Literature DB >> 35471903

The endoplasmic reticulum adopts two distinct tubule forms.

Bowen Wang1,2,3, Zhiheng Zhao1,2,3, Michael Xiong1,2,3, Rui Yan1,2,3, Ke Xu1,2,3.   

Abstract

The endoplasmic reticulum (ER) is a versatile organelle with diverse functions. Through superresolution microscopy, we show that the peripheral ER in the mammalian cell adopts two distinct forms of tubules. Whereas an ultrathin form, R1, is consistently covered by ER-membrane curvature-promoting proteins, for example, Rtn4 in the native cell, in the second form, R2, Rtn4 and analogs are arranged into two parallel lines at a conserved separation of ∼105 nm over long ranges. The two tubule forms together account for ∼90% of the total tubule length in the cell, with either one being dominant in different cell types. The R1–R2 dichotomy and the final tubule geometry are both coregulated by Rtn4 (and analogs) and the ER sheet–maintaining protein Climp63, which, respectively, define the edge curvature and lumen height of the R2 tubules to generate a ribbon-like structure of well-defined width. Accordingly, the R2 tubule width correlates positively with the Climp63 intraluminal size. The R1 and R2 tubules undergo active remodeling at the second/subsecond timescales as they differently accommodate proteins, with the former effectively excluding ER-luminal proteins and ER-membrane proteins with large intraluminal domains. We thus uncover a dynamic structural dichotomy for ER tubules with intriguing functional implications.

Entities:  

Keywords:  ER tubules; ER-shaping proteins; endoplasmic reticulum; organelle morphology; superresolution microscopy

Mesh:

Year:  2022        PMID: 35471903      PMCID: PMC9170160          DOI: 10.1073/pnas.2117559119

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   12.779


  41 in total

1.  Membrane proteins of the endoplasmic reticulum induce high-curvature tubules.

Authors:  Junjie Hu; Yoko Shibata; Christiane Voss; Tom Shemesh; Zongli Li; Margaret Coughlin; Michael M Kozlov; Tom A Rapoport; William A Prinz
Journal:  Science       Date:  2008-02-29       Impact factor: 47.728

2.  Actin, spectrin, and associated proteins form a periodic cytoskeletal structure in axons.

Authors:  Ke Xu; Guisheng Zhong; Xiaowei Zhuang
Journal:  Science       Date:  2012-12-13       Impact factor: 47.728

3.  Reticulon short hairpin transmembrane domains are used to shape ER tubules.

Authors:  Nesia Zurek; Lenore Sparks; Gia Voeltz
Journal:  Traffic       Date:  2010-11-12       Impact factor: 6.215

Review 4.  How many lives does CLIMP-63 have?

Authors:  Patrick A Sandoz; F Gisou van der Goot
Journal:  Biochem Soc Trans       Date:  2015-04       Impact factor: 5.407

Review 5.  Mechanisms shaping the membranes of cellular organelles.

Authors:  Yoko Shibata; Junjie Hu; Michael M Kozlov; Tom A Rapoport
Journal:  Annu Rev Cell Dev Biol       Date:  2009       Impact factor: 13.827

Review 6.  Visualizing and discovering cellular structures with super-resolution microscopy.

Authors:  Yaron M Sigal; Ruobo Zhou; Xiaowei Zhuang
Journal:  Science       Date:  2018-08-30       Impact factor: 47.728

7.  The quantitative proteome of a human cell line.

Authors:  Martin Beck; Alexander Schmidt; Johan Malmstroem; Manfred Claassen; Alessandro Ori; Anna Szymborska; Franz Herzog; Oliver Rinner; Jan Ellenberg; Ruedi Aebersold
Journal:  Mol Syst Biol       Date:  2011-11-08       Impact factor: 11.429

8.  Cooperation of the ER-shaping proteins atlastin, lunapark, and reticulons to generate a tubular membrane network.

Authors:  Songyu Wang; Hanna Tukachinsky; Fabian B Romano; Tom A Rapoport
Journal:  Elife       Date:  2016-09-13       Impact factor: 8.140

9.  Two-colour live-cell nanoscale imaging of intracellular targets.

Authors:  Francesca Bottanelli; Emil B Kromann; Edward S Allgeyer; Roman S Erdmann; Stephanie Wood Baguley; George Sirinakis; Alanna Schepartz; David Baddeley; Derek K Toomre; James E Rothman; Joerg Bewersdorf
Journal:  Nat Commun       Date:  2016-03-04       Impact factor: 14.919

10.  Translocation of interleukin-1β into a vesicle intermediate in autophagy-mediated secretion.

Authors:  Min Zhang; Samuel J Kenny; Liang Ge; Ke Xu; Randy Schekman
Journal:  Elife       Date:  2015-11-02       Impact factor: 8.140

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