Literature DB >> 35394600

Genetic diversity and relationships among Nopalea sp. and Opuntia spp. accessions revealed by RAPD, ISSR and ITS molecular markers.

Janieire Dorlamis Cordeiro Bezerra1, Alberício Pereira de Andrade2, Mailson Monteiro do Rêgo3, Divan Soares da Silva1, José Ribamar Silva do Nascimento Júnior1, Fernando Dos Santos Araújo4, Roberta de Lima Valença2, Elizanilda Ramalho do Rêgo5, Angela Maria Dos Santos Pessoa6, Riselane de Lucena Alcântara Bruno3, Ariosvaldo Nunes de Medeiros1.   

Abstract

BACKGROUND: Dactylopius opuntiae (Cockerell) (carmine cochineal) is an insect pest highly noxious that has spread through cactus pear crops in the Brazilian semiarid region. Knowledge of diversity and genetic relationships of the cactus pear accessions is fundamental to create new varieties resistance to carmine cochineal. Therefore, this investigation was undertaken to assess the genetic diversity and genetic relationships that existed among cactus pear accessions of Nopalea sp. and Opuntia spp. with contrasting resistance to D. opuntiae. METHODS AND
RESULTS: We conducted a molecular analysis in seven cactus pear accessions from the "reference collection" of the Agronomic Institute of Pernambuco, Brazil using RAPD, ISSR and ITS molecular markers. A total of 242 bands were detected from 26 polymorphic primers. The high percentage of polymorphism by RAPD (89.8%), ISSR (81.2%) and ITS (75%) markers suggests that the cactus pear accessions have high genetic diversity. The combined analysis of markers systems enabled the accessions discrimination of about the genus and ploidy, but were incongruous in relation to resistance level to D. opuntiae.
CONCLUSIONS: Genetic diversity, discrimination of about the genus and ploidy was confirmed by merging information from ISSR, RAPD and ITS markers systems. The IPA-200016, IPA-200149, IPA-100004, IPA-200205 accessions are genetically divergent, therefore could be potentially incorporated into any further breeding programs directed to create new varieties of cactus pear resistant to D. opuntiae.
© 2022. The Author(s), under exclusive licence to Springer Nature B.V.

Entities:  

Keywords:  Cactus pear; Carmine cochineal; Plant breeding; Semi-arid

Mesh:

Substances:

Year:  2022        PMID: 35394600     DOI: 10.1007/s11033-022-07416-y

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.742


  4 in total

1.  Phylogeny of Opuntia s.s. (Cactaceae): clade delineation, geographic origins, and reticulate evolution.

Authors:  Lucas C Majure; Raul Puente; M Patrick Griffith; Walter S Judd; Pamela S Soltis; Douglas E Soltis
Journal:  Am J Bot       Date:  2012-04-26       Impact factor: 3.844

2.  Determination of the Genetic Relationships Among Salvia Species by RAPD and ISSR Analyses.

Authors:  Serap Sunar; Mustafa Korkmaz; Burcu SiĞmaz; Güleray AĞar
Journal:  Turk J Pharm Sci       Date:  2020-10-30

3.  Multiple DNA marker-assisted diversity analysis of Indian mango (Mangifera indica L.) populations.

Authors:  Ram Chandra Jena; Pradeep Kumar Chand
Journal:  Sci Rep       Date:  2021-05-14       Impact factor: 4.379

4.  Comparison of RAPD, ISSR, and AFLP Molecular Markers to Reveal and Classify Orchardgrass (Dactylis glomerata L.) Germplasm Variations.

Authors:  Rita Costa; Graça Pereira; Inmaculada Garrido; Manuel María Tavares-de-Sousa; Francisco Espinosa
Journal:  PLoS One       Date:  2016-04-12       Impact factor: 3.240

  4 in total

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