| Literature DB >> 35309407 |
Yasin Goa1,2, Hussein Mohammed2, Walelign Worku2, Elias Urage3.
Abstract
Genotype by environment interaction (GEI) markedly influences the success of breeding strategies in a versatile crop such as cowpea (Vigna unguiculata (L.) Walp.). Twenty cowpea genotypes were tested in a randomized complete block design with three replications at Gofa, Kucha, and Humbo in Meher seasons of 2016 and 2017 (E1 to E6) and Belg seasons of 2017 and 2018 (E7 to E12) to quantify and evaluate the effects of genotypes, environments and their interactions for grain yield of cowpea genotypes and to identify stable and/or high-yielding genotypes. The environment, genotype, and GEI effects were highly significant (p < 0.001), with the contribution of 42.3%, 23.0%, and 34.7%, respectively to the TSS. Additive main effect and multiplicative interaction (AMMI), genotype main effects plus genotype-environment interaction (GGE), ASV (AMMI stability value), and Genotype stability index (GSI) were used to identify stable genotypes. The GGE-biplot model showed that the twelve environments used for the study clustered under three mega-environments. Our results showed that IT96D-604(G12), IT-89KD (G16), IT93K-293-2-2 (G14), 93K-619-1(G13), IT97K-569-9(G20), and IT99K-1060(G15) scored the highest grain yield (1.67, 1.62, 1.55, 1.51, 1.51, and 1.45 t ha-1), respectively, over environments. AMMI and GGE biplots analyses identified G16 (IT-89KD) and G14 (IT93K-293-2-2) as stable and high-yielding genotypes across environments and can be further tested in variety verification and later on released as varieties and can also be used for different breeding purposes in all cowpea growing areas in southern Ethiopia. The four high-yielding genotypes IT96D-604, 93K-619-1, IT97K-569-9, and IT99K-1060 could be recommended to be included in breeding or variety verification trials for release. Moreover, our results denoted the effectiveness of AMMI and GGE biplot techniques for selecting stable genotypes, high yielding, and responsive.Entities:
Keywords: Biplot; Cowpea; Genotype by environment interaction; Yield stability
Year: 2022 PMID: 35309407 PMCID: PMC8927922 DOI: 10.1016/j.heliyon.2022.e09013
Source DB: PubMed Journal: Heliyon ISSN: 2405-8440
Figure 1Monthly rainfall, minimum and maximum temperature at the three-test sites. (Source: Ethiopian Meteorology Agency, Awassa branch, 2018).
Cowpea Genotypes tested during 2016–2018 at 12 Environments.
| No | Genotype | Genotype code | Status | Year of release | Source |
|---|---|---|---|---|---|
| 1 | Brazil-1 | G1 | Introduced | - | MARC |
| 2 | Bole | G2 | Released | 2005 | MARC |
| 3 | White wonderer trailing | G3 | Released | 1976 | MARC |
| 4 | Kenketi | G4 | Released (standard check) | 2012 | MARC |
| 5 | Brazil-2 | G5 | Introduced | - | MARC |
| 6 | Brazil-3 | G6 | Introduced | - | MARC |
| 7 | Brazil-4 | G7 | Introduced | - | MARC |
| 8 | KB | G8 | Introduced | - | MARC |
| 9 | BEB | G9 | Released | 1976 | MARC |
| 10 | TVU-1977-DD1 | G10 | Released | 1978 | MARC |
| 11 | Local check | G11 | Farmers seed (local check) | - | Farmers |
| 12 | IT96D-604 | G12 | Advanced line | - | MARC |
| 13 | 93K-619-1 | G13 | Advanced line | - | MARC |
| 14 | IT93K-293-2-2 | G14 | Advanced line | - | MARC |
| 15 | IT99K-1060 | G15 | Advanced line | - | MARC |
| 16 | IT-89KD | G16 | Advanced line | - | MARC |
| 17 | IT97K-499-38 | G17 | Advanced line | - | MARC |
| 18 | IT93K-452-1 | G18 | Advanced line | - | MARC |
| 19 | IT98K-1111-1 | G19 | Advanced line | - | MARC |
| 20 | IT97K-569-9 | G20 | Advanced line | - | MARC |
Note: MARC = Melkasa Agricultural Research center.
Combined and AMMI ANOVA of Grain Yield of 20 Cowpea Genotype grown across 12 Environments.
| Source of variation | DF | SS | MS | VE (%) | % GEI | Cumulative (%) |
|---|---|---|---|---|---|---|
| Treatments (G + E + GEI) | 239 | 153087843 | 640535∗∗∗ | |||
| Genotypes (G) | 19 | 35204932 | 1852891∗∗∗ | 23.0 | ||
| Environments (E) | 11 | 64756683 | 5886971∗∗∗ | 42.3 | ||
| Block | 24 | 785002 | 32708 | |||
| Interactions(GEI) | 209 | 53126227 | 254192∗∗∗ | 34.7 | ||
| IPCA 1 | 29 | 17602987 | 607000∗∗∗ | 33.1 | 33.1 | |
| IPCA 2 | 27 | 13277103 | 491745∗∗∗ | 25.0 | 58.1 | |
| IPCA 3 | 25 | 5747041 | 229882∗∗∗ | 10.8 | 68.9 | |
| IPCA 4 | 23 | 4625852 | 201124∗∗∗ | 8.7 | 77.6 | |
| Residuals | 105 | 11873245 | 113079 | 22.3 | 100.0 | |
| Error | 456 | 15348006 | 33658 |
Note: DF = Degrees of freedom, SS = Sum of squares, MS = Mean Squares, VE (%) = variation explained as % of Treatment SS, % GEI = Percentage of genotype by environment interaction sum of Squares, IPCA = Interaction Principal Component Axis. ∗∗∗, significant at 0.01 probability level.
Mean grain yield (t ha−1) of 20 cowpea genotypes at 12 environments.
| Code | E1 | E2 | E3 | E4 | E5 | E6 | E7 | E8 | E9 | E10 | E11 | E12 | GM |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| G1 | 1.12 | 0.92 | 0.87 | 1.53 | 0.87 | 1.27 | 0.80 | 0.44 | 1.31 | 1.21 | 0.45 | 0.39 | 0.93 |
| G2 | 1.53 | 1.22 | 1.31 | 2.27 | 1.40 | 1.79 | 1.52 | 0.54 | 0.88 | 1.77 | 1.02 | 1.10 | 1.36 |
| G3 | 1.70 | 1.62 | 1.78 | 1.42 | 1.21 | 1.26 | 1.64 | 0.92 | 1.48 | 1.30 | 0.81 | 1.49 | 1.38 |
| G4 | 1.37 | 1.55 | 1.03 | 2.08 | 1.53 | 1.61 | 1.58 | 0.65 | 1.48 | 1.72 | 0.94 | 1.12 | 1.39 |
| G5 | 1.95 | 0.95 | 1.19 | 2.08 | 1.59 | 1.64 | 0.92 | 0.91 | 1.48 | 1.71 | 0.69 | 0.63 | 1.31 |
| G6 | 1.98 | 0.72 | 0.99 | 2.21 | 1.97 | 1.84 | 1.22 | 0.94 | 1.32 | 1.66 | 0.59 | 0.45 | 1.32 |
| G7 | 1.92 | 1.40 | 1.21 | 1.57 | 1.30 | 1.65 | 0.85 | 0.90 | 1.94 | 1.95 | 0.88 | 0.35 | 1.33 |
| G8 | 1.32 | 0.53 | 0.84 | 1.66 | 0.90 | 1.53 | 0.99 | 1.11 | 0.93 | 1.12 | 0.58 | 0.68 | 1.02 |
| G9 | 1.11 | 1.08 | 0.83 | 1.32 | 0.58 | 0.87 | 1.48 | 0.52 | 0.89 | 1.01 | 0.45 | 0.90 | 0.92 |
| G10 | 1.68 | 1.31 | 2.00 | 1.46 | 1.06 | 1.61 | 1.52 | 0.93 | 1.24 | 1.48 | 0.86 | 1.36 | 1.38 |
| G11 | 0.91 | 0.66 | 1.32 | 2.03 | 1.07 | 1.73 | 1.15 | 1.05 | 0.67 | 0.86 | 0.33 | 0.76 | 1.05 |
| G12 | 1.38 | 1.02 | 2.04 | 2.34 | 1.99 | 2.35 | 1.97 | 1.11 | 2.03 | 1.94 | 1.14 | 0.71 | 1.67 |
| G13 | 1.37 | 0.66 | 1.56 | 2.50 | 1.97 | 1.93 | 1.85 | 0.94 | 1.50 | 1.55 | 1.13 | 1.12 | 1.51 |
| G14 | 1.44 | 0.87 | 1.16 | 2.46 | 1.57 | 1.74 | 1.84 | 1.25 | 1.97 | 1.78 | 0.90 | 1.67 | 1.55 |
| G15 | 0.94 | 0.65 | 1.40 | 1.84 | 1.75 | 1.76 | 1.93 | 1.17 | 1.61 | 1.35 | 1.43 | 1.62 | 1.45 |
| G16 | 1.54 | 1.21 | 1.83 | 2.31 | 1.81 | 1.77 | 1.39 | 1.46 | 1.34 | 1.85 | 1.43 | 1.48 | 1.62 |
| G17 | 1.20 | 0.68 | 0.96 | 1.71 | 0.95 | 1.50 | 1.71 | 0.74 | 1.17 | 1.17 | 0.48 | 0.92 | 1.10 |
| G18 | 1.19 | 0.80 | 1.05 | 1.37 | 1.12 | 1.41 | 1.73 | 0.68 | 0.91 | 1.02 | 0.50 | 0.97 | 1.06 |
| G19 | 1.16 | 0.97 | 1.75 | 1.61 | 1.02 | 1.66 | 1.64 | 0.56 | 0.89 | 0.99 | 0.53 | 1.31 | 1.17 |
| G20 | 1.14 | 0.86 | 1.48 | 1.84 | 1.65 | 1.90 | 1.84 | 1.36 | 1.56 | 1.67 | 1.32 | 1.54 | 1.51 |
| EMS | 0.025 | 0.029 | 0.036 | 0.045 | 0.031 | 0.058 | 0.028 | 0.035 | 0.028 | 0.030 | 0.039 | 0.021 | - |
| EM | 1.40 | 0.98 | 1.33 | 1.88 | 1.36 | 1.64 | 1.48 | 0.91 | 1.33 | 1.46 | 0.82 | 1.03 | 1.30 |
| CV | 11.2 | 11.3 | 11.9 | 11.3 | 17.3 | 12.9 | 14.7 | 14.1 | 12.5 | 23.9 | 22 | 14.2 | 14.2 |
| LSD | 0.26∗ | 0.35∗∗ | 0.27∗ | 0.28∗ | 0.28∗ | 0.29∗ | 0.4∗∗ | 0.24∗ | 0.28∗ | 0.33∗ | 0.33∗ | 0.31∗ | - |
| GF | HB | KU | Mean | % | GF | % | HB | % | KU | % | |||
| Meher | 1.64 | 1.17 | 1.49 | 1.43 | 1.64 | 1.17 | 1.49 | ||||||
| Belg | 1.47 | 0.87 | 1.18 | 1.17 | 1.47 | 0.87 | 1.18 | ||||||
Note: GF = Gofa, HB = Humbo, KU = Kucha, EMS = Error mean square, EM = Environmental mean, Environments: E1, E2, E3 (Gofa, Humbo, and Kucha in Meher, 2016), E4, E5, E6 (Gofa, Humbo, and Kucha in Meher, 2017), E7, E8 and E9 (Gofa, Humbo, and Kucha in Belg, 2017), E10, E11 and E12 (Gofa, Humbo, and Kucha in Belg, 2018), GM = Grand Mean.
Figure 2AMMI Bi-plot of IPC2 versus IPCA1.
Mean yield (t ha−1), ASV, GSI of 20 cowpea genotypes tested at 12 environments, and principal component analysis of the AMMI.
| Code | YD | RYD | ASV | RASV | GSI | RGSI | E | IPCA1 | IPCA2 | IPCA3 | IPCA4 | F-value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| G1 | 0.931 | 19 | 14.1 | 9 | 28 | 15 | E1 | -17.2 | 18.7 | -7.3 | -9.3 | 12.6 |
| G2 | 1.363 | 10 | 2.2 | 1 | 11 | 3 | E2 | 0.7 | 29.4 | -1.3 | -6.7 | 10.1 |
| G3 | 1.384 | 8 | 24.7 | 17 | 25 | 14 | E3 | 11.5 | 6.6 | -20.5 | 20.7 | 12.6 |
| G4 | 1.389 | 7 | 5.9 | 4 | 11 | 3 | E4 | -10.1 | -18.1 | -8.3 | -17.1 | 9.9 |
| G5 | 1.311 | 13 | 25.2 | 18 | 31 | 17 | E5 | -10.7 | -16.7 | -0.1 | 1.6 | 17.0 |
| G6 | 1.323 | 12 | 29.2 | 19 | 31 | 17 | E6 | -5.2 | -11.5 | -11.5 | 4.6 | 4.7 |
| G7 | 1.326 | 11 | 34.0 | 20 | 31 | 17 | E7 | 22.4 | -6.5 | 5.0 | -5.8 | 14.8 |
| G8 | 1.015 | 18 | 5.5 | 3 | 21 | 9 | E8 | 1.6 | -5.5 | 0.5 | 4.0 | 7.0 |
| G9 | 0.920 | 20 | 18.1 | 13 | 33 | 20 | E9 | -11.0 | 2.3 | 23.0 | 13.6 | 16.4 |
| G10 | 1.376 | 9 | 19.7 | 14 | 23 | 11 | E10 | -15.5 | 3.4 | 6.9 | -1.2 | 12.3 |
| G11 | 1.045 | 17 | 9.8 | 7 | 24 | 12 | E11 | 4.1 | -4.0 | 8.2 | 5.7 | 8.9 |
| G12 | 1.669 | 1 | 15.6 | 11 | 12 | 5 | E12 | 29.4 | 1.9 | 6.2 | -10.0 | 25.0 |
| G13 | 1.506 | 5 | 17.1 | 12 | 17 | 7 | ||||||
| G14 | 1.554 | 3 | 9.6 | 6 | 9 | 2 | ||||||
| G15 | 1.453 | 6 | 23.1 | 16 | 22 | 10 | ||||||
| G16 | 1.618 | 2 | 3.5 | 2 | 4 | 1 | ||||||
| G17 | 1.099 | 15 | 7.0 | 5 | 20 | 8 | ||||||
| G18 | 1.062 | 16 | 12.6 | 8 | 24 | 12 | ||||||
| G19 | 1.175 | 14 | 20.8 | 15 | 29 | 16 | ||||||
| G20 | 1.512 | 4 | 15.6 | 10 | 14 | 6 | ||||||
| GM |
YD = yield, RYD = Rank by Yield; ASV = AMMI stability value; RASV = Rank by ASV; RGSI = Rank by Genotype Selection Index; GM = Grand mean, E = Environment.
Productivity and Stability (within one STD of IPCA1 and IPCA2) of Genotypes.
| Stability | Yield | |
|---|---|---|
| High | Low | |
| Stable | G2, G4, G14, G16, G20 | G1, G8, G11, G17, G18 |
| Unstable | G3, G5, G6, G7, G10, G12, G13, G15 | G9, G19 |
Figure 3The plot of GIPCA2 vs GIPCA1 for 20 cowpea genotypes tested at 12 Environments.
Figure 4Comparison of genotypes with an ideal genotype.
Classification of Genotypes by Desirability based on rank by GGE1 and GGE2 (GEI).
| Desirability | Classification by Yield and Stability | Genotypes |
|---|---|---|
| 1. Most Desirable | High yielding and Stable | G13, G16, G14, G2, G4 |
| 2. Desirable | High yielding and Unstable | G12, G20, G10, G15, G3, G6, G5, G7 |
| 3. Undesirable | Low yielding and Stable | G11, G17, G8, G9 |
| 4. Most undesirable | Low yielding and Unstable | G18, G19, G1 |