Literature DB >> 35356966

AAA+ proteins: one motor, multiple ways to work.

JiaBei Lin1, James Shorter1, Aaron L Lucius2.   

Abstract

Numerous ATPases associated with diverse cellular activities (AAA+) proteins form hexameric, ring-shaped complexes that function via ATPase-coupled translocation of substrates across the central channel. Cryo-electron microscopy of AAA+ proteins processing substrate has revealed non-symmetric, staircase-like hexameric structures that indicate a sequential clockwise/2-residue step translocation model for these motors. However, for many of the AAA+ proteins that share similar structural features, their translocation properties have not yet been experimentally determined. In the cases where translocation mechanisms have been determined, a two-residue translocation step-size has not been resolved. In this review, we explore Hsp104, ClpB, ClpA and ClpX as examples to review the experimental methods that have been used to examine, in solution, the translocation mechanisms employed by AAA+ motor proteins. We then ask whether AAA+ motors sharing similar structural features can have different translocation mechanisms. Finally, we discuss whether a single AAA+ motor can adopt multiple translocation mechanisms that are responsive to different challenges imposed by the substrate or the environment. We suggest that AAA+ motors adopt more than one translocation mechanism and are tuned to switch to the most energetically efficient mechanism when constraints are applied.
© 2022 The Author(s). Published by Portland Press Limited on behalf of the Biochemical Society.

Entities:  

Keywords:  AAA+; ClpA; ClpB; Hsp104; clpx

Mesh:

Substances:

Year:  2022        PMID: 35356966      PMCID: PMC9115847          DOI: 10.1042/BST20200350

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   4.919


  94 in total

1.  Examination of the dynamic assembly equilibrium for E. coli ClpB.

Authors:  JiaBei Lin; Aaron L Lucius
Journal:  Proteins       Date:  2015-09-10

2.  Protein disaggregation by the AAA+ chaperone ClpB involves partial threading of looped polypeptide segments.

Authors:  Tobias Haslberger; Agnieszka Zdanowicz; Ingo Brand; Janine Kirstein; Kürsad Turgay; Axel Mogk; Bernd Bukau
Journal:  Nat Struct Mol Biol       Date:  2008-05-18       Impact factor: 15.369

3.  Hsp104 and Potentiated Variants Can Operate as Distinct Nonprocessive Translocases.

Authors:  Clarissa L Durie; JiaBei Lin; Nathaniel W Scull; Korrie L Mack; Meredith E Jackrel; Elizabeth A Sweeny; Laura M Castellano; James Shorter; Aaron L Lucius
Journal:  Biophys J       Date:  2019-04-05       Impact factor: 4.033

4.  Conformational plasticity of the ClpAP AAA+ protease couples protein unfolding and proteolysis.

Authors:  Kyle E Lopez; Alexandrea N Rizo; Eric Tse; JiaBei Lin; Nathaniel W Scull; Aye C Thwin; Aaron L Lucius; James Shorter; Daniel R Southworth
Journal:  Nat Struct Mol Biol       Date:  2020-04-20       Impact factor: 15.369

5.  Nuclear-Import Receptors Reverse Aberrant Phase Transitions of RNA-Binding Proteins with Prion-like Domains.

Authors:  Lin Guo; Hong Joo Kim; Hejia Wang; John Monaghan; Fernande Freyermuth; Julie C Sung; Kevin O'Donovan; Charlotte M Fare; Zamia Diaz; Nikita Singh; Zi Chao Zhang; Maura Coughlin; Elizabeth A Sweeny; Morgan E DeSantis; Meredith E Jackrel; Christopher B Rodell; Jason A Burdick; Oliver D King; Aaron D Gitler; Clotilde Lagier-Tourenne; Udai Bhan Pandey; Yuh Min Chook; J Paul Taylor; James Shorter
Journal:  Cell       Date:  2018-04-19       Impact factor: 41.582

Review 6.  Structure and function of ClpXP, a AAA+ proteolytic machine powered by probabilistic ATP hydrolysis.

Authors:  Robert T Sauer; Xue Fei; Tristan A Bell; Tania A Baker
Journal:  Crit Rev Biochem Mol Biol       Date:  2021-12-19       Impact factor: 8.250

7.  The Escherichia coli ClpA molecular chaperone self-assembles into tetramers.

Authors:  P Keith Veronese; Ryan P Stafford; Aaron L Lucius
Journal:  Biochemistry       Date:  2009-10-06       Impact factor: 3.162

Review 8.  Mechanistic and Structural Insights into the Prion-Disaggregase Activity of Hsp104.

Authors:  Elizabeth A Sweeny; James Shorter
Journal:  J Mol Biol       Date:  2015-12-01       Impact factor: 5.469

9.  Structure of Vps4 with circular peptides and implications for translocation of two polypeptide chains by AAA+ ATPases.

Authors:  Han Han; James M Fulcher; Venkata P Dandey; Janet H Iwasa; Wesley I Sundquist; Michael S Kay; Peter S Shen; Christopher P Hill
Journal:  Elife       Date:  2019-06-11       Impact factor: 8.140

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  2 in total

1.  Unique structural features govern the activity of a human mitochondrial AAA+ disaggregase, Skd3.

Authors:  Ryan R Cupo; Alexandrea N Rizo; Gabriel A Braun; Eric Tse; Edward Chuang; Kushol Gupta; Daniel R Southworth; James Shorter
Journal:  Cell Rep       Date:  2022-09-27       Impact factor: 9.995

Review 2.  Host cell stress response as a predictor of COVID-19 infectivity and disease progression.

Authors:  Celine Caillet; Melissa Louise Stofberg; Victor Muleya; Addmore Shonhai; Tawanda Zininga
Journal:  Front Mol Biosci       Date:  2022-08-11
  2 in total

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