| Literature DB >> 35414902 |
Yu-Jie Zhang1,2, Wei Song1,2, Li-Jun Cao2, Jin-Cui Chen2, Ary A Hoffmann3, Jun-Bao Wen1, Shu-Jun Wei2.
Abstract
Increasing damage of pests in agriculture and forestry can arise both as a consequence of changes in local species and through the introduction of alien species. In this study, we used population genetics approaches to examine population processes of two pests of the tree-of-heaven trunk weevil (TTW), Eucryptorrhynchus brandti (Harold) and the tree-of-heaven root weevil (TRW), E. scrobiculatus (Motschulsky) on the tree-of-heaven across their native range of China. We analyzed the population genetics of the two weevils based on ten highly polymorphic microsatellite markers. Population genetic diversity analysis showed strong population differentiation among populations of each species, with F ST ranges from 0.0197 to 0.6650 and from -0.0724 to 0.6845, respectively. Populations from the same geographic areas can be divided into different genetic clusters, and the same genetic cluster contained populations from different geographic populations, pointing to dispersal of the weevils possibly being human-mediated. Redundancy analysis showed that the independent effects of environment and geography could account for 93.94% and 29.70% of the explained genetic variance in TTW, and 41.90% and 55.73% of the explained genetic variance in TRW, respectively, indicating possible impacts of local climates on population genetic differentiation. Our study helps to uncover population genetic processes of these local pest species with relevance to control methods.Entities:
Keywords: E. scrobiculatus; Eucryptorrhynchus brandti; dispersal; microsatellite; population genetics
Year: 2022 PMID: 35414902 PMCID: PMC8986550 DOI: 10.1002/ece3.8806
Source DB: PubMed Journal: Ecol Evol ISSN: 2045-7758 Impact factor: 2.912
Collection information for specimens of Eucryptorrhynchus brandti (TTW) and E. scrobiculatus (TRW) used in the study
| Code | Collection location | Longitude (E) | Latitude (N) | Collection date | No. (TTW/TRW) | Species |
|---|---|---|---|---|---|---|
| BJCY | Beijing, Chaoyang district | 116.37 | 40.00 | May−2018 | 0/5 | TRW |
| BJHD | Beijing, Haidian district | 116.22 | 40.04 | July−2018 | 13/13 | TTW and TRW |
| BJHR | Beijing, Huairou district | 116.66 | 40.41 | June−2018 | 12/13 | TTW and TRW |
| BJSY | Beijing, Shunyi district | 116.77 | 40.10 | May−2020 | 20/10 | TTW and TRW |
| BJYQ | Beijing, Yanqing district | 115.89 | 40.51 | June−2018 | 20/0 | TTW |
| HBJZ | Hubei Province, Jingzhou | 112.89 | 30.01 | September−2020 | 5/0 | TTW |
| HNZZ | Henan Province, Zhengzhou | 113.56 | 34.67 | June−2021 | 20/0 | TTW |
| LNDL | Liaoning Province, Dalian | 122.96 | 39.97 | September−2019 | 10/7 | TTW and TRW |
| NXLW | Ningxia Hui Autonomous Region, Lingwu | 106.26 | 38.12 | April−2018 | 12/12 | TTW and TRW |
| NXPL | Ningxia Hui Autonomous Region, Pingluo | 106.48 | 38.86 | April−2018 | 13/13 | TTW and TRW |
| NXZW | Ningxia Hui Autonomous Region, Zhongwei | 105.12 | 37.50 | April−2018 | 13/13 | TTW and TRW |
| SDRZ | Shandong Province, Rizhao | 118.95 | 35.66 | July−2018 | 16/15 | TTW and TRW |
| SDTA | Shandong Province, Taian | 116.72 | 36.27 | August−2018 | 12/0 | TTW |
| SXYC | Shanxi Province, Yuncheng | 111.48 | 35.29 | July−2018 | 0/5 | TRW |
| SXYL | Shanxi Province, Yangling | 108.07 | 34.26 | July−2018 | 0/12 | TRW |
| TJTJ | Tianjin | 117.20 | 39.13 | September−2020 | 14/0 | TTW |
FIGURE 1Collection sites for samples of Eucryptorrhynchus brandti (TTW, red) and E. scrobiculatus (TRW, green). Codes for collection sites are same as shown in Table 1. *Populations used for developing microsatellites of TTW and TRW
Parameters of genetic diversity in populations of Eucryptorrhynchus brandti (TTW)
| Population |
|
|
|
|
|
|
|
|
|
|---|---|---|---|---|---|---|---|---|---|
| BJHD | 13 | 45 | 28.46 | 1.57 | 0.07 | 0.15 | 0.43 | 0.42 | 0.18 |
| BJHR | 12 | 42 | 32.15 | 1.74 | 0.14 | 0.22 | 0.57 | 0.57 | 0.13 |
| BJSY | 20 | 35 | 21.87 | 1.57 | 0.00 | 0.16 | 0.29 | 0.28 | 0.08 |
| BJYQ | 20 | 54 | 29.36 | 1.75 | 0.10 | 0.23 | 0.47 | 0.46 | 0.01 |
| HBJZ | 5 | 35 | 35.00 | 1.97 | 0.27 | 0.24 | 0.59 | 0.59 | 0.20 |
| HNZZ | 20 | 39 | 26.19 | 1.72 | 0.03 | 0.30 | 0.40 | 0.40 | −0.24 |
| LNDL | 10 | 39 | 32.03 | 1.50 | 0.02 | 0.18 | 0.56 | 0.56 | 0.01 |
| NXLW | 12 | 24 | 20.70 | 1.97 | 0.24 | 0.35 | 0.31 | 0.31 | −0.13 |
| NXPL | 13 | 27 | 21.08 | 1.80 | 0.15 | 0.22 | 0.32 | 0.32 | 0.14 |
| NXZW | 13 | 45 | 33.15 | 2.02 | 0.19 | 0.22 | 0.58 | 0.57 | 0.31 |
| SDRZ | 16 | 68 | 42.03 | 2.47 | 0.36 | 0.29 | 0.71 | 0.70 | 0.25 |
| SDTA | 12 | 39 | 25.63 | 1.72 | 0.02 | 0.26 | 0.36 | 0.35 | −0.18 |
| TJTJ | 14 | 63 | 40.88 | 2.28 | 0.45 | 0.36 | 0.69 | 0.69 | −0.06 |
Abbreviations: A R, average allelic richness (for 5 specimens); A S, standardized total number of alleles for 5 specimens per sample. H ET, expected heterozygosity; A T, total number of alleles; F IS, inbreeding coefficient; H ES, standardized expected heterozygosity (for 5 specimens); N, Sample size; P AR, private allelic richness (for 5 specimens).
Pairwise F ST among 13 populations of Eucryptorrhynchus brandti (TTW)
| Populations | BJHD | BJHR | BJSY | BJYQ | HBJZ | HNZZ | LNDL | NXLW | NXPL | NXZW | SDRZ | SDTA |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| BJHR | 0.3445 | |||||||||||
| BJSY | 0.6170 | 0.6034 | ||||||||||
| BJYQ | 0.5628 | 0.5456 | 0.5054 | |||||||||
| HBJZ | 0.4981 | 0.4551 | 0.4013 | 0.2560 | ||||||||
| HNZZ | 0.5333 | 0.5186 | 0.3740 | 0.2679 | 0.1276 | |||||||
| LNDL | 0.5972 | 0.5586 | 0.0417 | 0.4989 | 0.3958 | 0.3747 | ||||||
| NXLW | 0.3886 | 0.1114 | 0.6256 | 0.5629 | 0.4671 | 0.5417 | 0.5723 | |||||
| NXPL | 0.0233 | 0.3132 | 0.5463 | 0.5104 | 0.4069 | 0.4483 | 0.5041 | 0.3614 | ||||
| NXZW | 0.2859 | 0.1357 | 0.5563 | 0.5066 | 0.3996 | 0.4669 | 0.5105 | 0.1431 | 0.2666 | |||
| SDRZ | 0.3997 | 0.3745 | 0.3216 | 0.1234 | 0.0197 | 0.1184 | 0.2876 | 0.3918 | 0.3274 | 0.3496 | ||
| SDTA | 0.4532 | 0.0499 | 0.6650 | 0.5969 | 0.5271 | 0.5791 | 0.6173 | 0.0783 | 0.4148 | 0.2052 | 0.4212 | |
| TJTJ | 0.3476 | 0.3616 | 0.2645 | 0.2243 | 0.0820 | 0.1008 | 0.2587 | 0.3936 | 0.2849 | 0.3123 | 0.0658 | 0.4356 |
All values are different significantly.
Parameters of genetic diversity in populations of Eucryptorrhynchus scrobiculatus (TRW)
| Population |
|
|
|
|
|
|
|
|
|
|---|---|---|---|---|---|---|---|---|---|
| BJCY | 5 | 24 | 24.00 | 1.30 | 0.03 | 0.04 | 0.35 | 0.35 | 0.77 |
| BJHD | 13 | 21 | 17.21 | 1.75 | 0.41 | 0.17 | 0.28 | 0.27 | 0.40 |
| BJHR | 13 | 25 | 19.53 | 1.43 | 0.09 | 0.16 | 0.30 | 0.29 | 0.02 |
| BJSY | 10 | 44 | 35.51 | 1.82 | 0.25 | 0.06 | 0.68 | 0.67 | 0.78 |
| LNDL | 7 | 37 | 32.76 | 1.65 | 0.19 | 0.07 | 0.64 | 0.63 | 0.69 |
| NXLW | 12 | 23 | 16.86 | 1.35 | 0.04 | 0.16 | 0.20 | 0.20 | −0.11 |
| NXPL | 13 | 45 | 30.89 | 1.49 | 0.10 | 0.12 | 0.54 | 0.52 | 0.22 |
| NXZW | 13 | 20 | 14.46 | 1.39 | 0.08 | 0.00 | 0.15 | 0.14 | 1.00 |
| SDRZ | 15 | 46 | 31.98 | 1.84 | 0.33 | 0.10 | 0.63 | 0.60 | 0.63 |
| SXYC | 5 | 14 | 14.00 | 1.36 | 0.03 | 0.08 | 0.13 | 0.13 | 0.41 |
| SXYL | 12 | 20 | 16.56 | 1.36 | 0.03 | 0.17 | 0.24 | 0.23 | −0.14 |
Abbreviations: A R, average allelic richness (for 5 specimens); A T, total number of alleles; A S, standardized total number of alleles for 5 specimens per sample; F IS, inbreeding coefficient; H ET, expected heterozygosity; H ES, standardized expected heterozygosity (for 5 specimens); N, Sample size; P AR, private allelic richness (for 5 specimens).
Pairwise F ST among 11 populations of Eucryptorrhynchus scrobiculatus (TRW)
| Population | BJCY | BJHD | BJHR | BJSY | LNDL | NXLW | NXPL | NXZW | SDRZ | SXYC |
|---|---|---|---|---|---|---|---|---|---|---|
| BJHD | 0.5886 | |||||||||
| BJHR | 0.6359 | 0.5803 | ||||||||
| BJSY | 0.2108 | 0.4959 | 0.5167 | |||||||
| LNDL | 0.1069 | 0.5074 | 0.5424 | −0.0724 | ||||||
| NXLW | 0.6462 | 0.6240 | 0.6068 | 0.5121 | 0.5613 | |||||
| NXPL | 0.5125 | 0.5406 | 0.4079 | 0.3910 | 0.3963 | 0.4482 | ||||
| NXZW | 0.7476 | 0.6034 | 0.5333 | 0.6629 | 0.7035 | 0.6551 | 0.6732 | |||
| SDRZ | 0.1713 | 0.5189 | 0.5020 | 0.0262 | −0.0442 | 0.5082 | 0.3697 | 0.6723 | ||
| SXYC | 0.1927 | 0.5864 | 0.6789 | 0.2406 | 0.2261 | 0.6783 | 0.5620 | 0.7548 | 0.3196 | |
| SXYL | 0.6681 | 0.6234 | 0.6176 | 0.5073 | 0.5677 | −0.0127 | 0.4637 | 0.6639 | 0.5179 | 0.6845 |
All values are different significantly.
FIGURE 2Genetic structure of Eucryptorrhynchus brandti (TTW) and E. scrobiculatus (TRW) populations. (a) Genetic structure inferred from STRUCTURE with k = 2, 3, 4. Genetic structure of TTW (b) and TRW (c) populations based on 10 markers using DAPC. Codes for the populations are shown in Figure 1
FIGURE 3Recent gene flow among populations of Eucryptorrhynchus brandti (TTW) (a) and E. scrobiculatus (TRW) (b) inferred from BAYESASS. Migration rate (M value) of TTW ranges from 0.0100–0.8782; migration rate of TRW ranges from 0.0128–0.8710
FIGURE 4RDA analysis on genetic variance of Eucryptorrhynchus brandti (TTW) and E. scrobiculatus (TRW) explained by the environmental effects of climate and geography. A full RDA model was run by considering environmental and geographic effects simultaneously (a, TTW; c, TRW), and a partial RDA model was run by constraining geographic effects to analyze the correlation of environmental variables (b, TTW; d, TRW). Individuals from the same population are indicated by circles with the same color. PCNM1‐2, geographic variables; the highest temperature of the warmest month (bio5), Min temperature of coldest month (bio6), temperature annual range (bio7), precipitation of wettest month (bio13), precipitation of driest month (bio14), precipitation seasonality (coefficient of variation) (bio15) and precipitation of wettest quarter (bio16), climate variables. Correlations of each variable are indicated by an arrow. Long arrows indicate a high correlation between the variable and genetic distance