Literature DB >> 35360552

LONGL-Net: temporal correlation structure guided deep learning model to predict longitudinal age-related macular degeneration severity.

Alireza Ganjdanesh1, Jipeng Zhang2, Emily Y Chew3, Ying Ding2, Heng Huang1, Wei Chen2.   

Abstract

Age-related macular degeneration (AMD) is the principal cause of blindness in developed countries, and its prevalence will increase to 288 million people in 2040. Therefore, automated grading and prediction methods can be highly beneficial for recognizing susceptible subjects to late-AMD and enabling clinicians to start preventive actions for them. Clinically, AMD severity is quantified by Color Fundus Photographs (CFP) of the retina, and many machine-learning-based methods are proposed for grading AMD severity. However, few models were developed to predict the longitudinal progression status, i.e. predicting future late-AMD risk based on the current CFP, which is more clinically interesting. In this paper, we propose a new deep-learning-based classification model (LONGL-Net) that can simultaneously grade the current CFP and predict the longitudinal outcome, i.e. whether the subject will be in late-AMD in the future time-point. We design a new temporal-correlation-structure-guided Generative Adversarial Network model that learns the interrelations of temporal changes in CFPs in consecutive time-points and provides interpretability for the classifier's decisions by forecasting AMD symptoms in the future CFPs. We used about 30,000 CFP images from 4,628 participants in the Age-Related Eye Disease Study. Our classifier showed average 0.905 (95% CI: 0.886-0.922) AUC and 0.762 (95% CI: 0.733-0.792) accuracy on the 3-class classification problem of simultaneously grading current time-point's AMD condition and predicting late AMD progression of subjects in the future time-point. We further validated our model on the UK Biobank dataset, where our model showed average 0.905 accuracy and 0.797 sensitivity in grading 300 CFP images.
© The Author(s) 2022. Published by Oxford University Press on behalf of the National Academy of Sciences.

Entities:  

Keywords:  Generative Adversarial Networks; age-related macular degeneration; deep learning; longitudinal outcome prediction

Year:  2022        PMID: 35360552      PMCID: PMC8962776          DOI: 10.1093/pnasnexus/pgab003

Source DB:  PubMed          Journal:  PNAS Nexus        ISSN: 2752-6542


  31 in total

1.  Meta-analysis of genome scans of age-related macular degeneration.

Authors:  Sheila A Fisher; Goncalo R Abecasis; Beverly M Yashar; Sepideh Zareparsi; Anand Swaroop; Sudha K Iyengar; Barbara E K Klein; Ronald Klein; Kristine E Lee; Jacek Majewski; Dennis W Schultz; Michael L Klein; Johanna M Seddon; Susan L Santangelo; Daniel E Weeks; Yvette P Conley; Tammy S Mah; Silke Schmidt; Jonathan L Haines; Margaret A Pericak-Vance; Michael B Gorin; Heidi L Schulz; Fabio Pardi; Cathryn M Lewis; Bernhard H F Weber
Journal:  Hum Mol Genet       Date:  2005-06-29       Impact factor: 6.150

2.  A Deep Learning Algorithm for Prediction of Age-Related Eye Disease Study Severity Scale for Age-Related Macular Degeneration from Color Fundus Photography.

Authors:  Felix Grassmann; Judith Mengelkamp; Caroline Brandl; Sebastian Harsch; Martina E Zimmermann; Birgit Linkohr; Annette Peters; Iris M Heid; Christoph Palm; Bernhard H F Weber
Journal:  Ophthalmology       Date:  2018-04-10       Impact factor: 12.079

3.  Temporal Correlation Structure Learning for MCI Conversion Prediction.

Authors:  Xiaoqian Wang; Weidong Cai; Dinggang Shen; Heng Huang
Journal:  Med Image Comput Comput Assist Interv       Date:  2018-09-13

4.  A randomized, placebo-controlled, clinical trial of high-dose supplementation with vitamins C and E, beta carotene, and zinc for age-related macular degeneration and vision loss: AREDS report no. 8.

Authors: 
Journal:  Arch Ophthalmol       Date:  2001-10

5.  DeepSeeNet: A Deep Learning Model for Automated Classification of Patient-based Age-related Macular Degeneration Severity from Color Fundus Photographs.

Authors:  Yifan Peng; Shazia Dharssi; Qingyu Chen; Tiarnan D Keenan; Elvira Agrón; Wai T Wong; Emily Y Chew; Zhiyong Lu
Journal:  Ophthalmology       Date:  2018-11-22       Impact factor: 12.079

Review 6.  The genetics of age-related macular degeneration (AMD)--Novel targets for designing treatment options?

Authors:  Felix Grassmann; Sascha Fauser; Bernhard H F Weber
Journal:  Eur J Pharm Biopharm       Date:  2015-05-16       Impact factor: 5.571

7.  Progression of geographic atrophy and impact of fundus autofluorescence patterns in age-related macular degeneration.

Authors:  Frank G Holz; Almut Bindewald-Wittich; Monika Fleckenstein; Jens Dreyhaupt; Hendrik P N Scholl; Steffen Schmitz-Valckenberg
Journal:  Am J Ophthalmol       Date:  2006-12-22       Impact factor: 5.258

Review 8.  Global prevalence of age-related macular degeneration and disease burden projection for 2020 and 2040: a systematic review and meta-analysis.

Authors:  Wan Ling Wong; Xinyi Su; Xiang Li; Chui Ming G Cheung; Ronald Klein; Ching-Yu Cheng; Tien Yin Wong
Journal:  Lancet Glob Health       Date:  2014-01-03       Impact factor: 26.763

Review 9.  An international classification and grading system for age-related maculopathy and age-related macular degeneration. The International ARM Epidemiological Study Group.

Authors:  A C Bird; N M Bressler; S B Bressler; I H Chisholm; G Coscas; M D Davis; P T de Jong; C C Klaver; B E Klein; R Klein
Journal:  Surv Ophthalmol       Date:  1995 Mar-Apr       Impact factor: 6.048

10.  Automated Grading of Age-Related Macular Degeneration From Color Fundus Images Using Deep Convolutional Neural Networks.

Authors:  Philippe M Burlina; Neil Joshi; Michael Pekala; Katia D Pacheco; David E Freund; Neil M Bressler
Journal:  JAMA Ophthalmol       Date:  2017-11-01       Impact factor: 7.389

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