Literature DB >> 35471019

Beyond Triphosphates: Reagents and Methods for Chemical Oligophosphorylation.

Scott M Shepard1, Henning J Jessen2, Christopher C Cummins1.   

Abstract

Oligophosphates play essential roles in biochemistry, and considerable research has been directed toward the synthesis of both naturally occurring oligophosphates and their synthetic analogues. Greater attention has been given to mono-, di-, and triphosphates, as these are present in higher concentrations biologically and easier to synthesize. However, extended oligophosphates have potent biochemical roles, ranging from blood coagulation to HIV drug resistance. Sporadic reports have slowly built a niche body of literature related to the synthesis and study of extended oligophosphates, but newfound interests and developments have the potential to rapidly expand this field. Here we report on current methods to synthesize oligophosphates longer than triphosphates and comment on the most important future directions for this area of research. The state of the art has provided fairly robust methods for synthesizing nucleoside 5'-tetra- and pentaphosphates as well as dinucleoside 5',5'-oligophosphates. Future research should endeavor to push such syntheses to longer oligophosphates while developing synthetic methodologies for rarer morphologies such as 3'-nucleoside oligophosphates, polyphosphates, and phosphonate/thiophosphate analogues of these species.

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Year:  2022        PMID: 35471019      PMCID: PMC9307064          DOI: 10.1021/jacs.1c07990

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   16.383


  119 in total

1.  Identification and characterization of adenosine 5'-tetraphosphate in human myocardial tissue.

Authors:  Timm Westhoff; Joachim Jankowski; Sven Schmidt; Jiankai Luo; Günter Giebing; Hartmut Schlüter; Martin Tepel; Walter Zidek; Markus van der Giet
Journal:  J Biol Chem       Date:  2003-02-27       Impact factor: 5.157

2.  Methods and protocols of modern solid phase Peptide synthesis.

Authors:  Muriel Amblard; Jean-Alain Fehrentz; Jean Martinez; Gilles Subra
Journal:  Mol Biotechnol       Date:  2006-07       Impact factor: 2.695

3.  Chemical synthesis of deoxyoligonucleotides by the phosphoramidite method.

Authors:  M H Caruthers; A D Barone; S L Beaucage; D R Dodds; E F Fisher; L J McBride; M Matteucci; Z Stabinsky; J Y Tang
Journal:  Methods Enzymol       Date:  1987       Impact factor: 1.600

4.  Role of magnesium and other divalent cations in ATP-utilizing enzymes.

Authors:  A S Mildvan
Journal:  Magnesium       Date:  1987

5.  Inorganic polyphosphate controls cyclophilin B-mediated collagen folding in osteoblast-like cells.

Authors:  Mei Li Khong; Lina Li; Maria E Solesio; Evgeny V Pavlov; Julian A Tanner
Journal:  FEBS J       Date:  2020-03-05       Impact factor: 5.542

6.  P1,P2-diimidazolyl derivatives of pyrophosphate and bis-phosphonates--synthesis, properties, and use in preparation of dinucleoside tetraphosphates and analogs.

Authors:  Ivan B Yanachkov; Edward J Dix; Milka I Yanachkova; George E Wright
Journal:  Org Biomol Chem       Date:  2010-11-17       Impact factor: 3.876

7.  Preparation of synthetically challenging nucleotides using cyanoethyl P-imidazolides and microwaves.

Authors:  Malwina Strenkowska; Przemyslaw Wanat; Marcin Ziemniak; Jacek Jemielity; Joanna Kowalska
Journal:  Org Lett       Date:  2012-09-11       Impact factor: 6.005

8.  Hydrophilic interaction chromatography of nucleotides and their pathway intermediates on titania.

Authors:  Ting Zhou; Charles A Lucy
Journal:  J Chromatogr A       Date:  2008-02-13       Impact factor: 4.759

9.  Protein polyphosphorylation of lysine residues by inorganic polyphosphate.

Authors:  Cristina Azevedo; Thomas Livermore; Adolfo Saiardi
Journal:  Mol Cell       Date:  2015-03-12       Impact factor: 17.970

10.  Development of a yeast model to study the contribution of vacuolar polyphosphate metabolism to lysine polyphosphorylation.

Authors:  Cristina Azevedo; Yann Desfougères; Yannasittha Jiramongkol; Hamish Partington; Sasanan Trakansuebkul; Jyoti Singh; Nicole Steck; Henning J Jessen; Adolfo Saiardi
Journal:  J Biol Chem       Date:  2019-12-16       Impact factor: 5.157

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