Literature DB >> 35344653

The Atypical Cobalamin-Dependent S-Adenosyl-l-Methionine Nonradical Methylase TsrM and Its Radical Counterparts.

Emily C Ulrich, Catherine L Drennan1.   

Abstract

Cobalamin (Cbl)-dependent S-adenosyl-l-methionine (AdoMet) radical methylases are known for their use of a dual cofactor system to perform challenging radical methylation reactions at unactivated carbon and phosphorus centers. These enzymes are part of a larger subgroup of Cbl-dependent AdoMet radical enzymes that also perform difficult ring contractions and radical rearrangements. This subgroup is a largely untapped reservoir of diverse chemistry that requires steady efforts in biochemical and structural characterization to reveal its complexity. In this Perspective, we highlight the significant efforts over many years to elucidate the function, mechanism, and structure of TsrM, an unexpected nonradical methylase in this subgroup. We also discuss recent achievements in characterizing radical methylase subgroup members that exemplify how key tools in mechanistic enzymology are valuable time and again. Finally, we identify recent enzyme activity studies that have made use of bioinformatic analyses to expand our definition of the subgroup. Additional breakthroughs in radical (and nonradical) enzymatic chemistry and challenging transformations from the unexplored space of this subgroup are undoubtedly on the horizon.

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Year:  2022        PMID: 35344653      PMCID: PMC8992657          DOI: 10.1021/jacs.1c12064

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  64 in total

1.  Heterologous production of fosfomycin and identification of the minimal biosynthetic gene cluster.

Authors:  Ryan D Woodyer; Zengyi Shao; Paul M Thomas; Neil L Kelleher; Joshua A V Blodgett; William W Metcalf; Wilfred A van der Donk; Huimin Zhao
Journal:  Chem Biol       Date:  2006-11

2.  New insight into the mechanism of methyl transfer during the biosynthesis of fosfomycin.

Authors:  Ryan D Woodyer; Gongyong Li; Huimin Zhao; Wilfred A van der Donk
Journal:  Chem Commun (Camb)       Date:  2006-11-23       Impact factor: 6.222

3.  Thiostrepton tryptophan methyltransferase expands the chemistry of radical SAM enzymes.

Authors:  Stéphane Pierre; Alain Guillot; Alhosna Benjdia; Corine Sandström; Philippe Langella; Olivier Berteau
Journal:  Nat Chem Biol       Date:  2012-10-14       Impact factor: 15.040

Review 4.  Radical S-adenosylmethionine enzymes.

Authors:  Joan B Broderick; Benjamin R Duffus; Kaitlin S Duschene; Eric M Shepard
Journal:  Chem Rev       Date:  2014-01-29       Impact factor: 60.622

Review 5.  Structural insights into radical generation by the radical SAM superfamily.

Authors:  Jessica L Vey; Catherine L Drennan
Journal:  Chem Rev       Date:  2011-03-03       Impact factor: 60.622

Review 6.  Cobalamin-dependent radical S-adenosyl-l-methionine enzymes in natural product biosynthesis.

Authors:  Susan C Wang
Journal:  Nat Prod Rep       Date:  2018-08-15       Impact factor: 13.423

7.  CloN6, a novel methyltransferase catalysing the methylation of the pyrrole-2-carboxyl moiety of clorobiocin.

Authors:  Lucia Westrich; Lutz Heide; Shu-Ming Li
Journal:  Chembiochem       Date:  2003-08-04       Impact factor: 3.164

8.  Stereospecific Radical-Mediated B12-Dependent Methyl Transfer by the Fosfomycin Biosynthesis Enzyme Fom3.

Authors:  Martin I McLaughlin; Wilfred A van der Donk
Journal:  Biochemistry       Date:  2018-07-10       Impact factor: 3.162

9.  Structure of a B12-dependent radical SAM enzyme in carbapenem biosynthesis.

Authors:  Hayley L Knox; Erica K Sinner; Craig A Townsend; Amie K Boal; Squire J Booker
Journal:  Nature       Date:  2022-02-02       Impact factor: 49.962

10.  Evolution of Methods for the Study of Cobalamin-Dependent Radical SAM Enzymes.

Authors:  Erica K Sinner; Daniel R Marous; Craig A Townsend
Journal:  ACS Bio Med Chem Au       Date:  2021-10-13
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