| Literature DB >> 35436321 |
Thomas W Georgi1, Axel Zieschank2, Kevin Kornrumpf2, Lars Kurch1, Osama Sabri1, Dieter Körholz3, Christine Mauz-Körholz3, Regine Kluge1, Stefan Posch2.
Abstract
INTRODUCTION: The automatic classification of lymphoma lesions in PET is a main topic of ongoing research. An automatic algorithm would enable the swift evaluation of PET parameters, like texture and heterogeneity markers, concerning their prognostic value for patients outcome in large datasets. Moreover, the determination of the metabolic tumor volume would be facilitated. The aim of our study was the development and evaluation of an automatic algorithm for segmentation and classification of lymphoma lesions in PET.Entities:
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Year: 2022 PMID: 35436321 PMCID: PMC9015138 DOI: 10.1371/journal.pone.0267275
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Features of the segmented volumes used for classification.
| Features for Classification | |||
|---|---|---|---|
| SUV-based features | Shape-based features | Spatial location features | |
| Maximum SUV | Mean absolute deviation of SUV | Area surface ratio | Direction of major axis (x) |
| Minimium SUV | Root mean squared of SUV | Surface difference | Direction of major axis (y) |
| Mean SUV | Standard deviation of SUV | Scaled surface area | Direction of major axis (z) |
| Median SUV | Skewness of SUV | Scaled volume | Location of centorid (x) |
| Range of SUV | Coarseness of NGTDM | Compactness | Location of centorid (y) |
| Variance of SUV | Contrast of NGTDM | Maximum diameter | Location of centorid (z) |
| Energy of SUV | Busyness of NGTDM | ||
| Entropy of SUV | Complexity of NGTDM | ||
| Kurtosis of SUV | Outside difference | ||
| Uniformity of SUV | |||
1) Mean difference of SUV values between volume and surrounding.
2) Estimated average ratio of eucliden vs surface distance of surface voxel pairs.
Abbreviations: SUV—Standard uptake value, NGTDM—Neighboring gray tone difference matrix.
Fig 1Methodical workflow of the classification algorithm.
Confusion matrix of manual and automatic classification of the segmented volumes.
| Manual Classification | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| T | T+NT | SK | HN | HT | RK | LK | LI | GI | G | BL | BF | NT+NT | sum | ||
| Automatic Classification | T | 182 | 7 | 9 | 5 | 5 | 1 | 5 | 0 | 13 | 2 | 1 | 7 | 3 | 240 |
| T+NT | 4 | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 16 | |
| SK | 15 | 2 | 277 | 0 | 2 | 4 | 0 | 1 | 6 | 0 | 1 | 1 | 0 | 309 | |
| HN | 11 | 1 | 4 | 81 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 98 | |
| HAT | 1 | 0 | 0 | 0 | 24 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 25 | |
| RK | 2 | 0 | 1 | 0 | 0 | 61 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 64 | |
| LK | 6 | 1 | 1 | 0 | 0 | 0 | 60 | 0 | 0 | 0 | 0 | 1 | 0 | 69 | |
| LI | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
| GI | 3 | 0 | 3 | 0 | 0 | 1 | 2 | 0 | 17 | 1 | 0 | 0 | 1 | 28 | |
| G | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | |
| BL | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
| BF | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 3 | |
| NT+NT | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
| sum | 225 | 21 | 295 | 86 | 31 | 67 | 67 | 1 | 37 | 3 | 2 | 12 | 6 | 853 | |
Abbreviations: T—Tumor, T+NT—Composed volume of tumor and non-tumor tissue, SK—Skeleton, HN—Head-and-neck-region, HT—Heart, RT- Right kidney, LK—Left kidney, LI—Liver, GI—Gastrointestinal tract, G—Genital organs, BL—Urinary bladder, BF—Activated brown fat tissue, NT+NT—composed volumes of more than one non-tumor tissue type (NT+NT).
Fig 2Patient from the EuroNet-PHL-C1 study with an optimal automatic classification.
Fig 3Patient from the EuroNet-PHL-C1 study with a suboptimal automatic classification and incorrect cropping at the upper border.