| Literature DB >> 35392024 |
Yaling Wang1,2, Ben Wang1,2, Yingxue Huang1, Yangfan Li1,2, Sha Yan1, Hongfu Xie1,2,3, Yiya Zhang1,2,3, Ji Li1,2,3.
Abstract
Objective: Rosacea is a chronic inflammatory skin disease with high morbidity. Previous studies have described the contribution of skin barrier dysfunction (SBD) in the progression of rosacea, but the specific mechanism remains unclear. In this study, we aim to investigate the key genes that may involve SBD-mediated rosacea aggravation.Entities:
Keywords: STAT3; WGCNA; immune; rosacea; skin barrier
Year: 2022 PMID: 35392024 PMCID: PMC8980297 DOI: 10.2147/JIR.S356551
Source DB: PubMed Journal: J Inflamm Res ISSN: 1178-7031
The Primers of Genes for qPCR
| Target Genes | Forward Primers | Reverse Primers |
|---|---|---|
| GAPDH | AGGTCGGTGTGAACGGATTTG | TGTAGACCATGTAGTTGAGGTCA |
| STAT3 | CAATACCATTGACCTGCCGAT | GAGCGACTCAAACTGCCCT |
| IL-6 | TAGTCCTTCCTACCCCAATTTCC | TTGGTCCTTAGCCACTCCTTC |
| IL-1β | GCAACTGTTCCTGAACTCAACT | ATCTTTTGGGGTCCGTCAACT |
| TNFα | CTGAACTTCGGGGTGATCGG | GGCTTGTCACTCGAATTTTGAGA |
| CCR5 | TTTTCAAGGGTCAGTTCCGAC | GGAAGACCATCATGTTACCCAC |
| CXCL10 | CCAAGTGCTGCCGTCATTTTC | GGCTCGCAGGGATGATTTCAA |
Figure 1SBRGs expression in rosacea. The volcano plot (A) the heatmap (B) and the violin plot (C) of SBRGs in rosacea.
Figure 2The consensus Cluster analysis basing on SBRGs. (A) Three distinct clusters were eventually identified using cluster analysis. (B) The PCA analysis of 3 clusters. (C) The heatmap of SBRGs in 3 clusters.
Figure 3SBD patterns-related signal pathway in rosacea. (A) The differently expressed genes between moderate- and high-SBD pattern in rosacea. (B) The heatmap of upregulated DEGs and (C) The heatmap of downregulated DEGs in high-SBD group compared to moderate-SBD group. (D) The GO and KEGG analysis of upregulated DEGs. (E) GO and KEGG analysis of downregulated DEGs. (F) The GSEA analysis of genes from moderate- and high-SBD pattern in rosacea. (G) The GSVA analysis revealed the different pathways in high- SBD pattern compared to moderate-SBD pattern in rosacea.
Figure 4The immune cell infiltration in rosacea.
Figure 5WGCNA analysis. (A) Sample clustering associated with clinical characters. (B) The cluster of WGCNA. (C) The relationships between modules and clinical characters. (D) The relationship between GS and MM in the lightgreen, blue and greenyellow modules. (E) GO and KEGG analysis of genes from lightgreen module. (F) The PPI network analysis revealed the hub genes in lightgreen module. (G) MODE analysis revealed JAK-STAT signal pathway was a key subnetwork.
Figure 6STAT3-related to immune infiltration in rosacea. (A) The immune infiltration in STAT3 high/low-expression group. (B) The relationship between STAT3 expression and immune cell infiltration. (C) The immune infiltration in STAT3 signal high/low group. (D) The relationship between STAT3 signal and immune cell infiltration. (E) The relationship between STAT3 and the genes in cytokine/chemokine-related signal pathways and T cell receptor-related signal pathways. Data represent the means ± SD, *P < 0.05, **P < 0.01, ***P < 0.001 and ****P < 0.0001.
Figure 7Increased STAT3 expression in rosacea. (A) IHC analyzed the expression of STAT3 in rosacea. (B) The epidermis RNA-Seq data of rosacea. (C) The significant correlation between STAT3 and SBRGs. (D) The significant correlation between STAT3 and cytokine/chemokine genes. Data represent the means ± SD, *P < 0.05, **P < 0.01 and ***P < 0.001.
Figure 8STAT3 expression and CD4+ T cell infiltration in skin barrier damage model. BALB/c mice received tape-stripping treatment every 12 hours for a total of 4 times. (A) The TEWL of control and SBD mice. (B) The STAT3 mRNA expression in the whole skin sample. (C) The mRNA expression of CCR5, CXCL10, IL-1β, IL-6 and TNF-α in the whole skin sample. BALB/c mice were treated with tape-stripping combined with LL37. (D) The erythema and the thickness of dorsal skin. (E), The STAT3 expression in control skin and LL37-induced rosacea-like skin lesion. (F) CD4+ T cell infiltration in control skin and LL37-induced rosacea-like skin lesion. Data represent the means ± SD, *P < 0.05, **P < 0.01, ***P < 0.001 and ***P < 0.001.