Literature DB >> 35434846

Bayesian deep learning outperforms clinical trial estimators of intracerebral and intraventricular hemorrhage volume.

Matthew F Sharrock1, W Andrew Mould2, Meghan Hildreth2, E Paul Ryu2, Nathan Walborn2, Issam A Awad3, Daniel F Hanley2, John Muschelli4.   

Abstract

BACKGROUND AND
PURPOSE: Intracerebral hemorrhage (ICH) and intraventricular hemorrhage (IVH) clinical trials rely on manual linear and semi-quantitative (LSQ) estimators like the ABC/2, modified Graeb and IVH scores for timely volumetric estimation from CT. Deep learning (DL) volumetrics of ICH have recently approached the accuracy of gold-standard planimetry. However, DL and LSQ strategies have been limited by unquantified uncertainty, in particular when ICH and IVH estimates intersect. Bayesian deep learning methods can be used to approximate uncertainty, presenting an opportunity to improve quality assurance in clinical trials.
METHODS: A DL model was trained to simultaneously segment ICH and IVH using diagnostic CT data from the Minimally Invasive Surgery Plus Alteplase for ICH Evacuation (MISTIE) III and Clot Lysis: Evaluating Accelerated Resolution of IVH (CLEAR) III clinical trials. Bayesian uncertainty approximation was performed using Monte-Carlo dropout. We compared the performance of our model with estimators used in the CLEAR IVH and MISTIE II trials. The reliability of planimetry, DL, and LSQ volumetrics in the setting of high ICH and IVH intersection is quantified using consensus estimates.
RESULTS: Our DL model produced volume correlations and median Dice scores of .994 and .946 for ICH in MISTIE II, and .980 and .863 for IVH in CLEAR IVH, respectively, outperforming LSQ estimates from the clinical trials. We found significant linear relationships between ICH uncertainty, Dice scores (r = -.849), and relative volume difference (r = .735).
CONCLUSION: In our validation clinical trial dataset, DL models with Bayesian uncertainty approximation provided superior volumetric estimates to LSQ methods with real-time estimates of model uncertainty.
© 2022 American Society of Neuroimaging.

Entities:  

Keywords:  clinical trials; intracerebral hemorrhage; neural networks; neuroimaging

Mesh:

Substances:

Year:  2022        PMID: 35434846      PMCID: PMC9474710          DOI: 10.1111/jon.12997

Source DB:  PubMed          Journal:  J Neuroimaging        ISSN: 1051-2284            Impact factor:   2.324


  37 in total

1.  Simultaneous truth and performance level estimation (STAPLE): an algorithm for the validation of image segmentation.

Authors:  Simon K Warfield; Kelly H Zou; William M Wells
Journal:  IEEE Trans Med Imaging       Date:  2004-07       Impact factor: 10.048

2.  Thrombolytic removal of intraventricular haemorrhage in treatment of severe stroke: results of the randomised, multicentre, multiregion, placebo-controlled CLEAR III trial.

Authors:  Daniel F Hanley; Karen Lane; Nichol McBee; Wendy Ziai; Stanley Tuhrim; Kennedy R Lees; Jesse Dawson; Dheeraj Gandhi; Natalie Ullman; W Andrew Mould; Steven W Mayo; A David Mendelow; Barbara Gregson; Kenneth Butcher; Paul Vespa; David W Wright; Carlos S Kase; J Ricardo Carhuapoma; Penelope M Keyl; Marie Diener-West; John Muschelli; Joshua F Betz; Carol B Thompson; Elizabeth A Sugar; Gayane Yenokyan; Scott Janis; Sayona John; Sagi Harnof; George A Lopez; E Francois Aldrich; Mark R Harrigan; Safdar Ansari; Jack Jallo; Jean-Louis Caron; David LeDoux; Opeolu Adeoye; Mario Zuccarello; Harold P Adams; Michael Rosenblum; Richard E Thompson; Issam A Awad
Journal:  Lancet       Date:  2017-01-10       Impact factor: 79.321

3.  The Safety and Feasibility of Image-Guided BrainPath-Mediated Transsulcul Hematoma Evacuation: A Multicenter Study.

Authors:  Mohamed A Labib; Mitesh Shah; Amin B Kassam; Ronald Young; Lloyd Zucker; Anthony Maioriello; Gavin Britz; Charles Agbi; J D Day; Gary Gallia; Robert Kerr; Gustavo Pradilla; Richard Rovin; Charles Kulwin; Julian Bailes
Journal:  Neurosurgery       Date:  2017-04-01       Impact factor: 4.654

4.  The ABCs of measuring intracerebral hemorrhage volumes.

Authors:  R U Kothari; T Brott; J P Broderick; W G Barsan; L R Sauerbeck; M Zuccarello; J Khoury
Journal:  Stroke       Date:  1996-08       Impact factor: 7.914

5.  Primary intraventricular hemorrhage in adults.

Authors:  P C Gates; H J Barnett; H V Vinters; R L Simonsen; K Siu
Journal:  Stroke       Date:  1986 Sep-Oct       Impact factor: 7.914

6.  Volume of intracerebral hemorrhage. A powerful and easy-to-use predictor of 30-day mortality.

Authors:  J P Broderick; T G Brott; J E Duldner; T Tomsick; G Huster
Journal:  Stroke       Date:  1993-07       Impact factor: 7.914

Review 7.  Accuracy of the ABC/2 Score for Intracerebral Hemorrhage: Systematic Review and Analysis of MISTIE, CLEAR-IVH, and CLEAR III.

Authors:  Alastair J S Webb; Natalie L Ullman; Tim C Morgan; John Muschelli; Joshua Kornbluth; Issam A Awad; Stephen Mayo; Michael Rosenblum; Wendy Ziai; Mario Zuccarrello; Francois Aldrich; Sayona John; Sagi Harnof; George Lopez; William C Broaddus; Christine Wijman; Paul Vespa; Ross Bullock; Stephen J Haines; Salvador Cruz-Flores; Stan Tuhrim; Michael D Hill; Raj Narayan; Daniel F Hanley
Journal:  Stroke       Date:  2015-08-04       Impact factor: 7.914

8.  Exploring uncertainty measures in deep networks for Multiple sclerosis lesion detection and segmentation.

Authors:  Tanya Nair; Doina Precup; Douglas L Arnold; Tal Arbel
Journal:  Med Image Anal       Date:  2019-09-07       Impact factor: 8.545

9.  PItcHPERFeCT: Primary Intracranial Hemorrhage Probability Estimation using Random Forests on CT.

Authors:  John Muschelli; Elizabeth M Sweeney; Natalie L Ullman; Paul Vespa; Daniel F Hanley; Ciprian M Crainiceanu
Journal:  Neuroimage Clin       Date:  2017-02-15       Impact factor: 4.881

10.  3D Deep Neural Network Segmentation of Intracerebral Hemorrhage: Development and Validation for Clinical Trials.

Authors:  Matthew F Sharrock; W Andrew Mould; Hasan Ali; Meghan Hildreth; Issam A Awad; Daniel F Hanley; John Muschelli
Journal:  Neuroinformatics       Date:  2020-09-27
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