Literature DB >> 35368782

Donor-Derived Cell Free DNA: Is It All the Same?

Joseph K Melancon1, Ali Khalil2, Mark J Lerman2.   

Abstract

Background: Clinical utility of donor-derived, cellfree DNA (dd-cfDNA) in transplantation has been extensively reviewed, supporting its use as a surveillance tool for the early and accurate detection of allograft injury. Yet studies comparing different assay methods have been lacking.
Methods: Paired sampling of commercially available dd-cfDNA (AlloSure and Prospera) was compared and examined against histology and manufacturer guidance. A total of 76 patients were prospectively assessed, with 11 biopsy sample-proven rejections (antibody-mediated rejection, n=2; T cell-mediated rejection, n=9).
Results: Prospera demonstrated larger measurements of dd-cfDNA in comparison with AlloSure, but this was NS (P=0.12). At current manufacturer recommended diagnostic cutoffs, there was no significant difference in sensitivity, specificity, negative predictive value, or positive predictive value of AlloSure versus Prospera in detecting rejection. AlloSure demonstrated a significantly shorter turnaround time (P=0.01) from blood draw to patient result. Conclusions: Although dd-cfDNAs are similar, they are not the same. Extensive evidence for dd-cfDNA interpretation remains the key to building clinical utility when considering clinical implementation, and remaining consistent to a single platform is important when creating data comparisons.
Copyright © 2020 by the American Society of Nephrology.

Entities:  

Keywords:  allografts; biomarker; cell-free nucleic acids; dd-cfDNA; diagnostic tests; donor derived cell free DNA; kidney transplantation; routine; tissue donors; transplantation

Mesh:

Substances:

Year:  2020        PMID: 35368782      PMCID: PMC8815488          DOI: 10.34067/KID.0003512020

Source DB:  PubMed          Journal:  Kidney360        ISSN: 2641-7650


  11 in total

1.  Cell-Free DNA and Active Rejection in Kidney Allografts.

Authors:  Roy D Bloom; Jonathan S Bromberg; Emilio D Poggio; Suphamai Bunnapradist; Anthony J Langone; Puneet Sood; Arthur J Matas; Shikha Mehta; Roslyn B Mannon; Asif Sharfuddin; Bernard Fischbach; Mohanram Narayanan; Stanley C Jordan; David Cohen; Matthew R Weir; David Hiller; Preethi Prasad; Robert N Woodward; Marica Grskovic; John J Sninsky; James P Yee; Daniel C Brennan
Journal:  J Am Soc Nephrol       Date:  2017-03-09       Impact factor: 10.121

Review 2.  Characteristics, properties, and potential applications of circulating cell-free dna in clinical diagnostics: a focus on transplantation.

Authors:  Karen Sherwood; Eric T Weimer
Journal:  J Immunol Methods       Date:  2018-09-26       Impact factor: 2.303

Review 3.  Next-generation sequencing methods to detect donor-derived cell-free DNA after transplantation.

Authors:  Fungai Dengu
Journal:  Transplant Rev (Orlando)       Date:  2020-03-16       Impact factor: 3.943

4.  A method of comparing the areas under receiver operating characteristic curves derived from the same cases.

Authors:  J A Hanley; B J McNeil
Journal:  Radiology       Date:  1983-09       Impact factor: 11.105

5.  Performance of Donor-derived Cell-free DNA Assays in Kidney Transplant Patients.

Authors:  Marica Grskovic; David Hiller; Robert N Woodward
Journal:  Transplantation       Date:  2020-05       Impact factor: 4.939

6.  Donor-specific Cell-free DNA as a Biomarker in Solid Organ Transplantation. A Systematic Review.

Authors:  Simon Robert Knight; Adam Thorne; Maria Letizia Lo Faro
Journal:  Transplantation       Date:  2019-02       Impact factor: 4.939

7.  The Use of Donor-Derived Cell-Free DNA for Assessment of Allograft Rejection and Injury Status.

Authors:  Charat Thongprayoon; Pradeep Vaitla; Iasmina M Craici; Napat Leeaphorn; Panupong Hansrivijit; Sohail Abdul Salim; Tarun Bathini; Franco H Cabeza Rivera; Wisit Cheungpasitporn
Journal:  J Clin Med       Date:  2020-05-14       Impact factor: 4.241

8.  Optimizing Detection of Kidney Transplant Injury by Assessment of Donor-Derived Cell-Free DNA via Massively Multiplex PCR.

Authors:  Tara K Sigdel; Felipe Acosta Archila; Tudor Constantin; Sarah A Prins; Juliane Liberto; Izabella Damm; Parhom Towfighi; Samantha Navarro; Eser Kirkizlar; Zachary P Demko; Allison Ryan; Styrmir Sigurjonsson; Reuben D Sarwal; Szu-Chuan Hseish; Chitranon Chan-On; Bernhard Zimmermann; Paul R Billings; Solomon Moshkevich; Minnie M Sarwal
Journal:  J Clin Med       Date:  2018-12-23       Impact factor: 4.241

9.  Analytical Validation of a Single-nucleotide Polymorphism-based Donor-derived Cell-free DNA Assay for Detecting Rejection in Kidney Transplant Patients.

Authors:  Yücel Altuğ; Nathan Liang; Rosalyn Ram; Harini Ravi; Ebad Ahmed; Maxim Brevnov; Ryan K Swenerton; Bernhard Zimmermann; Meenakshi Malhotra; Zachary P Demko; Paul R Billings; Allison Ryan
Journal:  Transplantation       Date:  2019-12       Impact factor: 4.939

10.  High levels of dd-cfDNA identify patients with TCMR 1A and borderline allograft rejection at elevated risk of graft injury.

Authors:  Erik Stites; Dhiren Kumar; Oyedolamu Olaitan; Sidney John Swanson; Nicolae Leca; Matthew Weir; Jonathan Bromberg; Joseph Melancon; Irfan Agha; Hasan Fattah; Tarek Alhamad; Yasir Qazi; Alexander Wiseman; Gaurav Gupta
Journal:  Am J Transplant       Date:  2020-03-10       Impact factor: 8.086

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  2 in total

1.  Early Experience Using Donor-derived Cell-free DNA for Surveillance of Rejection Following Simultaneous Pancreas and Kidney Transplantation.

Authors:  Michael D Williams; Mingwei Fei; Erik Schadde; Edward F Hollinger; Edie Y Chan; Oyedolamu Olaitan
Journal:  Transplant Direct       Date:  2022-04-07

Review 2.  Immune checkpoint inhibitors for solid organ transplant recipients: clinical updates.

Authors:  Shun Kawashima; Kole Joachim; Maen Abdelrahim; Ala Abudayyeh; Kenar D Jhaveri; Naoka Murakami
Journal:  Korean J Transplant       Date:  2022-06-03
  2 in total

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