Literature DB >> 35331688

Engineering rhodopsins' activation spectra using a FRET-based approach.

Connor Beck1, Yiyang Gong2.   

Abstract

In the past decade, optogenetics has become a nearly ubiquitous tool in neuroscience because it enables researchers to manipulate neural activity with high temporal resolution and genetic specificity. Rational engineering of optogenetic tools has produced channelrhodopsins with a wide range of kinetics and photocurrent magnitude. Genome mining for previously unidentified species of rhodopsin has uncovered optogenetic tools with diverse spectral sensitivities. However, rational engineering of a rhodopsin has thus far been unable to re-engineer spectral sensitivity while preserving full photocurrent. Here, we developed and characterized ChroME-mTFP, a rhodopsin-fluorescent protein fusion that drives photocurrent through Förster resonance energy transfer (FRET). This FRET-opsin mechanism artificially broadened the activation spectrum of the blue-green-light-activated rhodopsin ChroME by approximately 50 nm, driving higher photocurrent at blue-shifted excitation wavelengths without sacrificing kinetics. The excitation spectra's increase at short wavelengths enabled us to optogenetically excite neurons at lower excitation powers with shorter wavelengths of light. Increasing this rhodopsin's sensitivity to shorter, bluer wavelengths pushes it toward dual-channel, crosstalk-free optogenetic stimulation and imaging with green-light-activated sensors. However, this iteration of FRET-opsin suffers from some imaging-light-induced photocurrent crosstalk from green or yellow light due to maintained, low-efficiency excitation at longer wavelengths.
Copyright © 2022 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2022        PMID: 35331688      PMCID: PMC9117881          DOI: 10.1016/j.bpj.2022.03.024

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  49 in total

1.  Millisecond-timescale, genetically targeted optical control of neural activity.

Authors:  Edward S Boyden; Feng Zhang; Ernst Bamberg; Georg Nagel; Karl Deisseroth
Journal:  Nat Neurosci       Date:  2005-08-14       Impact factor: 24.884

2.  Directed evolution of Gloeobacter violaceus rhodopsin spectral properties.

Authors:  Martin K M Engqvist; R Scott McIsaac; Peter Dollinger; Nicholas C Flytzanis; Michael Abrams; Stanford Schor; Frances H Arnold
Journal:  J Mol Biol       Date:  2014-06-28       Impact factor: 5.469

3.  Simultaneous cellular-resolution optical perturbation and imaging of place cell firing fields.

Authors:  John Peter Rickgauer; Karl Deisseroth; David W Tank
Journal:  Nat Neurosci       Date:  2014-11-17       Impact factor: 24.884

4.  Channelrhodopsin-2, a directly light-gated cation-selective membrane channel.

Authors:  Georg Nagel; Tanjef Szellas; Wolfram Huhn; Suneel Kateriya; Nona Adeishvili; Peter Berthold; Doris Ollig; Peter Hegemann; Ernst Bamberg
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-13       Impact factor: 11.205

5.  ReaChR: a red-shifted variant of channelrhodopsin enables deep transcranial optogenetic excitation.

Authors:  John Y Lin; Per Magne Knutsen; Arnaud Muller; David Kleinfeld; Roger Y Tsien
Journal:  Nat Neurosci       Date:  2013-09-01       Impact factor: 24.884

6.  Simultaneous all-optical manipulation and recording of neural circuit activity with cellular resolution in vivo.

Authors:  Adam M Packer; Lloyd E Russell; Henry W P Dalgleish; Michael Häusser
Journal:  Nat Methods       Date:  2014-12-22       Impact factor: 28.547

7.  Machine learning-guided channelrhodopsin engineering enables minimally invasive optogenetics.

Authors:  Kevin K Yang; J Elliott Robinson; Claire N Bedbrook; Elisha D Mackey; Viviana Gradinaru; Frances H Arnold
Journal:  Nat Methods       Date:  2019-10-14       Impact factor: 28.547

8.  A high-speed, bright, red fluorescent voltage sensor to detect neural activity.

Authors:  Connor Beck; Yiyang Gong
Journal:  Sci Rep       Date:  2019-11-04       Impact factor: 4.379

9.  High frequency neural spiking and auditory signaling by ultrafast red-shifted optogenetics.

Authors:  Thomas Mager; David Lopez de la Morena; Verena Senn; Johannes Schlotte; Anna D Errico; Katrin Feldbauer; Christian Wrobel; Sangyong Jung; Kai Bodensiek; Vladan Rankovic; Lorcan Browne; Antoine Huet; Josephine Jüttner; Phillip G Wood; Johannes J Letzkus; Tobias Moser; Ernst Bamberg
Journal:  Nat Commun       Date:  2018-05-01       Impact factor: 14.919

10.  A general approach to engineer positive-going eFRET voltage indicators.

Authors:  Ahmed S Abdelfattah; Rosario Valenti; Jihong Zheng; Allan Wong; Kaspar Podgorski; Minoru Koyama; Douglas S Kim; Eric R Schreiter
Journal:  Nat Commun       Date:  2020-07-10       Impact factor: 14.919

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