Literature DB >> 35406962

Calypogeia (Calypogeiaceae, Marchantiophyta) in Pacific Asia: Updates from Molecular Revision with Particular Attention to the Genus in North Indochina.

Vadim A Bakalin1, Yulia D Maltseva1, Frank Müller2, Ksenia G Klimova1, Van Sinh Nguyen3, Seung Se Choi4, Aleksey V Troitsky5.   

Abstract

Calypogeia is a genus in Pacific Asia that is difficult to classify taxonomically. These difficulties arise from (1) considering the presence of oil bodies as anatomical characters for taxonomic differentiation, (2) the wide occurrence of sibling, semicryptic and geographical vicariant taxa and (3) the inevitable need to organize new datasets for molecular genetic revision of the genus. The present study uses an integrative approach, including molecular genetic, morphological, chorological and ecological methods, to understand the taxonomy of the genus in Amphi-Pacific Asia. As a result, a set of new-to-science taxa was revealed, and the suite of morphological features necessary for reliable discrimination of the taxa was revised. These results are based on the study of a large set of 'fresh' collections suitable for molecular analysis and morphological comparison and include data on oil bodies. The most basal branch in Calypogeia s.l. is segregated into a new genus, Asperifolia. Descriptions of the new taxa and the key to Calypogeia in Vietnam are provided.

Entities:  

Keywords:  Calypogeiaceae; Hepaticae; geographic vicariants; liverworts; phylogeny; speciation; taxonomy

Year:  2022        PMID: 35406962      PMCID: PMC9002642          DOI: 10.3390/plants11070983

Source DB:  PubMed          Journal:  Plants (Basel)        ISSN: 2223-7747


  10 in total

1.  Universal primers for amplification of three non-coding regions of chloroplast DNA.

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Authors:  I A Miliutina; D V Goriunov; M S Ignatov; E A Ignatova; A V Troitskiĭ
Journal:  Mol Biol (Mosk)       Date:  2010 Nov-Dec

3.  ASAP: assemble species by automatic partitioning.

Authors:  Nicolas Puillandre; Sophie Brouillet; Guillaume Achaz
Journal:  Mol Ecol Resour       Date:  2020-11-20       Impact factor: 7.090

4.  MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms.

Authors:  Sudhir Kumar; Glen Stecher; Michael Li; Christina Knyaz; Koichiro Tamura
Journal:  Mol Biol Evol       Date:  2018-06-01       Impact factor: 16.240

5.  Integrating continental mainland and islands in temperate East Asia: liverworts and hornworts of the Korean Peninsula.

Authors:  Seung Se Choi; Vadim Bakalin; Seung Jin Park
Journal:  PhytoKeys       Date:  2021-04-20       Impact factor: 1.635

6.  MAFFT multiple sequence alignment software version 7: improvements in performance and usability.

Authors:  Kazutaka Katoh; Daron M Standley
Journal:  Mol Biol Evol       Date:  2013-01-16       Impact factor: 16.240

7.  MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space.

Authors:  Fredrik Ronquist; Maxim Teslenko; Paul van der Mark; Daniel L Ayres; Aaron Darling; Sebastian Höhna; Bret Larget; Liang Liu; Marc A Suchard; John P Huelsenbeck
Journal:  Syst Biol       Date:  2012-02-22       Impact factor: 15.683

8.  IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies.

Authors:  Lam-Tung Nguyen; Heiko A Schmidt; Arndt von Haeseler; Bui Quang Minh
Journal:  Mol Biol Evol       Date:  2014-11-03       Impact factor: 16.240

9.  Does Calypogeia azurea (Calypogeiaceae, Marchantiophyta) occur outside Europe? Molecular and morphological evidence.

Authors:  Katarzyna Buczkowska; Vadim Bakalin; Alina Bączkiewicz; Blanka Aguero; Patrycja Gonera; Monika Ślipiko; Monika Szczecińska; Jakub Sawicki
Journal:  PLoS One       Date:  2018-10-10       Impact factor: 3.240

  10 in total
  1 in total

1.  The Taxonomically Richest Liverwort Hemiboreal Flora in Eurasia Is in the South Kurils.

Authors:  Vadim A Bakalin; Ksenia G Klimova; Daniil A Bakalin; Seung Se Choi
Journal:  Plants (Basel)       Date:  2022-08-25
  1 in total

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