| Literature DB >> 35419280 |
Liang Ma1, Jian Gong2, Meimei Zhao1, Xiaomu Kong1, Peng Gao1, Yongwei Jiang1, Yi Liu1, Xiaoyan Feng2, Shuang Si3, Yongtong Cao1.
Abstract
Background: Because of poor compliance or low sensitivity, existing diagnostic approaches are unable to provide an efficient diagnosis of patients with gastric and colorectal cancer. Here, we developed the ColoCaller test, which simultaneously detects the methylation status of the SDC2, TFPI2, WIF1, and NDRG4 genes in stool DNA, to optimize the screening of gastric and colorectal cancer in high-risk populations.Entities:
Keywords: early detection; gastric and colorectal cancer; methylation; multi-gene; support vector machine
Year: 2022 PMID: 35419280 PMCID: PMC8995552 DOI: 10.3389/fonc.2022.860701
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 6.244
Figure 1Study flowchart. GC, gastric cancer; CRC, colorectal cancer; AA, advanced adenomas; LASSO, Least Absolute Shrinkage and Selection Operation.
Clinicopathological characteristic of patients analyzed.
| Variable | No. of patients (n, %) | No. of ColoCaller test positive (n, %) |
|---|---|---|
|
| 217 | 57 (26.27) |
|
| 39 (17.97) | 37 (94.87) |
| Sex | ||
| Male | 28 (71.79) | 28 (100) |
| Female | 11 (28.21) | 9 (81.82) |
| Age | ||
| 40-50 | 31 (79.49) | 29 (93.55) |
| >50 | 8 (20.51) | 8 (100) |
| Location | ||
| Left | 35 (89.74) | 33 (94.29) |
| Right | 4 (10.26) | 4 (100) |
| TNM stage | ||
| I | 9 (23.07) | 8 (88.89) |
| II | 16 (41.03) | 15 (93.75) |
| III/IV | 14 (35.90) | 14 (100) |
|
| 6 (2.76) | 6 (100) |
|
| 35 (16.13) | 11 (31.43) |
|
| 12 (5.53) | 0 (0) |
|
| 6 (2.76) | 0 (0) |
|
| 6 (2.76) | 0 (0) |
|
| 6 (2.76) | 1 (16.67) |
Figure 2Diagnostic performance of ColoCaller test in 217 stool DNA. Receiver operating characteristics (ROC) curves of ColoCaller test for CRC in the training (A), validation (B) and entire (C) group. (D) Performance of ColoCaller for gastric cancer (GC) detection.
Comparison performance of ColoCaller test in CRC.
| Pathological characteristics of CRC | ||||
|---|---|---|---|---|
| + | - b | Total | ||
|
|
| 43 | 14 | 57 |
|
| 2 | 158 | 160 | |
|
| 45 | 172 | 217 | |
|
| 95.56% (85.17%-98.77%) | |||
|
| 91.86% (86.80%-95.09%) | |||
, “+” means methylation positive, and b, means methylation negative.
Comparison performance of ColoCaller test in GCC.
| Pathological characteristics of GCC | |||||
|---|---|---|---|---|---|
| +a | -b | Total | |||
|
|
| 54 | 3 | 58 | |
|
| 26 | 134 | 159 | ||
|
| 80 | 137 | 217 | ||
|
| 67.5% (56.64%-77.85%) | ||||
|
| 97.81% (93.76-99.25%) | ||||
, “+” means methylation positive, and b, means methylation negative.