| Literature DB >> 35359648 |
Ping Hu1, Yangfan Liu2, Yuntao Li1,3, Geng Guo4, Zhongzhou Su3, Xu Gao5, Junhui Chen1, Yangzhi Qi1, Yang Xu1, Tengfeng Yan1, Liguo Ye1, Qian Sun1, Gang Deng1, Hongbo Zhang6, Qianxue Chen1.
Abstract
Backgrounds: As a most widely used machine learning method, tree-based algorithms have not been applied to predict delayed cerebral ischemia (DCI) in elderly patients with aneurysmal subarachnoid hemorrhage (aSAH). Hence, this study aims to develop the conventional regression and tree-based models and determine which model has better prediction performance for DCI development in hospitalized elderly patients after aSAH.Entities:
Keywords: LASSO; aneurysm; delayed cerebral ischemia; subarachnoid hemorrhage; tree model
Year: 2022 PMID: 35359648 PMCID: PMC8960268 DOI: 10.3389/fneur.2022.791547
Source DB: PubMed Journal: Front Neurol ISSN: 1664-2295 Impact factor: 4.003
Figure 1The flowchart that showed exclusion details and the procedure of this study.
Baseline characteristics of the elderly patients in model training and validation cohorts.
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| Demographics | |||
| Age (years) | 67 (63, 71) | 66 (63, 69) | 0.607 |
| Gender (Female) | 77 (69) | 29 (69) | 1.000 |
| Medical history | |||
| Hypertension | 65 (59) | 19 (45) | 0.195 |
| Diabetes | 5 (5) | 2 (5) | 1.000 |
| CHD | 6 (5) | 2 (5) | 1.000 |
| Smoking | 20 (18) | 7 (17) | 1.000 |
| Drinking | 16 (14) | 4 (10) | 0.595 |
| WFNS grade | 0.500 | ||
| I–II | 76 (69) | 28 (66) | |
| III | 19 (17) | 5 (12) | |
| IV | 8 (7) | 7 (17) | |
| V | 8 (7) | 2 (5) | |
| Hunt and Hess grade | 0.191 | ||
| I–II | 63 (57) | 29 (69) | |
| III | 34 (31) | 7 (17) | |
| IV | 7 (6) | 3 (7) | |
| V | 7 (6) | 3 (7) | |
| Modified Fisher scale | 0.925 | ||
| 1–2 | 47 (42) | 17 (41) | |
| 3 | 33 (30) | 11 (26) | |
| 4 | 31 (28) | 14 (33) | |
| Aneurysm location | 0.240 | ||
| ACA | 98 (88) | 40 (95) | |
| PCA | 13 (12) | 2 (5) | |
| Aneurysm number | 1.000 | ||
| Single | 98 (88) | 38 (90) | |
| Multiple | 13 (12) | 4 (10) | |
| Mean aneurysm size | |||
| Neck (mm) | 3.2 (2.5, 4.25) | 3.2 (2.5, 3.98) | 0.530 |
| Length (mm) | 4.5 (3.5, 5.95) | 4.14 (3, 5.8) | 0.293 |
| Aneurysm treatment | 0.156 | ||
| Clipping | 50 (45) | 25 (60) | |
| Coiling | 61 (55) | 17 (40) | |
| Admission laboratory results | |||
| Glucose (mmol/L) | 7.3 (6.24, 8.55) | 6.94 (5.97, 8.17) | 0.506 |
| D-dimer (mg/L) | 1.48 (0.78, 3.43) | 1.42 (0.88, 3.06) | 0.917 |
| WBC (10∧9/L) | 11.3 (8.7, 13.73) | 11.25 (9.69, 13.97) | 0.606 |
| Neutrophil (10∧9 /L) | 9.67 (7.33, 12.22) | 9.1 (7.56, 11.53) | 0.731 |
| Lymphocyte (10∧9 /L) | 0.85 (0.66, 1.19) | 0.94 (0.69, 1.25) | 0.778 |
| Monocytes (10∧9 /L) | 0.47 (0.33, 0.68) | 0.39 (0.32, 0.66) | 0.629 |
| Admission CT value (HU) | |||
| ClotCT | 57.88 (53, 62.24) | 59.41 (52.82, 62) | 0.806 |
| EdemaCT | 26.4 (24.3, 28.8) | 26.22 (22.33, 29.08) | 0.589 |
| DCI | 31 (28) | 11 (26) | 0.990 |
DCI indicates delayed cerebral ischemia; ACA aneurysm includes anterior cerebral artery, middle cerebral artery, internal cerebral artery, anterior communicating artery; posterior communicating artery; PCA aneurysm includes posterior cerebral artery, basilar artery, anterior inferior cerebellar artery, posterior inferior cerebellar artery, vertebral artery; ACA, anterior circulation aneurysm; PCA, posterior circulation aneurysm; WBC, White blood cell; CT, computer tomography; HU, Hounsfield Unit; WFNS, World Federation of Neurosurgical Surgeons; CHD, Coronary heart disease.
Baseline characteristics of model training cohort based on delayed cerebral ischemia.
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| Demographics | ||||
| Age (years) | 67 (63, 71) | 67 (63.75, 70.25) | 65 (62, 71) | 0.571 |
| Gender (Female) | 77 (69) | 59 (74) | 18 (58) | 0.168 |
| Medical history | ||||
| Hypertension | 65 (59) | 50 (62) | 15 (48) | 0.255 |
| Diabetes | 5 (5) | 5 (6) | 0 (0) | 0.319 |
| CHD | 6 (5) | 2 (2) | 4 (13) | 0.05 |
| Smoking | 20 (18) | 12 (15) | 8 (26) | 0.292 |
| Drinking | 16 (14) | 10 (12) | 6 (19) | 0.376 |
| WFNS grade | <0.001 | |||
| I-II | 76 (68) | 62 (78) | 14 (45) | |
| III | 19 (17) | 13 (16) | 6 (19) | |
| IV | 8 (7) | 3 (4) | 5 (16) | |
| V | 8 (7) | 2 (2) | 6 (19) | |
| Hunt and Hess grade | 0.009 | |||
| I–II | 63 (57) | 52 (65) | 11 (35) | |
| III | 34 (31) | 23 (29) | 11 (35) | |
| IV | 7 (6) | 3 (4) | 4 (13) | |
| V | 7 (6) | 2 (2) | 5 (16) | |
| Modified Fisher scale | 0.623 | |||
| 1–2 | 47 (42) | 35 (44) | 12 (39) | |
| 3 | 33 (30) | 25 (31) | 8 (26) | |
| 4 | 31 (28) | 20 (25) | 11 (35) | |
| Aneurysm location | 1.000 | |||
| ACA | 98 (88) | 70 (88) | 28 (90) | |
| PCA | 13 (12) | 10 (12) | 3 (10) | |
| Aneurysm number | 0.754 | |||
| Single | 98 (88) | 71 (89) | 27 (87) | |
| Multiple (≥2) | 13 (12) | 9 (11) | 4 (13) | |
| Mean aneurysm size | ||||
| Neck (mm) | 3.2 (2.5, 4.25) | 3.2 (2.54, 4.12) | 3.4 (2.35, 4.3) | 0.95 |
| Length (mm) | 4.5 (3.5, 5.95) | 4.25 (3.44, 5.53) | 4.9 (3.85, 6.25) | 0.207 |
| Aneurysm treatment | <0.001 | |||
| Clipping | 50 (45) | 26 (32) | 24 (77) | |
| Coiling | 61 (55) | 54 (68) | 7 (23) | |
| Admission laboratory results | ||||
| Glucose (mmol/L) | 7.3 (6.24, 8.55) | 7.28 (6.15, 8.48) | 7.4 (6.36, 8.7) | 0.696 |
| D-dimer (mg/L) | 1.48 (0.78, 3.43) | 1.35 (0.76, 3.08) | 2.21 (0.86, 4.39) | 0.064 |
| WBC (10∧9/L) | 11.3 (8.7, 13.73) | 10.13 (8.57, 12.7) | 13.7 (11.11, 15.2) | 0.002 |
| Neutrophil (10∧9 /L) | 9.67 (7.33, 12.22) | 8.34 (7, 11.17) | 12.22 (9.37, 13.86) | 0.003 |
| Lymphocyte (10∧9 /L) | 0.85 (0.66, 1.19) | 0.92 (0.68, 1.28) | 0.77 (0.65, 1.05) | 0.293 |
| Monocytes (10∧9 /L) | 0.47 (0.33, 0.68) | 0.46 (0.31, 0.64) | 0.5 (0.38, 0.76) | 0.206 |
| Admission CT value (HU) | ||||
| ClotCT | 57.88 (53, 62.24) | 56.39 (52.23, 60) | 62.59 (57.09, 65.85) | <0.001 |
| EdemaCT | 26.4 (24.3, 28.8) | 26.66 (24.96, 29) | 26 (23.6, 27.08) | 0.175 |
ACA, anterior circulation aneurysm; PCA, posterior circulation aneurysm; WBC, White blood cell; CT, computer tomography; HU, Hounsfield Unit; WFNS, World Federation of Neurosurgical Surgeons; CHD, Coronary heart disease. ACA aneurysm includes anterior cerebral artery, middle cerebral artery, internal cerebral artery, anterior communicating artery; posterior communicating artery; PCA aneurysm includes posterior cerebral artery, basilar artery, anterior inferior cerebellar artery, posterior inferior cerebellar artery, vertebral artery.
Figure 2The training process and optimal parameters of the LASSO and tree ML models were demonstrated. (A) Demonstrates that 23 features finally decreased to two features when using an optimal λ of 0.1356784 and log(λ) of −1.997 parameters. (B) Shows that the optimal decision nodes were CT value of subarachnoid clot and WBC count during the training process of DT. The minimum error was obtained when the optima tree number was 63, the training process of RF is shown in (C). (D) Displays the training process of XGBoost, and we can obtain the best prediction power when gamma of 0.25, maximum depth of 2, and nrounds value of 100.
Figure 3The performance and evaluation of the LASSO regression and tree-based models. (A) ROC and AUC value of LASSO and tree-based modes in training cohort; (B) the ROC and AUC value of LASSO and tree-based modes in validation cohort. ROC, receiver operating characteristic curve; AUC, area under the curve; LASSO, least absolute shrinkage and selection operator; DT, decision tree; RF, random forest; XGBoost, extreme gradient boosting.
LASSO and tree-based model performance and validation.
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| Internal | LASSO | 77.4 | 48.3 | 88.7 |
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| DT | 81.1 | 77.7 | 81.7 |
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| RF | 100 | 100 | 100 |
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| XGBoost | 87.4 | 97.5 | 61.3 |
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| External | LASSO | 80.9 | 54.5 | 73.8 | 62% | 90% |
| DT | 78.5 | 66.6 | 80.5 | 57% | 36% | |
| RF | 85.7 | 100 | 83.7 | 62% | 45% | |
| XGBoost | 83.3 | 96.7 | 45.4 | 57% | 36% |
LASSO indicates least absolute shrinkage and selection operator; DT, decision tree model; RF, random forest; XGBoost, extreme gradient boosting.
Figure 4Area under the precision-recall curve (AUC-PR) of all prediction models. (A) the AUC-PR of LASSO; (B) the AUC-PR of DT; (C) the AUC-PR of RF; (D) the AUC-PR of XGBoost. LASSO, least absolute shrinkage and selection operator; DT, decision tree; RF, random forest; XGBoost, extreme gradient boosting.
Figure 5All admission clinical feature importance. ClotCT, CT value of subarachnoid blood clot; WBC, white blood cell; LC, lymphocyte; NC, neutrophil; edemaCT, CT value of cerebral edema; HH, Hunt and Hess grade; MC, monocyte.