| Literature DB >> 35370461 |
Yilin Xie1, Juanjuan Tan2, Yingchun Qin3, Yong Cao4, Yicheng Wang4, Aihua Li5, Zhaoxia Wang6, Zhongdong Qiao4, Zhiqiang Yan7.
Abstract
Background and aims: The miRNA-based post-transcription modification has been extensively studied in hypertension. It however remains elusive how miRNA expression is regulated in this pathological process. We hypothesize that hydroxymethylation in the promoter regions tightly controls the levels of key miRNAs, which in turn affects the development of hypertension.Entities:
Keywords: Claudin-1; DNA hydroxymethylation; Hypertension; Vascular smooth muscle cell; miR-3571
Mesh:
Substances:
Year: 2022 PMID: 35370461 PMCID: PMC8964332 DOI: 10.7150/ijms.64639
Source DB: PubMed Journal: Int J Med Sci ISSN: 1449-1907 Impact factor: 3.642
The sequence of miR-3571 antagomir and CLDN1 siRNA
| Name | 5'-3' sequence | 3'-5' sequence |
|---|---|---|
| miR-3571 antagomir | UAUGGAAUGUAAAGAAGUGUGUA | |
| CCAGAGCCUUGAUGGUAAUTT | AUUACCAUCAAGGCUCUGGTT |
Specific primer sequences for Glucosylation-Coupled Methylation-Sensitivity qPCR
| Name | Sequences,5'-3' | Tm(℃) |
|---|---|---|
| 5-hmc-mir-3571-F | GGAATAGGGCTGTTAG | 48 |
| 5-hmc-mir-3571-R | GTAATGTCCGCCAAGA | 48 |
Gene-specific primer sequences for RT-qPCR.
| Name | Primers sequences, 5'-3' | Tm(℃) |
|---|---|---|
| MMP2 | F CTGGGTTTACCCCCTGATGTCC | 61.85 |
| MMP9 | F GGGACGCAGACATCGTCATC | 58.65 |
| GAPDH | F AGCTTCCCATTCTCAGCCTTGACT | 60.4 |
| CLDN1 | F AGGCAACCAGAGCCTTGATGGTAA | 60.80 |
| OLR1 | F GCTATCCTTTCTTGGGTGTAAAAC | 53.57 |
| miR-3571-RT | GTCGTATCCAGTGCAGGGTCCGAGGTATTCGCACTGGATACGACTATGGA | 72.65 |
| U6-RT | GTCGTATCCAGTGCAGGGTCCGAGGTATTCGCACTGGATACGACAAAATA | 73.4 |
| miR-3571-F | CGCGCGTACACACTTCTTTACAT | 57.81 |
| U6-F | AGAGAAGATTAGCATGGCCCCTG | 60.2 |
| All-R | AGTGCAGGGTCCGAGGTAT | 62 |
The primer sequences of CLDN1 3'UTR-WT and CLDN1 3'UTR-MUT
| Name | Sequences,5'-3' |
|---|---|
| CLDN1 3'UTR-WT | Forward AACGAGCTCGCTAGCCTCGAGGGGTGCTCCTTAAGTGTGTA |
| CLDN1 3'UTR-MUT | Forward AACGAGCTCGCTAGCCTCGAGGGGTGCTCCTTACTCTGAGC |
The miRNAs whose hydroxymethylated regions displayed significant differential expression in SHRs compared with WKYs.
| RefSeq_name | GeneSymbol | chr | tss | tts | strand | Genomic_position |
|---|---|---|---|---|---|---|
| NR_037349 | Mir3065 | chr10 | 108793392 | 108793495 | + | chr10:108794261-108794460 |
| NR_031783 | Mir338 | chr10 | 108793475 | 108793409 | - | chr10:108794261-108794460 |
| NR_037360 | Mir3571 | chr18 | 2087900 | 2088011 | + | chr18:2087581-2087800 |
| NR_032116 | Mir1 | chr18 | 2087998 | 2087911 | - | chr18:2087581-2087800 |
| NR_031777 | Mir330 | chr1 | 81358759 | 81358856 | + | chr1:81357121-81357320 |
RefSeq_name: Refseq accession number of the differentially hydroxymethylated region associated gene.
Symbol: Gene symbol of the differentially hydroxymethylated region associated gene.
Chr: The chromosome of the differentially hydroxymethylated region associated gene.
TSS: The start sites of the differentially hydroxymethylated region associated gene.
TTS: The end sites of the differentially hydroxymethylated region associated gene.
Strand: The strand of the differentially hydroxymethylated region associated gene.
Genomic_position: Chr, Start and End of the differentially hydroxymethylated region.
Figure 1MiR-3571 expression was lower in the aortas of SHRs than in WKYs while levels of hydroxymethylation in the miR-3571 promoter region of the aortas of SHRs were lower than those of WKYs. A. The levels of hydroxymethylation in the miR-3571 promoter region of the aortas of SHRs and WKYs were measured by Glucosylation-Coupled Hydroxymethylation-Sensitivity qPCR. B. Expression of miR-3571 in the aortas of SHRs and WKYs were measured by RTqPCR. * p < 0.05 versus WKYs. C. Expression of miR-3571 in VSMCs subjected to 5% or 15% CS for 12h or 24h were measured by RT-qPCR. * p < 0.05 versus 5% CS. Data represent means ± SD of at least three separate experiments. Statistical comparisons were conducted using a Student's t test.
Figure 2CLDN1 is a downstream target of miR3571. A. Predicted target binding region between miR3571, and CLDN1 and OLR1. B. Expression of miR3571 after transfection with miR3571 mimic or miR-3571 NC was measured by RTqPCR. *p < 0.05 versus miR-3571 NC. C. Expression of CLDN1 and OLR1 were measured by RTqPCR. *p < 0.05 versus miR-3571 NC. No significance (N.S.) p>0.05 versus miR-3571 NC. D. Relative luciferase activity were measured with a luciferase reporter assay. *p < 0.05 versus CLDN1 3'UTR-WT. E. Expression of CLDN1 in the aortas of SHRs and WKYs were measured by RTqPCR and Western blotting. *p < 0.05 versus WKYs. F. Expression of Claudin 1 in VSMCs subjected to 5% or 15% CS for 12h and 24h were measured by Western blot analysis. *p < 0.05 versus 5% CS. Data represent means ± SD and at least three separate experiments. Statistical comparisons were conducted using a Student's t test.
Figure 3MiR3571 overexpression inhibited proliferation of VSMCs. A. Proliferation of VSMCs was assessed by EdU assay and cell proliferation quantification. *p < 0.05 versus LV-NC. B. Proliferation of VSMCs was assessed by CCK8 assay. *p < 0.05 versus LV-NC. C. Expression of PCNA and p27 were measured by Western blot analysis. *p < 0.05 versus LV-NC. Data represent means ± SD in three separate experiments. Significance was determined by oneway ANOVA with Tukey's multiple comparisons test.
Figure 4MiR3571 overexpression affected cell cycle of VSMCs. A. Representative DNA histograms of propidium iodide fluorescence in cells, as assessed by flow cytometry. B. Percentage of cells in the S phase of the cell cycle was quantified by flow cytometric analysis. C. Expression of cyclin D1 and E1 were measured by Western blot analysis. *p< 0.05 versus LV-NC.
Figure 5MiR3571 overexpression inhibited migration of VSMCs. A. Migration of VSMCs was assessed by wound healing assay. B. Cell migration rate quantification. *p < 0.05 versus LV-NC. C. mRNA and protein expression levels of MMP2 and MMP9 were measured by RT-qPCR and Western blot analysis. *p < 0.05 versus LV-NC. Data represent means ± SD in three separate experiments. Significance was determined by oneway ANOVA with Tukey's multiple comparisons test.
Figure 6MiR-3571 overexpression inhibited the transformation of VSMCs from a contractile to proliferating phenotype. The expression of three contractile protein, SM22, ACTA2 and calponin, were measured by Western blot analysis. *p < 0.05 versus LV-NC. Data represent means ± SD in three separate experiments. Significance was determined by oneway ANOVA with Tukey's multiple comparisons test.
Figure 7CLDN1 overexpression activated ERK1/2. A and B. Protein expression levels of total ERK and p-ERK were measured by Western blot analysis. *p < 0.05 versus LV-NC. C and D. Protein expression levels of total AKT and p-AKT were measured by Western blot analysis. No significance (N.S.) p>0.05 versus LV-NC. Data represent means ± SD in three separate experiments. Significance was determined by oneway ANOVA with Tukey's multiple comparisons test.