Literature DB >> 35467283

Isolation and Characterization of Urinary Extracellular Vesicles for MicroRNA Biomarker Signature Development with Reference to MISEV Compliance.

Marlene Reithmair1, Anja Lindemann2, Veronika Mussack3, Michael W Pfaffl3.   

Abstract

Urine bears high potential for serving as biomarker repository for renal and urinary tract associated disorders. Besides various metabolites and salts, urine carries extracellular vesicles (EVs)-a heterogeneous group of cell-derived mediators comprising proteins, lipids, and nucleic acids such as microRNAs (miRNAs). Particularly, EV-derived miRNA biomarkers have already been identified for numerous disorders such as sepsis, various blood and solid cancer entities, respiratory and renal diseases. However, study results are often incomparable due to poorly reported EV separation and miRNA isolation protocols and emphasize the need for standardization and reproducibility. To ensure valid EV-derived miRNA biomarker findings from urine, a step-by-step protocol compliant with the "Minimal Information for Studies of Extracellular Vesicles" (MISEV) is outlined in the following paragraphs. Actually, an immunoaffinity-based EV separation method followed by EV characterization, quantification, and normalization, as well as consecutive miRNA isolation and miRNA profiling by small RNA sequencing, are described.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Biomarker; EV; MISEV; NGS; Small RNA sequencing; Urinary extracellular vesicles; microRNA

Mesh:

Substances:

Year:  2022        PMID: 35467283     DOI: 10.1007/978-1-0716-2341-1_9

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  47 in total

Review 1.  Diagnostic and prognostic potential of extracellular vesicles in peripheral blood.

Authors:  Anne Louise Schacht Revenfeld; Rikke Bæk; Morten Hjuler Nielsen; Allan Stensballe; Kim Varming; Malene Jørgensen
Journal:  Clin Ther       Date:  2014-06-01       Impact factor: 3.393

Review 2.  Extracellular vesicles: masters of intercellular communication and potential clinical interventions.

Authors:  Jonathan M Pitt; Guido Kroemer; Laurence Zitvogel
Journal:  J Clin Invest       Date:  2016-04-01       Impact factor: 14.808

3.  The nature and significance of platelet products in human plasma.

Authors:  P Wolf
Journal:  Br J Haematol       Date:  1967-05       Impact factor: 6.998

4.  Nucleic acids within urinary exosomes/microvesicles are potential biomarkers for renal disease.

Authors:  Kevin C Miranda; Daniel T Bond; Mary McKee; Johan Skog; Teodor G Păunescu; Nicolas Da Silva; Dennis Brown; Leileata M Russo
Journal:  Kidney Int       Date:  2010-04-28       Impact factor: 10.612

5.  Propofol and Sevoflurane Differentially Impact MicroRNAs in Circulating Extracellular Vesicles during Colorectal Cancer Resection: A Pilot Study.

Authors:  Dominik Buschmann; Florian Brandes; Anja Lindemann; Melanie Maerte; Petra Ganschow; Alexander Chouker; Gustav Schelling; Michael W Pfaffl; Marlene Reithmair
Journal:  Anesthesiology       Date:  2020-01       Impact factor: 7.892

6.  Cellular and extracellular miRNAs are blood-compartment-specific diagnostic targets in sepsis.

Authors:  Marlene Reithmair; Dominik Buschmann; Melanie Märte; Benedikt Kirchner; Daniel Hagl; Ines Kaufmann; Martina Pfob; Alexander Chouker; Ortrud K Steinlein; Michael W Pfaffl; Gustav Schelling
Journal:  J Cell Mol Med       Date:  2017-04-06       Impact factor: 5.310

7.  Proteomic profiling of extracellular vesicles reveals additional diagnostic biomarkers for myocardial infarction compared to plasma alone.

Authors:  Olof Gidlöf; Mikael Evander; Melinda Rezeli; György Marko-Varga; Thomas Laurell; David Erlinge
Journal:  Sci Rep       Date:  2019-06-20       Impact factor: 4.379

8.  The biology of extracellular vesicles: The known unknowns.

Authors:  Leonid Margolis; Yoel Sadovsky
Journal:  PLoS Biol       Date:  2019-07-18       Impact factor: 8.029

Review 9.  Extracellular vesicles as potential biomarkers and therapeutic approaches in autoimmune diseases.

Authors:  Kaiyuan Xu; Qin Liu; Kaihui Wu; Liu Liu; Maomao Zhao; Hui Yang; Xiang Wang; Wenmei Wang
Journal:  J Transl Med       Date:  2020-11-12       Impact factor: 5.531

Review 10.  Extracellular Vesicles as Biomarkers in Cardiovascular Disease; Chances and Risks.

Authors:  Annemiek Dickhout; Rory R Koenen
Journal:  Front Cardiovasc Med       Date:  2018-08-22
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