| Literature DB >> 35466195 |
Jessica R C Priestley1, Laura A Adang2, Sarah Drewes Williams3, Uta Lichter-Konecki3, Caitlin Menello1, Nicole M Engelhardt1, James C DiPerna4, Brenda DiBoscio1, Rebecca C Ahrens-Nicklas1,5, Andrew C Edmondson1,5, Francis Jeshira Reynoso Santos1,5, Can Ficicioglu1,5.
Abstract
X-linked adrenoleukodystrophy (X-ALD) is the most common peroxisomal disorder. It results from pathogenic variants in ABCD1, which encodes the peroxisomal very-long-chain fatty acid transporter, causing a spectrum of neurodegenerative phenotypes. The childhood cerebral form of the disease is particularly devastating. Early diagnosis and intervention improve outcomes. Because newborn screening facilitates identification of at-risk individuals during their asymptomatic period, X-ALD was added to the Pennsylvania newborn screening program in 2017. We analyzed outcomes from the first four years of X-ALD newborn screening, which employed a two-tier approach and reflexive ABCD1 sequencing. There were 51 positive screens with elevated C26:0-lysophosphatidylcholine on second-tier screening. ABCD1 sequencing identified 21 hemizygous males and 24 heterozygous females, and clinical follow up identified four patients with peroxisomal biogenesis disorders. There were two false-positive cases and one false-negative case. Three unscreened individuals, two of whom were symptomatic, were diagnosed following their young siblings' newborn screening results. Combined with experiences from six other states, this suggests a U.S. incidence of roughly 1 in 10,500, higher than had been previously reported. Many of these infants lack a known family history of X-ALD. Together, these data highlight both the achievements and challenges of newborn screening for X-ALD.Entities:
Keywords: ABCD1; C26:0; X-ALD; X-linked adrenoleukodystrophy; newborn screening
Year: 2022 PMID: 35466195 PMCID: PMC9036281 DOI: 10.3390/ijns8020024
Source DB: PubMed Journal: Int J Neonatal Screen ISSN: 2409-515X
Figure 1The Pennsylvania X-ALD newborn screening algorithm utilizes a tiered approach. C26:0-LPC is measured first with flow injection analysis tandem mass spectrometry (FIA-MS/MS), then with liquid chromatography tandem mass spectrometry (LC-MS/MS). Repeat dried blood spot samples were requested for newborns with concerning second-tier screens. Sequencing of the ABCD1 gene was performed for repeat specimens with C26:0-LPC exceeding the cutoff value.
Figure 2A visual summary of Pennsylvania X-ALD newborn screening results between 1 April 2017 and 26 May 2021. LPC = lysophosphatidylcholine; X-ALD = X-linked adrenoleukodystrophy; VUS = variant of uncertain significance.
Newborn screen, biochemical, and molecular features of 44 Pennsylvanian infants who screened positive for X-ALD between 1 April 2017 and 26 May 2021 and harbored ABCD1 variants. Screening was considered positive for second-tier LC-MS/MS quantitation of C26:0-LPC > 0.15 µmol/L on initial and repeat dried blood spot specimens. First-tier results from FIA-MS/MS are not shown. Confirmatory biochemical testing with C26:0 quantitation was performed on a clinical basis (reference range: 0.17–0.73 µmol/L). “-” denotes that the clinical information was unavailable. All units are in µmol/L. ABCD1 variants and their laboratory interpretation using ACMG criteria are listed. Variants identified in the ALD Variant Database are indicated as previously reported. Inheritance pattern is provided for families in whom parental testing was performed and available. Finally, known family history is denoted for patients in whom there were family members with confirmed, symptomatic X-ALD phenotype. “*” indicates individuals with family members identified via NBS who are known to carry the same variant but are asymptomatic. “^” indicates family individuals whose medical histories were suspicious for symptomatic individuals but for whom an X-ALD diagnosis had not been made (for example: an adult male uncle with progressive gait disturbance).
| # | Sex | NBS C26:0-LPC | VLCFA C26:0 | Classification | Previously Reported? | Inheritance | Family History | |||
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | Female | 0.32 | 0.52 | 3.40 | c.887A>C | p.Tyr296Ser | Likely pathogenic | Yes | Maternal | No |
| 2 | Female | 0.38 | 0.3 | 2.12 | c.1166G>A | p.Arg389His | Pathogenic | Yes | Paternal | No |
| 3 | Female | 0.31 | 0.23 | 1.03 | c.1415_1416delAG | p.Gln472Profs*84 | Pathogenic | Yes | Maternal | Yes |
| 4 | Female | 0.62 | 0.32 | - | c.1447dupA | - | Pathogenic | No | - | - |
| 5 | Female | 0.29 | 0.34 | 1.97 | c.1516dupA | - | Pathogenic | No | De novo | No |
| 6 | Female | 0.43 | 0.26 | - | c.1628del | p.Pro543Argfs*15 | Pathogenic | Yes | - | No |
| 7 | Female | 0.31 | 0.28 | 2.34 | c.1690delG | - | Pathogenic | No | De novo | No |
| 8 | Female | 0.73 | 0.47 | 2.67 | c.1978C>T | p.Arg660Trp | Pathogenic | Yes | Maternal | No ^ |
| 9 | Female | 0.54 | 0.4 | 1.84 | c.2135G>A | p.Arg712His | Pathogenic | Yes | Paternal or De novo | No |
| 10 | Female | 0.81 | 0.39 | - | c.264C>A | p.Cys88* | Pathogenic | Yes | De novo | No |
| 11 | Female | 0.58 | 0.37 | 0.93 | c.346G>A | p.Gly116Arg | Pathogenic | Yes | Maternal | Yes |
| 12 | Female | 0.39 | 0.35 | 2.52 | c.390dupT | - | Pathogenic | No | Paternal or De novo | No |
| 13 | Female | 0.51 | 0.29 | 2.50 | c.521A>G | p.Tyr174Cys | Pathogenic | Yes | - | No |
| 14 | Female | 0.4 | 0.29 | 2.22 | c.838C>T | p.Arg280Cys | Pathogenic | Yes | - | No |
| 15 | Female | 0.63 | 0.36 | - | c.978G>A | p.Trp326* | Pathogenic | No | - | - |
| 16 | Female | 0.48 | 0.37 | 3.48 | Deletion of exons 3 and 4 | - | Pathogenic | No | - | No |
| 17 | Female | 0.49 | 0.26 | 2.99 | c.1533C>G | p.Cys511Trp | VUS | Yes | Maternal | No ^ |
| 18 | Female | 0.55 | 0.22 | 1.39 | c.262T>C | p.Cys88Arg | VUS | No | Maternal | No |
| 19 | Female | 0.33 | 0.34 | 1.79 | c.467G>A | p.Gly156Asp | VUS | No | Maternal | No |
| 20 | Female | 0.28 | 0.28 | 1.46 | c.700C>T | p.Arg234Cys | VUS | Yes | Maternal | No ^ |
| 21 | Female | 0.24 | 0.17 | - | c.739G>A | p.Ala247Thr | VUS | Yes | Maternal | No * |
| 22 | Female | 0.24 | 0.21 | 2.14 | c.880G>A | p.Ala294Thr | VUS | Yes | Maternal | No |
| 23 | Female | 0.23 | 0.19 | 0.76 | c.970C>T | p.Arg324Cys | VUS | Yes | Maternal | No ^ |
| 24 | Male | 0.7 | 0.2 | 2.32 | c.565C>T | p.Arg189Trp | Likely pathogenic | Yes | Maternal | Yes |
| 25 | Male | 0.52 | 0.56 | - | c.1390C>T | p.Arg464* | Pathogenic | Yes | Maternal | Yes |
| 26 | Male | 0.84 | 0.9 | - | c.1415_1416delAG | p.Gln472Profs*84 | Pathogenic | Yes | Maternal | No |
| 27 | Male | 1.08 | 0.52 | 2.90 | c.1661G>A | p.Arg554His | Pathogenic | Yes | Maternal | Yes |
| 28 | Male | 0.62 | 0.36 | - | c.1772G>A | p.Arg591Gln | Pathogenic | Yes | Maternal | No * |
| 29 | Male | 0.62 | 0.33 | - | c.1772G>A | p.Arg591Gln | Pathogenic | Yes | Maternal | No * |
| 30 | Male | 0.76 | 0.61 | 4.06 | c.796G>A | p.Gly266Arg | Pathogenic | Yes | Maternal | No |
| 31 | Male | 0.28 | 0.2 | 1.51 | c.1184C>T | p.Ala395Val | VUS | No | Maternal | No * |
| 32 | Male | 0.35 | 0.29 | 2.50 | c.1253G>A | p.Arg418Gln | VUS | Yes | Maternal | No ^ |
| 33 | Male | 0.55 | 0.3 | 3.13 | c.1448C>T | p.Thr483Met | VUS | No | Maternal | No ^ |
| 34 | Male | 0.64 | 0.75 | - | c.1832A>G | p.Gln611Arg | VUS | Yes | - | - |
| 35 | Male | 0.48 | 0.2 | - | c.229_237delTGGCTCCTG | p.Trp77_Leu79del | VUS | Yes | - | - |
| 36 | Male | 0.37 | 0.25 | 3.35 | c.229_237delTGGCTCCTG | p.Trp77_Leu79del | VUS | Yes | Maternal | No ^ |
| 37 | Male | 0.3 | 0.27 | 2.60 | c.452T>C | p.Ile151Thr | VUS | No | Maternal | Yes |
| 38 | Male | 0.67 | 0.33 | - | c.487C>T | p.Arg163Cys | VUS | No | - | - |
| 39 | Male | 0.82 | 0.39 | 2.67 | c.700C>T | p.Arg234Cys | VUS | Yes | Maternal | No * |
| 40 | Male | 0.69 | 0.3 | 3.18 | c.700C>T | p.Arg234Cys | VUS | Yes | Maternal | Yes |
| 41 | Male | 0.29 | 0.27 | - | c.739G>A | p.Ala247Thr | VUS | Yes | - | - |
| 42 | Male | 0.86 | 0.97 | 3.05 | c.824G>C | p.Arg275Pro | VUS | Yes | Maternal | No ^ |
| 43 | Male | 0.41 | 0.33 | 1.34 | c.851C>T | p.Ser284Leu | VUS | No | Maternal | No |
| 44 | Male | 0.31 | 0.27 | - | c.851C>T | p.Ser284Leu | VUS | Yes | Maternal | No * |
Newborn screen, biochemical, and molecular features of seven Pennsylvanian infants who screened positive for X-ALD between 1 April 2017 and 26 May 2021 and did not harbor ABCD1 variants. Newborn screening was considered positive for second-tier LC-MS/MS quantitation of C26:0-LPC > 0.15 µmol/L on initial and repeat dried blood spot specimens. First-tier results from FIA-MS/MS are not shown. Confirmatory biochemical testing with C26:0 quantitation was performed on a clinical basis (reference range: 0.17–0.73 µmol/L). “-” denotes that the clinical information was unavailable. All units are in µmol/L.
| # | Sex | NBS C26:0-LPC | VLCFA C26:0 | Screen Outcome | ||
|---|---|---|---|---|---|---|
| 1 | Female | 0.64 | 0.4 | 2.57 | none | Parent refusal |
| 2 | Female | 0.36 | 0.29 | 0.76 | none | False positive |
| 3 | Male | 0.33 | 0.19 | 0.90 | none | False positive |
| 4 | Female | 0.69 | 0.48 | 2.47 | none | Peroxisomal biogenesis defect |
| 5 | Male | 1.32 | 1.36 | 8.75 | none | Peroxisomal biogenesis defect |
| 6 | Male | 1.19 | 1.82 | 21.48 | none | Peroxisomal biogenesis defect |
| 7 | Unknown | 2.18 | 2.22 | - | none | Peroxisomal biogenesis defect |
Comparison of newborn screening strategies for X-ALD across seven U.S. states. All states employed a two-tier strategy for identifying infants requiring biochemical genetics referrals. Sequencing of the ABCD1 gene was performed either prior to the referral by the NBS laboratory as a “third-tier” screen or ordered clinically by the referral provider. FIA = flow injection analysis; LC = liquid chromatography; HPLC = high-performance liquid chromatography; MS/MS = tandem mass spectroscopy.
| State | Tier 1: Method/Target/Cutoff | Tier 2: Method/Target/Cutoff | |||
|---|---|---|---|---|---|
| California [ | FIA-MS/MS | C26 ≥ 0.42 µmol/L | LC-MS/MS | C26 ≥ 0.22 µmol/L a | Integrated with NBS |
| Georgia [ | FIA-MS/MS | CLIR analysis of C20, C22, C24, and C26 LPC | LC-MS/MS | C26:0-LPC > 0.30 nmol/mL | Following referral |
| Illinois [ | LC-MS/MS | Borderline: C26:0-LPC ≥ 0.18 µmol/L | LC-MS/MS | Borderline: C26:0-LPC ≥ 0.18 µmol/L | Following referral |
| New York [ | MS/MS | C26:0-LPC | HPLC-MS/MS | C26:0-LPC | Integrated with NBS |
| North Carolina [ | HPLC-MS/MS | C24:0-LPC ≥ 0.175 µmol/L and | Duplicate HPLC-MS/MS | Median C26:0-LPC ≥ 0.15 µmol/L OR | Integrated with NBS |
| Minnesota [ | LC-MS/MS | Borderline: C26:0-LPC ≥ 0.16 µmol/L | Repeat LC-MS/MS | C26:0-LPC ≥ 0.16 µmol/L | Following referral |
| Pennsylvania | FIA-MS/MS | C26:0-LPC > 0.36 µmol/L | LC-MS/MS | C26:0-LPC > 0.15 µmol/L | Integrated with NBS |
a California changed its second-tier cutoff value from ≥0.15 µmol/L to ≥0.22 µmol/L to improve test performance 22 months after NBS for X-ALD began [43].
Comparison of U.S. newborn screening outcomes for X-ALD across six publications plus the present study. Positive screens and how those were classified as various diagnoses or false-positive cases were defined by their respective authors.
| State | Publication | Study Length | Total # Screened | Positive Screens | Male X-ALD | Female | Peroxisome | Other Genetic Syndrome |
|---|---|---|---|---|---|---|---|---|
| California | Matteson et al., 2021 [ | 4 years | 1,854,631 | 355 | 95 | 110 | 23 | 12 |
| Georgia | Hall et al., 2020 [ | 7 months | 51,081 | 11 | 1 | 0 | 2 | 0 |
| Illinois | Burton et al., 2022 [ | 1 year 11 months | 276,000 | 34 a | 7 | 10 b | 3 | 0 |
| New York | Moser et al., 2016 [ | 2 years 8 months | 630,000 | 53 | 20 c | 22 | - d | - d |
| North Carolina | Lee et al., 2020 [ | 6 months | 52,301 | 12 | 3 | 3 | 1 | 1 |
| Minnesota | Wiens et al., 2019 [ | 1 year | 67,836 | 14 | 9 | 5 | 0 | 0 |
| Pennsylvania | Present Study | 4 years 2 months | 542,554 | 51 | 21 | 23 | 4 | 0 |
a Illinois also employs a system in which initial dried blood spot C26:0-LPC levels ≥0.28 µmol/L are considered positive and levels 0.18–0.28 µmol/L are considered borderline. Repeat dried blood spot specimens are requested for borderline cases and considered positive if C26:0-LPC levels are ≥0.28 µmol/L or borderline if C26:0-LPC levels are 0.18–0.28 µmol/L. Here, all positive screens are included, regardless of whether they were positive on the first or second dried blood spot specimen. b One female individual was found to be homozygous for her ABCD1 variant due to isodisomy X and is included in this number. c One male individual was found to be heterozygous for his ABCD1 variant due to 47,XXY and is included in this number. d Ten cases screened positive but did not harbor an identified ABCD1 variant. It was included whether any of these cases represented alternative diagnoses.