| Literature DB >> 35447701 |
Teresa Araújo1, João Paulo Teixeira2, Pedro Miguel Rodrigues1.
Abstract
BACKGROUND: Alzheimer's Disease (AD) stands out as one of the main causes of dementia worldwide and it represents around 65% of all dementia cases, affecting mainly elderly people. AD is composed of three evolutionary stages: Mild Cognitive Impairment (MCI), Mild and Moderate AD (ADM) and Advanced AD (ADA). It is crucial to create a tool for assisting AD diagnosis in its early stages with the aim of halting the disease progression.Entities:
Keywords: Alzheimer disease; classic machine learning; classification; deep learning; electroencephalographic signals; nonlinear multi-band analysis; wavelet packet
Year: 2022 PMID: 35447701 PMCID: PMC9031324 DOI: 10.3390/bioengineering9040141
Source DB: PubMed Journal: Bioengineering (Basel) ISSN: 2306-5354
Figure 110–20 EEG system—electrodes positions at scalp level.
EEG Database.
| Subjects | C | MCI | ADM | ADA |
|---|---|---|---|---|
| # | 11 | 8 | 11 | 8 |
| Age Average | 74 | 80 | 79 | 79 |
| MMSE Average | 28.68 | 26.29 | 18.89 | 11.50 |
Figure 2Methodology workflow.
Figure 3Wavelet Packet Tree - Example of decomposition until scale level 3.
Figure 4Kruskal–Wallis test—10 best performances achieved by wavelets.
Used classifiers and optimal parameters.
| Classifier | Optimal Parameters | |
|---|---|---|
| Decision Trees | Fine Tree—FT | Maximum number of splits = 150 |
| Medium Tree—MT | Maximum number of splits = 150 | |
| Coarse Tree—CT | Maximum number of splits = 150 | |
| Discriminant Analysis | Linear Discriminant—LD | Covariance structure: Full |
| Quadratic Discriminant—QD | Covariance structure: Full | |
| Logistic Regression - LR | Covariance structure: Full | |
| Naive Bayes | Gaussian Naive Bayes— GNB | - |
| Kernel Naive Bayes—KNB | - | |
| SVM | Linear SVM—LSVM | Box constraint level = 3 |
| Quadratic SVM—QSVM | Box constraint level = 3 | |
| Cubic SVM—CSVM | Box constraint level = 4 | |
| Fine Gaussian SVM—FGSVM | Box constraint level = 3 | |
| Medium Gaussian SVM—MGSVM | Box constraint level = 3 | |
| Coarse Gaussian SVM—CGSVM | Box constraint level = 1 | |
| KNN | Fine KNN—FKNN | Number of neighbors = 3 |
| Medium KNN—MKNN | Number of neighbors = 3 | |
| Coarse KNN—CKNN | Number of neighbors = 3 | |
| Cosine KNN CosKNN | Number of neighbors = 3 | |
| Cubic KNN—CubKNN | Number of neighbors = 3 | |
| Weighted KNN—WKNN | Number of neighbors = 3 | |
| Ensemble | Boosted Trees—BossT | Maximum number of splits = 150 |
| Bagged Trees—Bagt | Maximum number of splits = 150 | |
| Subspace Discriminant—SubD | Covariance structure: Full | |
| Subspace KNN—SubKNN | Number of neighbors = 3 | |
| RUSBoosted Trees—RUSBT | Maximum number of splits = 150 | |
| CNN | imageInputLayer = 1 | |
| convolution2dLayer = 1 | ||
| reluLayer = 1 | ||
| fullyConnectedLayer = 3 | ||
| softmaxLayer = 1 | ||
| classificationLayer = 1 | ||
| Training algorithm = adam | ||
| Max epochs = 1000 | ||
Features combination.
| Features | Maximum Accuracy | |||||
|---|---|---|---|---|---|---|
| C-MCI | C-ADM | C-ADA | MCI-ADM | MCI-ADA | ADM-ADA | |
| 1080 | 73.7% | 76.2% | 68.4% | 83.3% | 87.5% | 72.2% |
| 20% | 73.7% | 76.2% | 78.9% | 88.9% | 93.8% | 72.2% |
| 10% | 78.9% | 76.2% | 78.9% | 88.9% | 93.8% | 72.2% |
| 5% | 78.9% | 76.2% | 78.9% | 83.3% | 93.8% | 77.8% |
| 20 | 73.7% | 81.0% | 78.9% | 88.9% | 93.8% | 77.8% |
| 15 | 78.9% | 81.0% | 78.9% | 88.9% | 93.8% | 77.8% |
| 10 | 78.9% | 76.2% | 78.9% | 88.9% | 87.5% | 77.8% |
| 5 | 78.9% | 76.2% | 84.2% | 88.9% | 93.8% | 77.8% |
| 4 | 78.9% | 76.2% | 84.2% | 83.3% | 93.8% | 77.8% |
| 3 | 78.9% | 81.0% | 84.2% | 83.3% | 93.8% | 77.8% |
| 2 | 73.7% | 81.0% | 84.2% | 83.3% | 93.8% | 77.8% |
Classic Machine learning vs. Deep Learning classification.
| Comparison | Classic ML | Accuracy (Position) | DL | Accuracy (Position) |
|---|---|---|---|---|
| C vs. MCI | FT, MT, & CT | 78.9% (P7 & Pz) | CNN | 78.9% (P8) |
| C vs. ADM | CSVM & FGSVM | 81.0% (C4 & P7) | CNN | 76.2% (Pz) |
| C vs. ADA | LSVM & GNB | 84.2% (F7, C4 & T8) | CNN | 78.9% (F7 & F8) |
| MCI vs. ADM | CosKNN | 88.9% (P7) | CNN | 83.2% (Pz) |
| MCI vs. ADA | FT, MT & CT | 93.8% (O1) | CNN | 93.8 (P4) |
| ADM vs. ADA | FKNN & SubD | 77.8% (F3, F8, C3, C4 & O1) | CNN | 72.2% (Fz, F4 & C4) |
| All vs. All | MGSVM | 56.8% (Pz) | CNN | 51.4% (Pz) |
Figure 5Topographic maps provided by a Classic ML classification.
Comparison with previous works with the same EEG database.
| Study | Signal Processing | Features | Feature Selection | Best Classifier | Classification Accuracy |
|---|---|---|---|---|---|
| [ | Multiband Spectral Analysis via DWT | RP, Spectral Ratios, Maxima, Minima and Zero Crossing | KW Test | ANN | C vs. MCI—77% |
| C vs. AD—95% | |||||
| MCI vs. AD—83% | |||||
| All vs. All—90% | |||||
| [ | Multiband Cepstral and Lacstral Analysis via DWT | Cepstral and Lacstral Distances | Genetic Algorithms | ANN | C vs. MCI—98% |
| C vs. ADM—96% | |||||
| C vs. ADA—96% | |||||
| C vs. ADM-ADA—96% | |||||
| MCI vs. ADM—87% | |||||
| MCI vs. ADA—99% | |||||
| MCI vs. ADM-ADA—94% | |||||
| All vs. All—96% | |||||
| Present Study | Nonlinear and Multiband Analysis via DWPT | Nonlinear and Statistic Parameters | F-score | SVM | C vs. MCI—79% |
| C vs. ADM—81% | |||||
| C vs. ADA—84% | |||||
| MCI vs. ADM—89% | |||||
| MCI vs. ADA—94% | |||||
| ADM vs. ADA—78% | |||||
| All vs. All—57% |
Comparison with previous works with different EEG databases.
| Study | Signal Processing | Features | Feature Selection | Best Classifier | Classification Accuracy |
|---|---|---|---|---|---|
| [ | Fourier and Wavelet Analysis via FFT and DWT | Fourier and Wavelet Coefficients | Not applied | DT | C vs. AD—83% |
| C vs. MCI—92% | |||||
| MCI vs. AD—79% | |||||
| [ | Multiband Analysis via DWT and EMD | Variance, Kurtosis, Skewness, Shannon Entropy, Sure Entropy and Hjorth Parameters | Not applied | KNN | C vs. AD1 vs. AD2—98% |
| Present Study | Nonlinear and Multiband Analysis via DWPT | Nonlinear and Statistic Parameters | F-score | SVM | C vs. MCI—79% |
| C vs. ADM—81% | |||||
| C vs. ADA—84% | |||||
| MCI vs. ADM—89% | |||||
| MCI vs. ADA—94% | |||||
| ADM vs. ADA—78% | |||||
| All vs. All—57% |