| Literature DB >> 35458600 |
Federico Wallace1, Carolina Fontana2, Fernando Ferreira1,3, Cristina Olivaro1.
Abstract
An immunoadjuvant preparation (named Fraction B) was obtained from the aqueous extract of Quillaja brasiliensis leaves, and further fractionated by consecutive separations with silica flash MPLC and reverse phase HPLC. Two compounds were isolated, and their structures elucidated using a combination of NMR spectroscopy and mass spectrometry. One of these compounds is a previously undescribed triterpene saponin (Qb1), which is an isomer of QS-21, the unique adjuvant saponin employed in human vaccines. The other compound is a triterpene saponin previously isolated from Quillaja saponaria bark, known as S13. The structure of Qb1 consists of a quillaic acid residue substituted with a β-d-Galp-(1→2)-[β-d-Xylp-(1→3)]-β-d-GlcpA trisaccharide at C3, and a β-d-Xylp-(1→4)-α-l-Rhap-(1→2)-[α-l-Arap-(1→3)]-β-d-Fucp moiety at C28. The oligosaccharide at C28 was further substituted at O4 of the fucosyl residue with an acyl group capped with a β-d-Xylp residue.Entities:
Keywords: NMR spectroscopy; QS-21 isomer; Quillaja brasiliensis; immunoadjuvant saponins; structural analysis
Mesh:
Substances:
Year: 2022 PMID: 35458600 PMCID: PMC9024837 DOI: 10.3390/molecules27082402
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.927
Figure 1Chemical structures of saponins Qb1 (top) and S13 (bottom) isolated from Fraction B of Quillaja brasiliensis. QS-21Xyl and QS-21Api (top) isolated from Quillaja saponaria.
Figure 2General structure of QS-21 and isomers (A). Negative mode MS2 spectra of Qb1 and QS-21Xyl (B,C, respectively) obtained from the precursor ion [M-H]− at m/z 1988.0 and 1988.1, respectively. The most relevant daughter ions are assigned in the generic structure shown in A. The X and X substituents correspond to pentose residues in both Qb1 and QS-21Xyl. Two additional pentose residues are substituting either the Rha or Fuc residues in both compounds, but their exact positions could not be determined solely by the MS2 data (note that in this case all the possible substitution positions are indicated as X–X).
Figure 3Selected regions of the multiplicity-edited 1H,13C-HSQC spectrum of Qb1 showing the ring and hydroxymethyl groups (A) and the anomeric region (B). In the first figure (A), the CH2 groups correlations appear in red.
1H and 13C NMR chemical shifts (ppm) of the two oligosaccharide chains from Qb1, and inter-residue correlations from 1H,1H-NOESY and 1H,13C-HMBC spectra. The spectra were recorded in CD3OD at 25 °C on a Bruker Avance 500 MHz spectrometer.
| Residue | Abbreviation | 1H/13C | Correlation to Atom | ||||||
|---|---|---|---|---|---|---|---|---|---|
| 1 | 2 | 3 | 4 | 5 | 6 | 1H,13C-HMBC | 1H,1H-NOESY | ||
|
| |||||||||
| →2,3)-β- | GlcA | 4.43 [8.6] | 3.65 | 3.67 | 3.49 | 3.65 | C3, | H3, | |
| 104.6 | ~78.3 | 86.7 | ~71.2 | ~78.3 | n.d. | H3, | |||
| β- | Gal | 4.80 [7.1] | 3.44 | 3.43 | 3.81 | 3.48 | 3.73, 3.76 | C2, | H2, |
| 103.8 | 73.6 | 75.4 | 70.9 | 76.7 | 62.2 | H2, | |||
| β- | Xyl(I) | 4.59 [7.7] | 3.23 | 3.30 | 3.49 | 3.18, 3.89 | C3, | H3, | |
| 104.9 | 75.3 | ~78.2 | ~71.2 | ~67.1 | H3, | ||||
|
| |||||||||
| →2,3,4)-β- | Fuc | 5.41 [8.1] | 3.89 | 4.00 | 5.29 | 3.85 | 1.08 | C28, | |
| 95.1 {164} | 75.1 | 81.9 | 74.7 | 71.2 | 16.9 | ||||
| →4)-α- | Rha | 5.29 [1.9] | 3.96 | 3.80 | 3.56 | 3.77 | 1.30 | C2, | H2, |
| 101.8 {172} | 71.9 | 72.2 | 84.1 | 69.2 | 18.5 | H2, | |||
| β- | Xyl(II) | 4.47 [7.7] | 3.20 | 3.30 | 3.49 | 3.18, 3.89 | C4, | H4, | |
| 107.0 | 76.1 | ~78.2 | ~71.2 | ~67.3 | H4, | ||||
| β- | Xyl(III) | 4.27 [7.7] | 3.18 | 3.30 | 3.49 | 3.18, 3.89 | C5, | ||
| 104.2 | 75.2 | ~78.2 | ~71.2 | ~67.1 | H5, | ||||
| α- | Ara | 4.41 [6.7] | 3.54 | 3.51 | 3.78 | 3.49, 3.84 | C3, | H3, | |
| 105.6 | 72.5 | 74.3 | 69.5 | 66.9 | H3, | ||||
3JH1,H2 values are given in hertz in square brakets and 1JC1,H1 are given in braces. (a) Chemical shifts of these atoms are shown in Table S1 in the Supplementary Materials.