| Literature DB >> 35372222 |
Surbhi Bhatia1, Shadab Alam2, Mohammed Shuaib2, Mohammed Hameed Alhameed2, Fathe Jeribi2, Razan Ibrahim Alsuwailem1.
Abstract
Early detection of vessels from fundus images can effectively prevent the permanent retinal damages caused by retinopathies such as glaucoma, hyperextension, and diabetes. Concerning the red color of both retinal vessels and background and the vessel's morphological variations, the current vessel detection methodologies fail to segment thin vessels and discriminate them in the regions where permanent retinopathies mainly occur. This research aims to suggest a novel approach to take the benefit of both traditional template-matching methods with recent deep learning (DL) solutions. These two methods are combined in which the response of a Cauchy matched filter is used to replace the noisy red channel of the fundus images. Consequently, a U-shaped fully connected convolutional neural network (U-net) is employed to train end-to-end segmentation of pixels into vessel and background classes. Each preprocessed image is divided into several patches to provide enough training images and speed up the training per each instance. The DRIVE public database has been analyzed to test the proposed method, and metrics such as Accuracy, Precision, Sensitivity and Specificity have been measured for evaluation. The evaluation indicates that the average extraction accuracy of the proposed model is 0.9640 on the employed dataset.Entities:
Keywords: Cauchy distribution; U-Net; multichannel; retinal vessels; retinopathy
Mesh:
Year: 2022 PMID: 35372222 PMCID: PMC8968759 DOI: 10.3389/fpubh.2022.858327
Source DB: PubMed Journal: Front Public Health ISSN: 2296-2565
Figure 1(A) Retinal vessel cross-section (A to B), (B) intensities of the cross-section, and (C) fitted Gaussian curve proposed by Chaudhury et al. (9).
Figure 2Comparison of the Gaussian and the Cauchy curves for generating a template for retinal vessels [The image is adapted from (34)].
Related works.
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| ( | Unsupervised hierarchical feature learning and ensemble | Suggested using an ensemble of stacked denoising autoencoders. Subsequently, the final decision was made |
| ( | Deep CNN and nearest neighbor search | Suggested the employment of CNN to extract binary masks followed by a generalized particle filtering technique for vascular structure identification from medical images aiming at retinal vessel tree extraction |
| ( | Conditional Random Field (CRF), multi-level CNN | Carried out the vessel detection by Conditional Random Field (CRF) developed based on a multi-level CNN model. |
| ( | Cauchy PDF and Gaussian function | Showed that the Cauchy probability distribution function (PDF) could be a model cross-section of vessels more accurate than the Gaussian. |
| ( | Gaussian matched filter with U-Net | To use Gaussian matched filter in the preprocessing stage with U-Net CNN, aiming to improve the detection of vessels. |
| ( | Y-net | Presented a Residual Y-net design for retinal vessel detection inspired by U-net that help in Diabetic detection. |
| ( | U-Net | A review of U-Net and its variant techniques for image segmentation and specifically highlight their applications in retinal fundus image segmentation. |
| ( | Multiscale matched filter, U-Net | Proposes a model that combines a multiscale matched filter with a U-Net that has been tested on various available public datasets. |
| ( | Multiscale, texture feature-based, Segmentation-based, CNN, Ensemble Learning approaches | Describe different types of ML models for glaucoma detection from fundus images like multiscale, texture feature-based, Segmentation-based, CNN, Ensemble Learning approaches in detail. |
| ( | Dense U-net | Proposed a structure using Dense U-net and the patch-based learning approach for clinical applications. |
Figure 3(A) Original fundus image and (B) Cauchy matched filter response.
Figure 4Image preparation pipeline, from original Fundus image to feature map patches.
Figure 5U-net structure implemented in this investigation.
Figure 6The result of the detection: (A) Original fundus image; (B) a thin vessel; (C) the corresponding ground truth map which does not contain the vessel; (D) the thin vessel being detected by the proposed model. The red color square box part in (A) has been reflected by respective identified image in (C) by proposed map. Similarly the red square part reflected in (B) has been identified by red square box part in image (D).
Figure 7Confusion matrix of the evaluation results.
Assessment of the obtained results with contemporary approaches.
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| Fraz et al. ( | 0.9422 | 0.7302 | 0.9742 | 0.9600 | 0.9502 |
| Nicola et al. ( | 0.9467 | 0.7731 | 0.9724 | NA | 0.9588 |
| Lahiri et al. ( | 0.9480 | 0.7500 | 0.9800 | NA | 0.9500 |
| Melinscak et al. ( | 0.9466 | 0.7276 | 0.9785 | NA | 0.9749 |
| Fu et al. ( | 0.9470 | 0.7294 | NA | NA | 0.9523 |
| Gao et al. ( | 0.9636 | 0.7802 | 0.7802 | 0.8948 | 0.9771 |
| Mou et al. ( | 0.9607 | 0.8132 | 0.9783 | NA | 0.9796 |
| Fan et al. ( | 0.9664 | 0.8374 | 0.9790 | NA | 0.9835 |
| Wang et al. ( | 0.9511 | 0.7986 | 0.9736 | NA | 0.9740 |
| Saroj et al. ( | 0.9509 | 0.7278 | 0.9724 | NA | 0.8501 |
| Proposed method |
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Figure 8The comparison of ROC curves for retinal vessel detection methods.