Literature DB >> 35414995

Band selection for oxygenation estimation with multispectral/hyperspectral imaging.

Leonardo Ayala1,2,3,4, Fabian Isensee5,6,3, Sebastian J Wirkert1, Anant S Vemuri1, Klaus H Maier-Hein5,2,7, Baowei Fei8,9,10, Lena Maier-Hein1,2,7,11.   

Abstract

Multispectral imaging provides valuable information on tissue composition such as hemoglobin oxygen saturation. However, the real-time application of this technique in interventional medicine can be challenging due to the long acquisition times needed for large amounts of hyperspectral data with hundreds of bands. While this challenge can partially be addressed by choosing a discriminative subset of bands, the band selection methods proposed to date are mainly restricted by the availability of often hard to obtain reference measurements. We address this bottleneck with a new approach to band selection that leverages highly accurate Monte Carlo (MC) simulations. We hypothesize that a so chosen small subset of bands can reproduce or even improve upon the results of a quasi continuous spectral measurement. We further investigate whether novel domain adaptation techniques can address the inevitable domain shift stemming from the use of simulations. Initial results based on in silico and in vivo experiments suggest that 10-20 bands are sufficient to closely reproduce results from spectral measurements with 101 bands in the 500-700 nm range. The investigated domain adaptation technique, which only requires unlabeled in vivo measurements, yielded better results than the pure in silico band selection method. Overall, our method could guide development of fast multispectral imaging systems suited for interventional use without relying on complex hardware setups or manually labeled data.
© 2022 Optical Society of America under the terms of the OSA Open Access Publishing Agreement.

Entities:  

Year:  2022        PMID: 35414995      PMCID: PMC8973188          DOI: 10.1364/BOE.441214

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  19 in total

1.  Estimating mutual information.

Authors:  Alexander Kraskov; Harald Stögbauer; Peter Grassberger
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2004-06-23

2.  Quantitative analysis of multi-spectral fundus images.

Authors:  I B Styles; A Calcagni; E Claridge; F Orihuela-Espina; J M Gibson
Journal:  Med Image Anal       Date:  2006-07-24       Impact factor: 8.545

Review 3.  Medical hyperspectral imaging: a review.

Authors:  Guolan Lu; Baowei Fei
Journal:  J Biomed Opt       Date:  2014-01       Impact factor: 3.170

Review 4.  Hyperspectral interventional imaging for enhanced tissue visualization and discrimination combining band selection methods.

Authors:  Dorra Nouri; Yves Lucas; Sylvie Treuillet
Journal:  Int J Comput Assist Radiol Surg       Date:  2016-07-04       Impact factor: 2.924

5.  Image enhancement based on in vivo hyperspectral gastroscopic images: a case study.

Authors:  Xiaozhou Gu; Zhimin Han; Liqing Yao; Yunshi Zhong; Qiang Shi; Ye Fu; Changsheng Liu; Xiguang Wang; Tianyu Xie
Journal:  J Biomed Opt       Date:  2016-10       Impact factor: 3.170

6.  Optimization of Band Selection in Multispectral and Narrow-Band Imaging: An Analytical Approach.

Authors:  Guennadi Saiko; Andrei Betlen
Journal:  Adv Exp Med Biol       Date:  2020       Impact factor: 2.622

7.  Framework for hyperspectral image processing and quantification for cancer detection during animal tumor surgery.

Authors:  Guolan Lu; Dongsheng Wang; Xulei Qin; Luma Halig; Susan Muller; Hongzheng Zhang; Amy Chen; Brian W Pogue; Zhuo Georgia Chen; Baowei Fei
Journal:  J Biomed Opt       Date:  2015       Impact factor: 3.170

8.  Next-generation acceleration and code optimization for light transport in turbid media using GPUs.

Authors:  Erik Alerstam; William Chun Yip Lo; Tianyi David Han; Jonathan Rose; Stefan Andersson-Engels; Lothar Lilge
Journal:  Biomed Opt Express       Date:  2010-08-23       Impact factor: 3.732

9.  Robust near real-time estimation of physiological parameters from megapixel multispectral images with inverse Monte Carlo and random forest regression.

Authors:  Sebastian J Wirkert; Hannes Kenngott; Benjamin Mayer; Patrick Mietkowski; Martin Wagner; Peter Sauer; Neil T Clancy; Daniel S Elson; Lena Maier-Hein
Journal:  Int J Comput Assist Radiol Surg       Date:  2016-05-03       Impact factor: 2.924

10.  Optimal wavelength selection for optical spectroscopy of hemoglobin and water within a simulated light-scattering tissue.

Authors:  Mikael Marois; Steven L Jacques; Keith D Paulsen
Journal:  J Biomed Opt       Date:  2018-01       Impact factor: 3.170

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  1 in total

1.  SIMPA: an open-source toolkit for simulation and image processing for photonics and acoustics.

Authors:  Janek Gröhl; Kris K Dreher; Melanie Schellenberg; Tom Rix; Niklas Holzwarth; Patricia Vieten; Leonardo Ayala; Sarah E Bohndiek; Alexander Seitel; Lena Maier-Hein
Journal:  J Biomed Opt       Date:  2022-04       Impact factor: 3.758

  1 in total

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