Literature DB >> 35467284

Direct Detection of Extracellular Vesicle miRNAs Using a Single-Step RT-qPCR Assay.

Ayyanar Sivanantham1, Heedoo Lee2, Yang Jin3.   

Abstract

Extracellular vesicles (EVs) are biological carriers, and EV-associated miRNAs (EV-miRNAs) are considered as a novel biomarker in multiple diseases. Currently, the column-based purification method is used to purify miRNAs from EVs. However, this method of purification is complex, time-consuming, and expensive. Therefore, a simple and cost-effective single-step quantitative reverse transcription-polymerase chain reaction (RT-qPCR) method is required to detect the expression of EV-miRNAs. This chapter describes a protocol for directly analyzing the EV-miRNAs expression from mouse bronchoalveolar lavage fluid (BALF) and serum without going for an RNA isolation and purification step from EVs. It is an efficient method in several terms such as cost-wise, time, low expertise, and accuracy in results. This method may be helpful in diagnostic blood tests used in medical centers or research laboratories.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Bronchoalveolar lavage fluid (BALF); Cost-effective method; EV-miRNAs; Extracellular vesicles (EVs); Serum; Single-step RT-qPCR

Mesh:

Substances:

Year:  2022        PMID: 35467284     DOI: 10.1007/978-1-0716-2341-1_10

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  13 in total

1.  Biological properties of extracellular vesicles and their physiological functions.

Authors:  María Yáñez-Mó; Pia R-M Siljander; Zoraida Andreu; Apolonija Bedina Zavec; Francesc E Borràs; Edit I Buzas; Krisztina Buzas; Enriqueta Casal; Francesco Cappello; Joana Carvalho; Eva Colás; Anabela Cordeiro-da Silva; Stefano Fais; Juan M Falcon-Perez; Irene M Ghobrial; Bernd Giebel; Mario Gimona; Michael Graner; Ihsan Gursel; Mayda Gursel; Niels H H Heegaard; An Hendrix; Peter Kierulf; Katsutoshi Kokubun; Maja Kosanovic; Veronika Kralj-Iglic; Eva-Maria Krämer-Albers; Saara Laitinen; Cecilia Lässer; Thomas Lener; Erzsébet Ligeti; Aija Linē; Georg Lipps; Alicia Llorente; Jan Lötvall; Mateja Manček-Keber; Antonio Marcilla; Maria Mittelbrunn; Irina Nazarenko; Esther N M Nolte-'t Hoen; Tuula A Nyman; Lorraine O'Driscoll; Mireia Olivan; Carla Oliveira; Éva Pállinger; Hernando A Del Portillo; Jaume Reventós; Marina Rigau; Eva Rohde; Marei Sammar; Francisco Sánchez-Madrid; N Santarém; Katharina Schallmoser; Marie Stampe Ostenfeld; Willem Stoorvogel; Roman Stukelj; Susanne G Van der Grein; M Helena Vasconcelos; Marca H M Wauben; Olivier De Wever
Journal:  J Extracell Vesicles       Date:  2015-05-14

2.  Exosome-Mediated Small RNA Delivery: A Novel Therapeutic Approach for Inflammatory Lung Responses.

Authors:  Duo Zhang; Heedoo Lee; Xiaoyun Wang; Ashish Rai; Michael Groot; Yang Jin
Journal:  Mol Ther       Date:  2018-07-10       Impact factor: 11.454

Review 3.  Extracellular Vesicles: Unique Intercellular Delivery Vehicles.

Authors:  Sybren L N Maas; Xandra O Breakefield; Alissa M Weaver
Journal:  Trends Cell Biol       Date:  2016-12-13       Impact factor: 20.808

Review 4.  Communication by Extracellular Vesicles: Where We Are and Where We Need to Go.

Authors:  Mercedes Tkach; Clotilde Théry
Journal:  Cell       Date:  2016-03-10       Impact factor: 41.582

Review 5.  Exosomes as new players in metabolic organ cross-talk.

Authors:  Claudiane Guay; Romano Regazzi
Journal:  Diabetes Obes Metab       Date:  2017-09       Impact factor: 6.577

6.  Identification of miRNA-rich vesicles in bronchoalveolar lavage fluid: Insights into the function and heterogeneity of extracellular vesicles.

Authors:  Heedoo Lee; Michael Groot; Mayra Pinilla-Vera; Laura E Fredenburgh; Yang Jin
Journal:  J Control Release       Date:  2018-12-07       Impact factor: 9.776

Review 7.  Diagnostic Potential of Extracellular MicroRNA in Respiratory Diseases.

Authors:  Dhamotharan Pattarayan; Rajesh K Thimmulappa; Vilwanathan Ravikumar; Subbiah Rajasekaran
Journal:  Clin Rev Allergy Immunol       Date:  2018-06       Impact factor: 8.667

8.  Functional Evidence of Pulmonary Extracellular Vesicles in Infectious and Noninfectious Lung Inflammation.

Authors:  Heedoo Lee; Duo Zhang; Debra L Laskin; Yang Jin
Journal:  J Immunol       Date:  2018-07-11       Impact factor: 5.422

9.  Caveolin-1 selectively regulates microRNA sorting into microvesicles after noxious stimuli.

Authors:  Heedoo Lee; Chunhua Li; Yang Zhang; Duo Zhang; Leo E Otterbein; Yang Jin
Journal:  J Exp Med       Date:  2019-06-24       Impact factor: 14.307

Review 10.  Circulating microRNAs as potential cancer biomarkers: the advantage and disadvantage.

Authors:  Hao Wang; Ran Peng; Junjie Wang; Zelian Qin; Lixiang Xue
Journal:  Clin Epigenetics       Date:  2018-04-23       Impact factor: 6.551

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