Literature DB >> 35332675

Novel RETREG1 (FAM134B) founder allele is linked to HSAN2B and renal disease in a Turkish family.

Elifcan Taşdelen1,2, Daniel G Calame3,4,5, Gulsen Akay5,6, Tadahiro Mitani5, Jawid M Fatih5, Isabella Herman3,4,5,7, Haowei Du5, Zeynep Coban-Akdemir5,8, Dana Marafi5,9, Shalini N Jhangiani10, Jennifer E Posey5, Richard A Gibbs5,10, Taylan Altıparmak11, Nüket Yürür Kutlay1, James R Lupski4,5,10,12, Davut Pehlivan3,4,5.   

Abstract

Hereditary sensory and autonomic neuropathy type 2B (HSAN2B) is a rare autosomal recessive peripheral neuropathy caused by biallelic variants in RETREG1 (formerly FAM134B). HSAN2B is characterized by sensory impairment resulting in skin ulcerations, amputations, and osteomyelitis as well as variable weakness, spasticity, and autonomic dysfunction. Here, we report four affected individuals with recurrent osteomyelitis, ulceration, and amputation of hands and feet, sensory neuropathy, hyperhidrosis, urinary incontinence, and renal failure from a family without any known shared parental ancestry. Due to the history of chronic recurrent multifocal osteomyelitis and microcytic anemia, a diagnosis of Majeed syndrome was considered; however, sequencing of LPIN2 was negative. Family-based exome sequencing (ES) revealed a novel homozygous ultrarare RETREG1 variant NM_001034850.2:c.321G>A;p.Trp107Ter. Electrophysiological studies of the proband demonstrated axonal sensorimotor neuropathy predominantly in the lower extremities. Consistent with the lack of shared ancestry, the coefficient of inbreeding calculated from ES data was low (F = 0.002), but absence of heterozygosity (AOH) analysis demonstrated a 7.2 Mb AOH block surrounding the variant consistent with a founder allele. Two of the four affected individuals had unexplained renal failure which has not been reported in HSAN2B cases to date. Therefore, this report describes a novel RETREG1 founder allele and suggests renal failure may be an unrecognized feature of the RETREG1-disease spectrum.
© 2022 Wiley Periodicals LLC.

Entities:  

Keywords:  FAM134B; HSAN2B; RETREG1; neuropathy; renal disease; sensory and autonomic

Mesh:

Substances:

Year:  2022        PMID: 35332675      PMCID: PMC9197852          DOI: 10.1002/ajmg.a.62727

Source DB:  PubMed          Journal:  Am J Med Genet A        ISSN: 1552-4825            Impact factor:   2.578


  22 in total

1.  Clan genomics and the complex architecture of human disease.

Authors:  James R Lupski; John W Belmont; Eric Boerwinkle; Richard A Gibbs
Journal:  Cell       Date:  2011-09-30       Impact factor: 41.582

2.  The Genomics of Arthrogryposis, a Complex Trait: Candidate Genes and Further Evidence for Oligogenic Inheritance.

Authors:  Davut Pehlivan; Yavuz Bayram; Nilay Gunes; Zeynep Coban Akdemir; Anju Shukla; Tatjana Bierhals; Burcu Tabakci; Yavuz Sahin; Alper Gezdirici; Jawid M Fatih; Elif Yilmaz Gulec; Gozde Yesil; Jaya Punetha; Zeynep Ocak; Christopher M Grochowski; Ender Karaca; Hatice Mutlu Albayrak; Periyasamy Radhakrishnan; Haktan Bagis Erdem; Ibrahim Sahin; Timur Yildirim; Ilhan A Bayhan; Aysegul Bursali; Muhsin Elmas; Zafer Yuksel; Ozturk Ozdemir; Fatma Silan; Onur Yildiz; Osman Yesilbas; Sedat Isikay; Burhan Balta; Shen Gu; Shalini N Jhangiani; Harsha Doddapaneni; Jianhong Hu; Donna M Muzny; Eric Boerwinkle; Richard A Gibbs; Konstantinos Tsiakas; Maja Hempel; Katta Mohan Girisha; Davut Gul; Jennifer E Posey; Nursel H Elcioglu; Beyhan Tuysuz; James R Lupski
Journal:  Am J Hum Genet       Date:  2019-06-20       Impact factor: 11.025

3.  Hereditary sensory neuropathy, type II. Clinical, electrophysiologic, histologic, and biochemical studies of a Quebec kinship.

Authors:  M Ota; R D Ellefson; E H Lambert; P J Dyck
Journal:  Arch Neurol       Date:  1973-07

4.  Mutations in FAM134B, encoding a newly identified Golgi protein, cause severe sensory and autonomic neuropathy.

Authors:  Ingo Kurth; Torsten Pamminger; J Christopher Hennings; Désirée Soehendra; Antje K Huebner; Annelies Rotthier; Jonathan Baets; Jan Senderek; Haluk Topaloglu; Sandra A Farrell; Gudrun Nürnberg; Peter Nürnberg; Peter De Jonghe; Andreas Gal; Christoph Kaether; Vincent Timmerman; Christian A Hübner
Journal:  Nat Genet       Date:  2009-10-18       Impact factor: 38.330

5.  Pro-inflammation Associated with a Gain-of-Function Mutation (R284S) in the Innate Immune Sensor STING.

Authors:  Hiroyasu Konno; Ivan K Chinn; Diana Hong; Jordan S Orange; James R Lupski; Alejandra Mendoza; Luis A Pedroza; Glen N Barber
Journal:  Cell Rep       Date:  2018-04-24       Impact factor: 9.423

6.  Hereditary Sensory and Autonomic Neuropathy 2B Caused by a Novel RETREG1 Mutation (c.765dupT) and Paternal Uniparental Isodisomy of Chromosome 5.

Authors:  Geun-Young Park; Dae-Hyun Jang; Dong-Woo Lee; Ja-Hyun Jang; Joungsu Joo
Journal:  Front Genet       Date:  2019-10-31       Impact factor: 4.599

7.  Mutations in COPA lead to abnormal trafficking of STING to the Golgi and interferon signaling.

Authors:  Alice Lepelley; Maria José Martin-Niclós; Melvin Le Bihan; Joseph A Marsh; Carolina Uggenti; Gillian I Rice; Vincent Bondet; Darragh Duffy; Jonny Hertzog; Jan Rehwinkel; Serge Amselem; Siham Boulisfane-El Khalifi; Mary Brennan; Edwin Carter; Lucienne Chatenoud; Stéphanie Chhun; Aurore Coulomb l'Hermine; Marine Depp; Marie Legendre; Karen J Mackenzie; Jonathan Marey; Catherine McDougall; Kathryn J McKenzie; Thierry Jo Molina; Bénédicte Neven; Luis Seabra; Caroline Thumerelle; Marie Wislez; Nadia Nathan; Nicolas Manel; Yanick J Crow; Marie-Louise Frémond
Journal:  J Exp Med       Date:  2020-11-02       Impact factor: 14.307

Review 8.  Hereditary sensory and autonomic neuropathies: types II, III, and IV.

Authors:  Felicia B Axelrod; Gabrielle Gold-von Simson
Journal:  Orphanet J Rare Dis       Date:  2007-10-03       Impact factor: 4.123

9.  Exome Sequencing: Mutilating Sensory Neuropathy with Spastic Paraplegia due to a Mutation in FAM134B Gene.

Authors:  Salma M Wakil; Dorota Monies; Samya Hagos; Fahad Al-Ajlan; Josef Finsterer; Aisha Al Qahtani; Khushnooda Ramzan; Rawan Al Humaidy; Mohamed A Al-Muhaizea; Brian Meyer; Saeed A Bohlega
Journal:  Case Rep Genet       Date:  2018-12-12

10.  Functional biology of the Steel syndrome founder allele and evidence for clan genomics derivation of COL27A1 pathogenic alleles worldwide.

Authors:  Claudia Gonzaga-Jauregui; Gozde Yesil; Harikiran Nistala; Alper Gezdirici; Yavuz Bayram; Kalyan C Nannuru; Davut Pehlivan; Bo Yuan; Johanna Jimenez; Yavuz Sahin; Ingrid S Paine; Zeynep Coban Akdemir; Saathyaki Rajamani; Jeffrey Staples; John Dronzek; Kristen Howell; Jawid M Fatih; Silvia Smaldone; Alan E Schlesinger; Norman Ramírez; Alberto S Cornier; Melissa A Kelly; Robert Haber; Shek Man Chim; Kristy Nieman; Nan Wu; Johnathon Walls; William Poueymirou; Chia-Jen Siao; V Reid Sutton; Marc S Williams; Jennifer E Posey; Richard A Gibbs; Simon Carlo; David H Tegay; Aris N Economides; James R Lupski
Journal:  Eur J Hum Genet       Date:  2020-05-06       Impact factor: 4.246

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