
for the final diastereoselectivity.
Figure 5
Key geometric parameters (in Å) and
free energies (kcal/mol)
are relative to 1a.
Figure 6
Distortion/interaction
analysis and noncovalent interaction analysis
for the [2+1] cycloaddition reaction. ΔE‡ is the activation energy, ΔEstrain is the distortion energy, and ΔEint is the interaction energy. The free energies are given
in kcal/mol.
Key geometric parameters (in Å) and
free energies (kcal/mol)
are relative to 1a.Distortion/interaction
analysis and noncovalent interaction analysis
for the [2+1] cycloaddition reaction. ΔE‡ is the activation energy, ΔEstrain is the distortion energy, and ΔEint is the interaction energy. The free energies are given
in kcal/mol.
Substitution
Effect of Diazoester and Styrene
Cyclopropyl on Aromatic Rings
As shown in Figure , we demonstrated the substitution
effect present at the aryl ring of both diazoester and styrene toward
cyclopropanation. Experimental results showed that diazocarbonyl and
styrene substrates without aryl substituents were ineffective, and
the yield was less than 5%.[17] According
to the calculation results, it is suggested that the cleavage of the
C–N bond and the removal of N2 are
the key steps to determine the reaction rate. The strong p−π
conjugation (carbene C and aryl substituent) can promote the formation
of carbene because it stabilizes the key transition state and reduces
the free activation energy. In contrast, diazo substrates Re1, Re2,
and Re3 may affect the calculation results of carbene formation and
combination due to the lack of the aryl substituent. The activation
energies of C–N bond cleavage and N2 removal of substrates Re1, Re2, and Re3 are 35.2, 34.0, and 42.0
kcal/mol, respectively, indicating that they have high activation
barriers, which makes it extremely difficult for C–N bond cleavage and N2 removal in the reaction process,
which may be the main factor for a low product yield when Re1, Re2,
and Re3 are used as substrates. This also indicates the substitution
effect present at the aryl ring of diazoester toward cyclopropanation.
Furthermore, Ariafard[25] pointed out that
the stronger π-donor the para substituent of the aryl ring,
the more efficient the B(C6F5)3 catalyst.
Figure 7
Energy
profile calculated for the reactions with ethyl diazoacetate
(Re1), ethyl diazocyanoacetate (Re2), or dimethyl diazomalonate (Re3).
The free energies are given in kcal/mol.
Energy
profile calculated for the reactions with ethyl diazoacetate
(Re1), ethyl diazocyanoacetate (Re2), or dimethyl diazomalonate (Re3).
The free energies are given in kcal/mol.
Conclusions
In summary, we performed DFT
calculations to clarify the catalytic
mechanism and the origin of diastereoselectivity in the cyclopropanation
of aryldiazodiacetate and styrene derivatives catalyzed by B(C6F5)3. Four possible reaction mechanisms
were considered, namely, N-, C-, and O-bound boron activated by B(C6F5)3 and without B(C6F5)3. By comparing the calculated energy barriers
for the different reaction mechanisms, the most plausible reaction
mechanism was identified. In this pathway, B(C6F5)3 catalyzed O-bound boron to activate aryldiazodiacetate,
followed by the removal of a N2 molecule, and finally the
styrene nucleophilic attack produced [2+1] cyclopropane products.
N2 removal is the rate-limiting step and this step determines
the preference of a given mechanism. The calculated results are in
agreement with experimental observations.[17] This mechanism was also used to explain the origin of the observed
diastereoselectivity. Steric hindrance between the styrene aryl group
and the large catalyst, B(C6F5)3,
as well as a favorable π–π stacking interaction
between the benzene rings resulted in high diastereoselectivity and
lowered the energy of the transition state (TS) in the corresponding
reaction mechanism. The calculated results not only provide a more
detailed explanation of the mechanism for the experimental study but
also have certain references and guiding significance for other catalytic
cyclopropanation reactions.