Literature DB >> 35430716

Tubular shape aware data generation for segmentation in medical imaging.

Ilyas Sirazitdinov1,2, Heinrich Schulz3, Axel Saalbach3, Steffen Renisch3, Dmitry V Dylov4.   

Abstract

PURPOSE: Chest X-ray is one of the most widespread examinations of the human body. In interventional radiology, its use is frequently associated with the need to visualize various tube-like objects, such as puncture needles, guiding sheaths, wires, and catheters. Detection and precise localization of these tube-like objects in the X-ray images are, therefore, of utmost value, catalyzing the development of accurate target-specific segmentation algorithms. Similar to the other medical imaging tasks, the manual pixel-wise annotation of the tubes is a resource-consuming process.
METHODS: In this work, we aim to alleviate the lack of annotated images by using artificial data. Specifically, we present an approach for synthetic generation of the tube-shaped objects, with a generative adversarial network being regularized with a prior-shape constraint. Namely, our model uses Frangi-based regularization to draw synthetic tubes in the predefined fake mask regions and, then, uses the adversarial component to preserve the global realistic appearance of the synthesized image.
RESULTS: Our method eliminates the need for the paired image-mask data and requires only a weakly labeled dataset, with fine-tuning on a small paired sample (10-20 images) proving sufficient to reach the accuracy of the fully supervised models.
CONCLUSION: We report the applicability of the approach for the task of segmenting tubes and catheters in the X-ray images, whereas the results should also hold for the other acquisition modalities and image computing applications that contain tubular objects.
© 2022. CARS.

Entities:  

Keywords:  Generative adversarial network; Neural network; Shape analysis; Weakly supervised segmentation; X-ray imaging

Mesh:

Year:  2022        PMID: 35430716     DOI: 10.1007/s11548-022-02621-3

Source DB:  PubMed          Journal:  Int J Comput Assist Radiol Surg        ISSN: 1861-6410            Impact factor:   2.924


  1 in total

1.  Towards a better understanding of annotation tools for medical imaging: a survey.

Authors:  Manar Aljabri; Manal AlAmir; Manal AlGhamdi; Mohamed Abdel-Mottaleb; Fernando Collado-Mesa
Journal:  Multimed Tools Appl       Date:  2022-03-25       Impact factor: 2.577

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.