Literature DB >> 35403173

Surface-Guided Image Fusion for Preserving Cortical Details in Human Brain Templates.

Sahar Ahmad1, Ye Wu1, Pew-Thian Yap1.   

Abstract

Human brain templates are a basis for comparison of brain features across individuals. They should ideally capture an atomical details at both coarse and fine scales to facilitate comparison at varying granularity. Brain template construction typically involves spatial normalization and image fusion. While significant efforts have been dedicated to improving brain templates with sophisticated spatial normalization algorithms, image fusion is typically carried out using intensity-based averaging, causing blurring of anatomical structures. Here, we present an image fusion method that exploits cortical surfaces as guidance to help preserve details in brain templates. Our method encodes cortical boundary information given by a cortical surface mesh in a signed distance function (SDF) map. We use the SDF map to help determine localized contributions of the individual images, especially at cortical boundaries, in image fusion. Experimental results demonstrate that our method significantly improves the preservation of fine gyral and sulcal details, resulting in detailed brain templates with good surface-volume agreement.

Entities:  

Keywords:  Brain templates; Cortical surface; Image fusion

Year:  2021        PMID: 35403173      PMCID: PMC8986340     

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  18 in total

Review 1.  Brain templates and atlases.

Authors:  Alan C Evans; Andrew L Janke; D Louis Collins; Sylvain Baillet
Journal:  Neuroimage       Date:  2012-01-10       Impact factor: 6.556

2.  Intensity and sulci landmark combined brain atlas construction for Chinese pediatric population.

Authors:  Yishan Luo; Lin Shi; Jian Weng; Hongjian He; Winnie C W Chu; Feiyan Chen; Defeng Wang
Journal:  Hum Brain Mapp       Date:  2014-01-17       Impact factor: 5.038

Review 3.  FreeSurfer.

Authors:  Bruce Fischl
Journal:  Neuroimage       Date:  2012-01-10       Impact factor: 6.556

4.  Detail-preserving construction of neonatal brain atlases in space-frequency domain.

Authors:  Yuyao Zhang; Feng Shi; Pew-Thian Yap; Dinggang Shen
Journal:  Hum Brain Mapp       Date:  2016-03-14       Impact factor: 5.038

5.  The optimal template effect in hippocampus studies of diseased populations.

Authors:  Brian B Avants; Paul Yushkevich; John Pluta; David Minkoff; Marc Korczykowski; John Detre; James C Gee
Journal:  Neuroimage       Date:  2009-10-08       Impact factor: 6.556

Review 6.  FSL.

Authors:  Mark Jenkinson; Christian F Beckmann; Timothy E J Behrens; Mark W Woolrich; Stephen M Smith
Journal:  Neuroimage       Date:  2011-09-16       Impact factor: 6.556

7.  Shaping brain structure: Genetic and phylogenetic axes of macroscale organization of cortical thickness.

Authors:  Sofie L Valk; Ting Xu; Daniel S Margulies; Shahrzad Kharabian Masouleh; Casey Paquola; Alexandros Goulas; Peter Kochunov; Jonathan Smallwood; B T Thomas Yeo; Boris C Bernhardt; Simon B Eickhoff
Journal:  Sci Adv       Date:  2020-09-25       Impact factor: 14.957

8.  Structure-Function Connectomics Reveals Aberrant Developmental Trajectory Occurring at Preadolescence in the Autistic Brain.

Authors:  Changchun He; Huafu Chen; Lucina Q Uddin; Asier Erramuzpe; Paolo Bonifazi; Xiaonan Guo; Jinming Xiao; Heng Chen; Xinyue Huang; Lei Li; Wei Sheng; Wei Liao; Jesus M Cortes; Xujun Duan
Journal:  Cereb Cortex       Date:  2020-07-30       Impact factor: 5.357

9.  Regional growth and atlasing of the developing human brain.

Authors:  Antonios Makropoulos; Paul Aljabar; Robert Wright; Britta Hüning; Nazakat Merchant; Tomoki Arichi; Nora Tusor; Joseph V Hajnal; A David Edwards; Serena J Counsell; Daniel Rueckert
Journal:  Neuroimage       Date:  2015-10-21       Impact factor: 6.556

10.  The minimal preprocessing pipelines for the Human Connectome Project.

Authors:  Matthew F Glasser; Stamatios N Sotiropoulos; J Anthony Wilson; Timothy S Coalson; Bruce Fischl; Jesper L Andersson; Junqian Xu; Saad Jbabdi; Matthew Webster; Jonathan R Polimeni; David C Van Essen; Mark Jenkinson
Journal:  Neuroimage       Date:  2013-05-11       Impact factor: 6.556

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