Literature DB >> 35342592

Building integral projection models with nonindependent vital rates.

Yik Leung Fung1,2, Ken Newman1,2, Ruth King1, Perry de Valpine3.   

Abstract

Population dynamics are functions of several demographic processes including survival, reproduction, somatic growth, and maturation. The rates or probabilities for these processes can vary by time, by location, and by individual. These processes can co-vary and interact to varying degrees, e.g., an animal can only reproduce when it is in a particular maturation state. Population dynamics models that treat the processes as independent may yield somewhat biased or imprecise parameter estimates, as well as predictions of population abundances or densities. However, commonly used integral projection models (IPMs) typically assume independence across these demographic processes. We examine several approaches for modelling between process dependence in IPMs and include cases where the processes co-vary as a function of time (temporal variation), co-vary within each individual (individual heterogeneity), and combinations of these (temporal variation and individual heterogeneity). We compare our methods to conventional IPMs, which treat vital rates independent, using simulations and a case study of Soay sheep (Ovis aries). In particular, our results indicate that correlation between vital rates can moderately affect variability of some population-level statistics. Therefore, including such dependent structures is generally advisable when fitting IPMs to ascertain whether or not such between vital rate dependencies exist, which in turn can have subsequent impact on population management or life-history evolution.
© 2022 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.

Entities:  

Keywords:  Soay sheep; copula models; correlated vital rates; generalized linear mixed models; population growth rate; reproduction investment

Year:  2022        PMID: 35342592      PMCID: PMC8935301          DOI: 10.1002/ece3.8682

Source DB:  PubMed          Journal:  Ecol Evol        ISSN: 2045-7758            Impact factor:   2.912


  32 in total

1.  Estimating covariation between vital rates: a simulation study of connected vs. separate generalized linear mixed models (GLMMs).

Authors:  Margaret E K Evans; Kent E Holsinger
Journal:  Theor Popul Biol       Date:  2012-03-23       Impact factor: 1.570

2.  Correctly estimating how environmental stochasticity influences fitness and population growth.

Authors:  Daniel F Doak; William F Morris; Cathy Pfister; Bruce E Kendall; Emilio M Bruna
Journal:  Am Nat       Date:  2005-04-19       Impact factor: 3.926

3.  Age-dependent traits: a new statistical model to separate within- and between-individual effects.

Authors:  M van de Pol; S Verhulst
Journal:  Am Nat       Date:  2006-03-20       Impact factor: 3.926

4.  Individual heterogeneity and senescence in silvereyes on Heron Island.

Authors:  Jonas Knape; Niclas Jonzén; Martin Sköld; Jiro Kikkawa; Hamish McCallum
Journal:  Ecology       Date:  2011-04       Impact factor: 5.499

5.  Successful by Chance? The Power of Mixed Models and Neutral Simulations for the Detection of Individual Fixed Heterogeneity in Fitness Components.

Authors:  Timothée Bonnet; Erik Postma
Journal:  Am Nat       Date:  2016-01       Impact factor: 3.926

6.  Modeling Adaptive and Nonadaptive Responses of Populations to Environmental Change.

Authors:  Tim Coulson; Bruce E Kendall; Julia Barthold; Floriane Plard; Susanne Schindler; Arpat Ozgul; Jean-Michel Gaillard
Journal:  Am Nat       Date:  2017-06-29       Impact factor: 3.926

Review 7.  The analysis of multivariate longitudinal data: a review.

Authors:  Geert Verbeke; Steffen Fieuws; Geert Molenberghs; Marie Davidian
Journal:  Stat Methods Med Res       Date:  2012-04-20       Impact factor: 3.021

8.  Dynamic heterogeneity and life history variability in the kittiwake.

Authors:  Ulrich K Steiner; Shripad Tuljapurkar; Steven Hecht Orzack
Journal:  J Anim Ecol       Date:  2010-01-20       Impact factor: 5.091

9.  A pathway for multivariate analysis of ecological communities using copulas.

Authors:  Marti J Anderson; Perry de Valpine; Andrew Punnett; Arden E Miller
Journal:  Ecol Evol       Date:  2019-03-05       Impact factor: 2.912

10.  Building integral projection models: a user's guide.

Authors:  Mark Rees; Dylan Z Childs; Stephen P Ellner
Journal:  J Anim Ecol       Date:  2014-01-20       Impact factor: 5.091

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