Literature DB >> 35414328

Expression status and prognostic value of autophagy-related lncRNAs in prostate cancer.

Guo Chen1, Xiaoping Qin1, Yu Wang2, Biyun Gao1, Muan Ling1, Wenjun Yin1, Yutong Li1, Bin Pan1.   

Abstract

LncRNAs involve in the autophagy to regulate prostate cancer (PCA) initiation and progression. Therefore, it urges to explore more significant AR-lncRNAs in PCa. mRNA data and clinical information of PCa were achieved from TCGA database, and ARGs were obtained from the HADb. AR-lncRNAs were identified by correlation analysis of DE ARGs and lncRNAs. Univariate Cox regression, LASSO regression, and multivariate Cox regression were used to identify the prognostic AR-lncRNA signature and constructed a risk model. GESA was used to biological function analysis between high- and low-risk score group. A nomogram was constructed and used to predicate the survival of PCa patients. A calibration curve was used to determine the accuracy of the predication model. AR-related ceRNA network was constructed by correlation analysis. Expression of six AR-related lncRNAs were detected by qRT-PCR. 222 ARGs and 385 AR-lncRNAs were screened from PCa and normal tissues, and 17 AR-lncRNAs were identified as prognostic signature for PCa. Based on the expression of prognostic signature, a risk score was calculated, and PCa samples were distributed into high- and low-risk score groups. The biological function and predicated value of the prognostic signature were also examined. Finally, based on the correlation between each ARG and its prognostic signature, three modules of AR-lncRNA-miRNA-mRNA regulatory networks were constructed based on 6 AR-lncRNAs, 17 miRNAs, and 12 ARGs. And we found that AC012085.2, UBXN10-AS1, LINC00261 downregulated, whereas AP004608.1, AC104667.2, AC008610.1 upregulated in PCa compared with BPH tissues. Our finding supplied the potential AR-lncRNAs prognostic signature for PCa.

Entities:  

Keywords:  Prostate cancer; autophagy-related long non-coding RNAs; competing endogenous RNA network; prognosis

Mesh:

Substances:

Year:  2022        PMID: 35414328      PMCID: PMC9302510          DOI: 10.1080/15384101.2022.2065149

Source DB:  PubMed          Journal:  Cell Cycle        ISSN: 1551-4005            Impact factor:   5.173


  36 in total

Review 1.  The emergence of noncoding RNAs as Heracles in autophagy.

Authors:  Jian Zhang; Peiyuan Wang; Lin Wan; Shouping Xu; Da Pang
Journal:  Autophagy       Date:  2017-04-25       Impact factor: 16.016

Review 2.  Autophagy and metabolism.

Authors:  Joshua D Rabinowitz; Eileen White
Journal:  Science       Date:  2010-12-03       Impact factor: 47.728

3.  Small interfering RNA target for long noncoding RNA PCGEM1 increases the sensitivity of LNCaP cells to baicalein.

Authors:  Zeping Han; Jinhua He; Maoxian Zou; Weiming Chen; Yubing Lv; Yuguang Li
Journal:  Anat Rec (Hoboken)       Date:  2020-07-02       Impact factor: 2.064

Review 4.  Long non-coding RNAs and enhancers.

Authors:  Ulf Andersson Ørom; Ramin Shiekhattar
Journal:  Curr Opin Genet Dev       Date:  2011-02-15       Impact factor: 5.578

5.  Long noncoding RNA LINC00261 suppresses prostate cancer tumorigenesis through upregulation of GATA6-mediated DKK3.

Authors:  Yang Li; Hai Li; Xin Wei
Journal:  Cancer Cell Int       Date:  2020-09-30       Impact factor: 5.722

6.  Increased expression of lncRNA CASC9 promotes tumor progression by suppressing autophagy-mediated cell apoptosis via the AKT/mTOR pathway in oral squamous cell carcinoma.

Authors:  Yixin Yang; Dan Chen; Huan Liu; Kai Yang
Journal:  Cell Death Dis       Date:  2019-01-17       Impact factor: 8.469

Review 7.  Genetics and biology of prostate cancer.

Authors:  Guocan Wang; Di Zhao; Denise J Spring; Ronald A DePinho
Journal:  Genes Dev       Date:  2018-09-01       Impact factor: 11.361

8.  Endothelial cells promote metastasis of prostate cancer by enhancing autophagy.

Authors:  Ruizhe Zhao; Xiaoyu Bei; Boyu Yang; Xiaohai Wang; Chenyi Jiang; Fei Shi; Xingjie Wang; Yiping Zhu; Yifeng Jing; Bangmin Han; Shujie Xia; Qi Jiang
Journal:  J Exp Clin Cancer Res       Date:  2018-09-10

9.  Dual role of autophagy on docetaxel-sensitivity in prostate cancer cells.

Authors:  Riccardo Cristofani; Marina Montagnani Marelli; Maria Elena Cicardi; Fabrizio Fontana; Monica Marzagalli; Patrizia Limonta; Angelo Poletti; Roberta Manuela Moretti
Journal:  Cell Death Dis       Date:  2018-08-30       Impact factor: 8.469

Review 10.  Autophagic and Apoptotic Pathways as Targets for Chemotherapy in Glioblastoma.

Authors:  Cristina Trejo-Solís; Norma Serrano-Garcia; Ángel Escamilla-Ramírez; Rosa A Castillo-Rodríguez; Dolores Jimenez-Farfan; Guadalupe Palencia; Minerva Calvillo; Mayra A Alvarez-Lemus; Athenea Flores-Nájera; Arturo Cruz-Salgado; Julio Sotelo
Journal:  Int J Mol Sci       Date:  2018-11-27       Impact factor: 5.923

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  2 in total

1.  Mutator-Derived lncRNA Landscape: A Novel Insight Into the Genomic Instability of Prostate Cancer.

Authors:  Liansha Tang; Wanjiang Li; Hang Xu; Xiaonan Zheng; Shi Qiu; Wenbo He; Qiang Wei; Jianzhong Ai; Lu Yang; Jiyan Liu
Journal:  Front Oncol       Date:  2022-07-04       Impact factor: 5.738

2.  Prognostic significance of lncRNA AP004608.1 in prostate cancer.

Authors:  Wei Li; Runze Zhou; Bo Sun; Xin Jin; Yuan Chen; Xuefen Xu
Journal:  Front Oncol       Date:  2022-09-29       Impact factor: 5.738

  2 in total

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