| Literature DB >> 35440662 |
Rabindranath Lo1,2, Debashree Manna1,3, Maximilián Lamanec1,4, Martin Dračínský1, Petr Bouř1, Tao Wu1, Guillaume Bastien1, Jiří Kaleta1, Vijay Madhav Miriyala1,2, Vladimír Špirko1, Anna Mašínová1, Dana Nachtigallová5,6, Pavel Hobza7,8.
Abstract
It is generally expected that a solvent has only marginal effect on the stability of a covalent bond. In this work, we present a combined computational and experimental study showing a surprising stabilization of the covalent/dative bond in Me3NBH3 complex with increasing solvent polarity. The results show that for a given complex, its stability correlates with the strength of the bond. Notably, the trends in calculated changes of binding (free) energies, observed with increasing solvent polarity, match the differences in the solvation energies (ΔEsolv) of the complex and isolated fragments. Furthermore, the studies performed on the set of the dative complexes, with different atoms involved in the bond, show a linear correlation between the changes of binding free energies and ΔEsolv. The observed data indicate that the ionic part of the combined ionic-covalent character of the bond is responsible for the stabilizing effects of solvents.Entities:
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Year: 2022 PMID: 35440662 PMCID: PMC9018688 DOI: 10.1038/s41467-022-29806-3
Source DB: PubMed Journal: Nat Commun ISSN: 2041-1723 Impact factor: 17.694
Fig. 1The calculated and observed structural and spectroscopic data of Me3NBH3.
a The optimized geometry of Me3NBH3. The B–N distances (r) are given in the gas phase (ε = 1) and various solvents, cyclohexane (ε = 2.0), carbon disulfide (ε = 2.6), chloroform (ε = 4.8), o-dichlorobenzene (ε = 9.9), and water (ε = 78.0); b the Raman spectra of Me3NBH3 measured in D2O; c the relevant part of the Raman spectra ranging 450–1050 cm−1 in various solvents. The PBE0-D3/def2-QZVP calculated harmonic (in blue color) and anharmonic (in red color) frequencies are shown (C: gray, N: blue, H: white, B: pink).
The experimental B–N indirect coupling (1J(B–N)exp), calculated B–N distance (RB–N), B–N indirect coupling (1J(B–N)calc, deviation from the experiment in parenthesis) and Fermi contact coupling (1JFC(B–N)calc) of Me3NBH3.
| Solvent | 1 | 1 | 1 | ||
|---|---|---|---|---|---|
| Cyclohexane | 2.0 | 5.3 | 4.4 (0.9) | 4.13 | 1.623 |
| Benzene | 2.3 | 6.2 | 4.6 (0.6) | 4.31 | 1.622 |
| Acetone | 20.5 | 6.8 | 5.9 (0.9) | 5.69 | 1.610 |
| Acetonitrile | 35.7 | 7.1 | 6.0 (1.1) | 5.77 | 1.609 |
| Water | 78.0 | 8.5 | 6.1 (2.4) | 5.85 | 1.608 |
The values are calculated at the PBE0/def2-QZVP level.
Observed fundamental frequencies (νobs), harmonic frequencies (νharm), anharmonic (νanharm), and scaled anharmonic (ν) vibrational frequencies calculated using the HBJ approach with rigid-bender reduced masses (μss) and scaled masses (μss/1.0465), respectively (frequencies given in cm−1, the scaling factor 1.0465 chosen to reproduce the experimental B–N fundamental frequency pertaining to water).
| Solvent | PED | ||||||
|---|---|---|---|---|---|---|---|
| Gas phase | 1.0 | 670 | 656 | 642 | 0.12854 | ||
| Cyclohexane | 2.0 | 658 | 69 (18) | 684 (26) | 677 (19) | 663 (5) | 0.12843 |
| Benzene | 2.3 | 673 | 69 (19) | 687 (14) | 681 (8) | 666 (-7) | 0.12840 |
| Chloroform | 4.8 | 679 | 67 (22) | 696 (17) | 696 (17) | 681 (2) | 0.12827 |
| Water | 78.0 | 698 | 65 (26) | 706 (8) | 714 (16) | 698 | 0.12817 |
The deviation from the experiment (Δν) and assignment of B–N stretching with the potential energy distributions, PED% (C–N stretching in parenthesis) of the normal vibrational modes of Me3NBH3 in various solvents. The values are calculated at the PBE0-D3/def2-QZVP level.
Fig. 2The correlation between the observed and calculated properties of Me3NBH3 and the solvent polarity expressed by the dielectric constant ε.
a The observed and calculated an/harmonic frequencies versus ε; b the calculated Δ(ΔG), Δ(ΔEinter), Δ(ΔEintrin), ΔEsolv versus ε; and c the force constant and vibration frequency of B–N stretching mode versus ε. The values are calculated at the PBE0-D3/def2-QZVP level.
The interaction energies (ΔEinter, kcal/mol), thermodynamics characteristics (ΔG, kcal/mol), differences in the solvation energies (ΔEsolv, kcal/mol), intrinsic energies (ΔEintrin, kcal/mol), force constants (k, mDyne/Å), and the relative charge transfer (Qrel) of Me3NBH3 in various solvents.
| Solvent | Δ | Δ | Δ | Δ | |||
|---|---|---|---|---|---|---|---|
| Gas phase | 1.0 | −41.8 | −57.6 | −24.9 | 0.0 | 0.941 | 0.0 |
| Cyclohexane | 2.0 | −43.7 | −60.1 | −26.8 | 2.0 | 0.968 | 0.019 |
| Chloroform | 4.8 | −45.6 | −62.7 | −28.7 | 3.9 | 0.987 | 0.032 |
| 9.9 | −46.6 | −63.9 | −29.7 | 4.9 | 0.996 | 0.038 | |
| Water | 78.0 | −47.5 | −65.2 | −30.7 | 5.9 | 1.006 | 0.043 |
The values are calculated at the PBE0-D3/def2-QZVP level.
aThe values relate to Q in the gas phase (Q = 0.347).
The thermodynamic characteristics calculated in the gas phase (ΔGgas, kcal/mol), o-dichlorobenzene (ΔGo-DCB, kcal/mol), their differences Δ(ΔG), kcal/mol), and differences in the solvation energies (ΔEsolv, kcal/mol) of selected dative bond complexes.
| Δ | Δ | ∆(∆ | ∆ | |
|---|---|---|---|---|
| N → B | ||||
| H3B-NH3 | −19.5 | −27.5 | 8.0 | 8.4 |
| H3B-NMe3 | −24.9 | −29.7 | 4.8 | 4.9 |
| F3B-NH3 | −9.0 | −19.1 | 10.1 | 11.3 |
| F3B-NMe3 | −13.6 | −19.0 | 5.4 | 6.0 |
| N → C | ||||
| C60…pip2 | 4.3 | 0.9 | 3.4 | 4.2 |
| C70…pip2 | 1.8 | −2.2 | 4.0 | 4.4 |
| C18…pip | −1.6 | −15.3 | 13.7 | 15.5 |
| P → B | ||||
| H3B-PMe3 | −31.8 | −36.1 | 4.3 | 4.5 |
| P → C | ||||
| C60…P(pyrr)3 | −0.7 | −5.2 | 4.5 | 6.1 |
| C60F18…P(pyrr)3 | −6.1 | −10.1 | 4.0 | 5.5 |
| C60(CN)4…P(pyrr)3 | −6.0 | −9.3 | 3.3 | 4.7 |
| C60(CN)18…P(pyrr)3 | −16.3 | −16.5 | 0.2 | 0.7 |
The N → B and P → B complexes are calculated at the PBE0-D3/def2-QZVP, whereas C18 complex is computed at the ωB97XD/def2-TZVPP level. The other complexes are calculated at the PBE0-D3BJ/def2-TZVPP level.