Literature DB >> 3542963

Roles of the divergent branches of the meta-cleavage pathway in the degradation of benzoate and substituted benzoates.

S Harayama, N Mermod, M Rekik, P R Lehrbach, K N Timmis.   

Abstract

The TOL plasmid-specified meta-cleavage pathway for the oxidative catabolism of benzoate and toluates branches at the ring cleavage products of catechols and reconverges later at 2-oxopent-4-enoate or its corresponding substituted derivatives. The hydrolytic branch of the pathway involves the direct formation of 2-oxopent-4-enoate or its derivatives, whereas the oxalocrotonate branch involves three enzymatic steps effected by a dehydrogenase, an isomerase, and a decarboxylase, which produce the same compounds. Evidence is presented which shows that benzoate and p-toluate can, under certain circumstances, be catabolized by the hydrolytic branch. However, in a fully functional pathway, only m-toluate is dissimilated via this branch, and benzoate and p-toluate are catabolized almost exclusively by the oxalocrotonate branch. The biochemical basis of this selectivity was found to reside in the high affinity of the dehydrogenase for ring fission products derived from benzoate and p-toluate and its inability to attack the ring fission product derived from m-toluate. Although isomerization of 4-oxalocrotonate occurs spontaneously in vitro, enzymatic isomerization was found to be essential for effective functioning of this branch of the pathway in vivo.

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Year:  1987        PMID: 3542963      PMCID: PMC211814          DOI: 10.1128/jb.169.2.558-564.1987

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  36 in total

1.  A new metabolic pathway of catechol.

Authors:  Y NISHIZUKA; A ICHIYAMA; S NAKAMURA; O HAYAISHI
Journal:  J Biol Chem       Date:  1962-01       Impact factor: 5.157

2.  Supercoiled circular DNA-protein complex in Escherichia coli: purification and induced conversion to an opern circular DNA form.

Authors:  D B Clewell; D R Helinski
Journal:  Proc Natl Acad Sci U S A       Date:  1969-04       Impact factor: 11.205

3.  The conversion of catechol and protocatechuate to beta-ketoadipate by Pseudomonas putida. IV. Regulation.

Authors:  L N Ornston
Journal:  J Biol Chem       Date:  1966-08-25       Impact factor: 5.157

4.  Genetic analysis of a relaxed substrate specificity aromatic ring dioxygenase, toluate 1,2-dioxygenase, encoded by TOL plasmid pWW0 of Pseudomonas putida.

Authors:  S Harayama; M Rekik; K N Timmis
Journal:  Mol Gen Genet       Date:  1986-02

5.  THE BACTERIAL DEGRADATION OF CATECHOL.

Authors:  S DAGLEY; D T GIBSON
Journal:  Biochem J       Date:  1965-05       Impact factor: 3.857

6.  Metabolism of arylsulphonates by micro-organisms.

Authors:  R B Cain; D R Farr
Journal:  Biochem J       Date:  1968-02       Impact factor: 3.857

7.  Transposon mutagenesis analysis of meta-cleavage pathway operon genes of the TOL plasmid of Pseudomonas putida mt-2.

Authors:  S Harayama; P R Lehrbach; K N Timmis
Journal:  J Bacteriol       Date:  1984-10       Impact factor: 3.490

8.  Oxoenoic acids as metabolites in the bacterial degradation of catechols.

Authors:  R C Bayly; S Dagley
Journal:  Biochem J       Date:  1969-02       Impact factor: 3.857

9.  Phenol and benzoate metabolism by Pseudomonas putida: regulation of tangential pathways.

Authors:  C F Feist; G D Hegeman
Journal:  J Bacteriol       Date:  1969-11       Impact factor: 3.490

10.  Transcription of the TOL plasmid toluate catabolic pathway operon of Pseudomonas putida is determined by a pair of co-ordinately and positively regulated overlapping promoters.

Authors:  N Mermod; P R Lehrbach; W Reineke; K N Timmis
Journal:  EMBO J       Date:  1984-11       Impact factor: 11.598

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  20 in total

1.  Genetic and structural organization of the aminophenol catabolic operon and its implication for evolutionary process.

Authors:  H S Park; H S Kim
Journal:  J Bacteriol       Date:  2001-09       Impact factor: 3.490

Review 2.  The TOL (pWW0) catabolic plasmid.

Authors:  R S Burlage; S W Hooper; G S Sayler
Journal:  Appl Environ Microbiol       Date:  1989-06       Impact factor: 4.792

3.  Assessment of toluene/biphenyl dioxygenase gene diversity in benzene-polluted soils: links between benzene biodegradation and genes similar to those encoding isopropylbenzene dioxygenases.

Authors:  Robert Witzig; Howard Junca; Hans-Jürgen Hecht; Dietmar H Pieper
Journal:  Appl Environ Microbiol       Date:  2006-05       Impact factor: 4.792

4.  Degradation of Benzene by Pseudomonas veronii 1YdBTEX2 and 1YB2 Is Catalyzed by Enzymes Encoded in Distinct Catabolism Gene Clusters.

Authors:  Daiana de Lima-Morales; Diego Chaves-Moreno; Melissa L Wos-Oxley; Ruy Jáuregui; Ramiro Vilchez-Vargas; Dietmar H Pieper
Journal:  Appl Environ Microbiol       Date:  2015-10-16       Impact factor: 4.792

5.  Selection for growth on 3-nitrotoluene by 2-nitrotoluene-utilizing Acidovorax sp. strain JS42 identifies nitroarene dioxygenases with altered specificities.

Authors:  Kristina M Mahan; Joseph T Penrod; Kou-San Ju; Natascia Al Kass; Watumesa A Tan; Richard Truong; Juanito V Parales; Rebecca E Parales
Journal:  Appl Environ Microbiol       Date:  2014-10-24       Impact factor: 4.792

6.  Degradation of 2,3-dihydroxybenzoate by a novel meta-cleavage pathway.

Authors:  Macarena Marín; Iris Plumeier; Dietmar H Pieper
Journal:  J Bacteriol       Date:  2012-05-18       Impact factor: 3.490

Review 7.  Functional genomic analysis of bacterial lignin degraders: diversity in mechanisms of lignin oxidation and metabolism.

Authors:  Rommel Santiago Granja-Travez; Gabriela Felix Persinoti; Fabio M Squina; Timothy D H Bugg
Journal:  Appl Microbiol Biotechnol       Date:  2020-02-22       Impact factor: 4.813

8.  Degradation of 4-Chlorophenol via the meta Cleavage Pathway by Comamonas testosteroni JH5.

Authors:  J Hollender; J Hopp; W Dott
Journal:  Appl Environ Microbiol       Date:  1997-11       Impact factor: 4.792

9.  A meta cleavage pathway for 4-chlorobenzoate, an intermediate in the metabolism of 4-chlorobiphenyl by Pseudomonas cepacia P166.

Authors:  J J Arensdorf; D D Focht
Journal:  Appl Environ Microbiol       Date:  1995-02       Impact factor: 4.792

10.  Metagenomics reveals diversity and abundance of meta-cleavage pathways in microbial communities from soil highly contaminated with jet fuel under air-sparging bioremediation.

Authors:  Maria V Brennerova; Jirina Josefiova; Vladimir Brenner; Dietmar H Pieper; Howard Junca
Journal:  Environ Microbiol       Date:  2009-02-19       Impact factor: 5.491

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