Literature DB >> 35347417

Characteristics of the TDRD1 gene promoter in chickens.

Xiaomin Gao1,2,3, Xiaolin Sun4,5, Pei Xu4,5, Xiang Shi1,2,3, Ming Zhang1,2,3, Xia Yuan1,2,3, Jingyi Jiang1,2,3, Kai Jin1,2,3, Qisheng Zuo1,2,3, Yani Zhang1,2,3, Bichun Li6,7,8.   

Abstract

Tudor domain containing 1 (TDRD1) is a member of the TDRD family and plays an important role in embryogenesis and gametogenesis. A detailed study of the characteristics of chicken TDRD1 can lay a foundation for the study of chicken spermatogonia stem cell formation and spermatogenesis. We cloned 2117 bp upstream fragment of TDRD1 promoter and constructed a series of recombinant vectors with different length deletions. The dual-luciferase experiments reveal that the upstream region of - 161 to 0 bp was its core transcription promoter region. Bioinformatics analysis predicted the possible binding of Transcription Factor 7 Like 2 (TCF7L2) and Zinc Finger E-Box-Binding Homeobox 1(ZEB1) transcription factors in the core region. The transcriptional activity of TDRD1 was significantly decreased after mutation of TCF7L2-binding site, while that of TDRD1 was significantly increased after mutation of ZEB1-binding site. Further, ChIP experiments verified that TCF7L2 enriched in the TDRD1 core transcriptional initiation region, suggesting that TCF7L2 and ZEB1 play an important role in the regulation of TDRD1. In summary, the region from - 161 to 0 bp is the core promoter region of TDRD1; ZEB1 and TCF7L2 bind to the TDRD1 promoter region and TCF7L2 activates the transcription of TDRD1 gene.
© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  Chicken; Promoter; TCF7L2; TDRD1; Transcription factor

Mesh:

Substances:

Year:  2022        PMID: 35347417     DOI: 10.1007/s00438-022-01886-2

Source DB:  PubMed          Journal:  Mol Genet Genomics        ISSN: 1617-4623            Impact factor:   3.291


  7 in total

1.  Wnt signaling meets internal dissent.

Authors:  Elizabeth A Grove
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2.  Tudor domains bind symmetrical dimethylated arginines.

Authors:  Jocelyn Côté; Stéphane Richard
Journal:  J Biol Chem       Date:  2005-06-06       Impact factor: 5.157

3.  Tdrd1/Mtr-1, a tudor-related gene, is essential for male germ-cell differentiation and nuage/germinal granule formation in mice.

Authors:  Shinichiro Chuma; Mihoko Hosokawa; Kouichi Kitamura; Shinya Kasai; Makio Fujioka; Masateru Hiyoshi; Kazufumi Takamune; Toshiaki Noce; Norio Nakatsuji
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-12       Impact factor: 11.205

4.  TCF7L2 polymorphisms and progression to diabetes in the Diabetes Prevention Program.

Authors:  Jose C Florez; Kathleen A Jablonski; Nick Bayley; Toni I Pollin; Paul I W de Bakker; Alan R Shuldiner; William C Knowler; David M Nathan; David Altshuler
Journal:  N Engl J Med       Date:  2006-07-20       Impact factor: 91.245

5.  Associations between PIWI proteins and TDRD1/MTR-1 are critical for integrated subcellular localization in murine male germ cells.

Authors:  Kanako Kojima; Satomi Kuramochi-Miyagawa; Shinichiro Chuma; Takashi Tanaka; Norio Nakatsuji; Tohru Kimura; Toru Nakano
Journal:  Genes Cells       Date:  2009-09-07       Impact factor: 1.891

6.  WNT7a induces E-cadherin in lung cancer cells.

Authors:  Tatsuo Ohira; Robert M Gemmill; Kevin Ferguson; Sophie Kusy; Joëlle Roche; Elisabeth Brambilla; Chan Zeng; Anna Baron; Lynne Bemis; Paul Erickson; Elizabeth Wilder; Anil Rustgi; Jan Kitajewski; Edward Gabrielson; Roy Bremnes; Wilbur Franklin; Harry A Drabkin
Journal:  Proc Natl Acad Sci U S A       Date:  2003-08-22       Impact factor: 11.205

Review 7.  Wnt signaling inside the nucleus.

Authors:  Miki Shitashige; Setsuo Hirohashi; Tesshi Yamada
Journal:  Cancer Sci       Date:  2008-01-02       Impact factor: 6.716

  7 in total

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